mRNA_M-pyrifera_M_contig12150.4424.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12150.4424.1 vs. uniprot
Match: A0A6H5KPP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP3_9PHAE) HSP 1 Score: 539 bits (1388), Expect = 5.050e-178 Identity = 290/436 (66.51%), Postives = 321/436 (73.62%), Query Frame = 1
Query: 202 RGKVYELPLRAGDESTTVAVRAGNAGVYVVTCVNRQRKTSSCSRTDCQGFRAGFVSQQQTVESHGGVSSAVGSLCAHAKLALKHMTANTMKKATSVRSGGIASRDYDAAKELVTAAKSSSHLTTEEYNDVMSIVEGAERSGVWPVVETERHQYMVLDMRSRTTELDWGSVKLDQVAEGGASRRLTSSRNFMCKA-VKGEA---CTE------------------------NKNKKRSRCVHTLTVAVFSGIGLGSTXXXXXXXXXXXXXXXGGSGVTNTPRMLLDEDAELYRSRLADLLAYLRRFALPSTAPSGLARLSDNPPRRFVVSQTRCTCGGELLAEKDVDGTLVTEAPLIVSVKVERQKCTSCGACAWASDNWRETSVFNYNNYHLVELSLLYKCLDQFITGTTIQSFFVAHLGPLKKNIGWLRENPDLA 1425
RGKVY+LP R GDESTTVAVRAGNAGVYV TCVNRQRKTSSCSRT+CQG AGFVSQQ+TV SHGGV+SAVG LC HA LAL+HM A TMK+ATSV GG+AS DY AAKELVTAAK SHLT EE NDVMSIVEGAERSGVWPVVE ERHQYMVLDMRSRTTELDWGSVK DQV+EG ASRR++SSR+FMCK + +A C++ ++ R HTL VAVFS IGL S GGS + TP++ LD DAE Y S+LAD+L Y+RR ALP TAPSGLARLS+ P RR +VSQT+CTCGGELL E DV TLV E VER+KC +CGACAWASDNWR+TSVFNYN Y LV+LSLLYKCL QFI GTTIQSFF +HL PL NIGWL ENPDLA
Sbjct: 45 RGKVYQLPWRTGDESTTVAVRAGNAGVYVATCVNRQRKTSSCSRTECQGATAGFVSQQRTVGSHGGVASAVGGLCQHAALALEHMAAKTMKRATSVL-GGVASTDYAAAKELVTAAKLGSHLTAEECNDVMSIVEGAERSGVWPVVEVERHQYMVLDMRSRTTELDWGSVKFDQVSEGEASRRMSSSRHFMCKVFLDSDAESYCSKLADMLTYMRRLALPPTAPSGLARLSETPARRLXAHTLVVAVFSRIGLDSMASSTGEGGAAEDASSGGSALPRTPQVFLDSDAESYCSKLADMLTYMRRLALPPTAPSGLARLSETPARRLMVSQTKCTCGGELLPEADVIATLVME--------VERRKCGACGACAWASDNWRKTSVFNYNKYFLVDLSLLYKCLGQFIRGTTIQSFFFSHLEPLTTNIGWLSENPDLA 471
BLAST of mRNA_M-pyrifera_M_contig12150.4424.1 vs. uniprot
Match: D7G2H3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H3_ECTSI) HSP 1 Score: 344 bits (883), Expect = 7.910e-114 Identity = 179/240 (74.58%), Postives = 195/240 (81.25%), Query Frame = 1
Query: 454 MTANTMKKATSVRSGGIASRDYDAAKELVTAAKSSSHLTTEEYNDVMSIVEGAERSGVWPVVETERHQYMVLDMRSRTTELDWGSVKLDQVAEGGASRRLTSSRNFMCKAVKGEACTENKNKKRSRCVHTLTVAVFSGIGLGSTXXXXXXXXXXXXXXXGGSGVTNTPRMLLDEDAELYRSRLADLLAYLRRFALPSTAPSGLARLSDNPPRRFVVSQTRCTCGGELLAEKDVDGTLVTE 1173
M ANTMK+ATSV GG++SRDY AAKELVTAAK SHLT EE NDVMSIVEGAERSGVWPVVETERHQYMVLDMRSRTTELDWGSVK DQV+EG ASRR+TSSR+FMCKAVKGEACTENKNKKR+RC HTL VAVFS IGL ST GGS + TP++ LD DAE Y S+LAD+L Y+RR ALP TAPSGLARLS+ P RR VVSQT+CTCGGELL E DV+ TLVTE
Sbjct: 1 MAANTMKRATSVL-GGVSSRDYAAAKELVTAAKLGSHLTAEECNDVMSIVEGAERSGVWPVVETERHQYMVLDMRSRTTELDWGSVKFDQVSEGEASRRMTSSRHFMCKAVKGEACTENKNKKRARCAHTLVVAVFSRIGLDSTASSTGEGGAAAGASSGGSALPRTPQVFLDSDAESYCSKLADMLTYMRRLALPPTAPSGLARLSETPARRLVVSQTKCTCGGELLPEADVNATLVTE 239
BLAST of mRNA_M-pyrifera_M_contig12150.4424.1 vs. uniprot
Match: A0A6H5JLK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK4_9PHAE) HSP 1 Score: 293 bits (751), Expect = 6.060e-94 Identity = 162/273 (59.34%), Postives = 185/273 (67.77%), Query Frame = 1
Query: 592 MSIVEGAERSGVWPVVETERHQYMVLDMRSRTTELDWGSVKLDQVAEGGASRRLTSSRNFMCKAVKGEACTENKNKKRSRCVHTLTVAVFSGI----GLGSTXXXXXXXXXXXXXXXGGSGVTNTPRMLLDEDAELYRSRLADLLAYLRRFALPSTAPSGLARLSDNPPRRFVVSQTRCTCGGELLAEKDVDGTLVTEAPLIVSVKVERQKCTSCGACAWASDNWRETSVFNYNNYHLVELSLLYKCLDQFITGTTIQSFFVAHLGPLKKNIG 1398
MSI+EGAERSGVWPVV TERHQYMVLDMRSRTTELD GS+K DQV+EG ASRR+TSSR+FMCK RC F G+ G GS+ G + TPR+ LD DAE + S+LAD+L Y+RR ALP TAPSGLAR+S P RR VVSQT+CTCGGELL E DV+ TLVTE VER+KC +CGACAWASDN R+TSVFN NY LV+LSLLYKC QFI GTTIQSFF +H+ PL N+G
Sbjct: 1 MSIMEGAERSGVWPVVVTERHQYMVLDMRSRTTELDQGSIKFDQVSEGEASRRVTSSRHFMCKV----------RAHLGRCCLFPHWVGFDGVEHRRGWGSSGCFF-----------GWLSLPRTPRVFLDSDAESFCSKLADMLTYMRRLALPPTAPSGLARISVTPARRLVVSQTKCTCGGELLPEADVNATLVTE--------VERRKCGTCGACAWASDNLRKTSVFNLKNYFLVKLSLLYKCFGQFIRGTTIQSFFFSHVEPLTTNVG 244
BLAST of mRNA_M-pyrifera_M_contig12150.4424.1 vs. uniprot
Match: D8LSV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSV9_ECTSI) HSP 1 Score: 207 bits (528), Expect = 4.900e-60 Identity = 109/193 (56.48%), Postives = 138/193 (71.50%), Query Frame = 1
Query: 202 RGKVYELPLRAGDESTTVAVRAGNAGVYVVTCVNRQRKTSSCSRTDCQGFRAGFVSQQQTVESHGGVSSAVGSLCAHAKLALKHMTANTMKKATSVRSGGIASRDYDAAKELVTAAKSSSHLTTEEYNDVMSIVEGAERSGVWPVVETERHQYMVLDMRSRTTELDWGSVKLDQVAEGGASRRLTSSRNFMCK 780
R +V++LP GD+STTVAVR GNA +V+T VN +R+TSSCSRT CQG RAG V+QQQT SHGGV+SA+G LC HAK AL+HM T+K A V+ G D+DAAKE V AKS HL+ E+ +M++VE AE SGVWPV ETE + ++V D R+RT+E D+ VK D V G +SRRLT +NFMC+
Sbjct: 96 RQRVFKLPRGNGDQSTTVAVRLGNADNWVITSVNPERQTSSCSRTQCQGLRAGLVAQQQTAGSHGGVASAIGGLCKHAKAALEHMRKKTVKDAREVKGDGW---DWDAAKEHVATAKSDGHLSVVEHTAIMTMVERAEGSGVWPVYETEPNHFVVRDDRTRTSEHDYACVKYDTVEPGKSSRRLTPPKNFMCR 285
BLAST of mRNA_M-pyrifera_M_contig12150.4424.1 vs. uniprot
Match: D7FR12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR12_ECTSI) HSP 1 Score: 206 bits (523), Expect = 2.120e-59 Identity = 108/190 (56.84%), Postives = 136/190 (71.58%), Query Frame = 1
Query: 211 VYELPLRAGDESTTVAVRAGNAGVYVVTCVNRQRKTSSCSRTDCQGFRAGFVSQQQTVESHGGVSSAVGSLCAHAKLALKHMTANTMKKATSVRSGGIASRDYDAAKELVTAAKSSSHLTTEEYNDVMSIVEGAERSGVWPVVETERHQYMVLDMRSRTTELDWGSVKLDQVAEGGASRRLTSSRNFMCK 780
V++LP GD+STTVAVR GNA +V+T VN +R+TSSCSRT CQG RAG V+QQQT SHGGV+SA+G LC HAK AL+HM T+K A V+ G D+DAAKE V AKS HL+ E+ +M++VE AE SGVWPV ETE + ++V D R+RT+E D+ VK D V G +SRRLT +NFMC+
Sbjct: 63 VFKLPRGNGDQSTTVAVRLGNADNWVITSVNPERQTSSCSRTQCQGLRAGLVAQQQTAGSHGGVASAIGGLCKHAKAALEHMRKKTVKDAREVKGDGW---DWDAAKEHVATAKSDGHLSVVEHTVIMTMVERAEGSGVWPVYETEPNHFVVRDDRTRTSEHDYACVKYDTVEPGKSSRRLTPPKNFMCR 249
BLAST of mRNA_M-pyrifera_M_contig12150.4424.1 vs. uniprot
Match: D7FR86_ECTSI (Autophagy protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR86_ECTSI) HSP 1 Score: 194 bits (492), Expect = 2.910e-52 Identity = 108/194 (55.67%), Postives = 118/194 (60.82%), Query Frame = 1
Query: 592 MSIVEGAERSGVWPVVETERHQYMVLDMRSRTTELDWGSVKLDQVAEGGASRRLTSSRNFMCKAVKGEACTENKNKKRSRCVHTLTVAVFSGIGLGSTXXXXXXXXXXXXXXXGGSGVTNTPRMLLDEDAELYRSRLADLLAYLRRFALPSTAPSGLARLSDNPPRRFVVSQTRCTCGGELLAEKDVDGTLVTE 1173
MSIVEGAERSGVWPVVETERHQYMVLDMRSRTTELDWGSVK DQV+EG SRR+TSSR+FMCK + LD DAE Y S+LAD+L Y+RR ALP TAPSGLARLS+ P RR VVSQT+CTCGGELL E DV+ TLVTE
Sbjct: 1 MSIVEGAERSGVWPVVETERHQYMVLDMRSRTTELDWGSVKFDQVSEGEGSRRMTSSRHFMCK------------------------------------------------------------VFLDSDAESYCSKLADMLTYMRRLALPPTAPSGLARLSETPARRLVVSQTKCTCGGELLPEADVNATLVTE 134
BLAST of mRNA_M-pyrifera_M_contig12150.4424.1 vs. uniprot
Match: A0A6H5JPP3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP3_9PHAE) HSP 1 Score: 187 bits (474), Expect = 3.430e-48 Identity = 122/362 (33.70%), Postives = 182/362 (50.28%), Query Frame = 1
Query: 367 SQQQTVESHGGVSSAVGSLCAHAKLALKHMTANTMKKATSVRSGGIASRDYDAAKELVTAAKSSSHLTTEEYNDVMSIVEGAERSGVWPVVETERHQYMVLDMRSRTTELDWGSVKLDQVAEGGASRRLTSSRNFMCKAVKGEACTENKNKKRSRCVHTLTVAVFSGIGLGSTXXXXXXXXXXXXXXXGGSGVTNTPRMLLDEDAELYRSRLADLLAYLRRFALPSTAPSGLAR----LSDNPPRRFVVSQTRCT-CGGELLAEKD--VDGTLVTEAPLIVSVKVERQKCTSCGACAWASDNWRETSVFNYNNYHLVELSLLYKCLDQFITGTTIQSFFVAHLGPLKKNIGWLRENPDLADR 1431
S +T ++ GV SA G +C HA +L+ + NT+ AT + GI + ++ A++ + L+ E ++ +V A+ GV+PVV+ + Y V + RS ASR++T++R MCKA +G C+E + K R +C+HTL VA+ G G T + +LD+DA YR LA+ L + P P GL R + N + SQ C+ CG + AE V T +TE P + V V +C +CG +A+DNWRET +FNYNN +LVELS+LY+CL+ F GTTI + F L PL ++ W++ NPDL+ R
Sbjct: 7 SVSRTAGANAGVQSATGGICEHAAASLEALDKNTVVNATPIFFNGINGCPHAGLTACISQARAKAFLSEVEETLLLGMVAEAKDVGVYPVVQLSKWGYAVSERRSDGKXXXXXXX---------ASRKITAARGLMCKANRGGPCSEFEKKNR-KCLHTLVVALALWQEEGMRDEGLGVEQVDVDGGRIPDGTPRTAQKMLDKDAPAYRKCLANCLNTMSVIKFPENLPFGLGRRGATTNANASITYTTSQKTCSGCGRDFPAESQHSVVPTRLTEGPGMSKVNVHTNECETCGIHGFANDNWRETGLFNYNNSYLVELSILYRCLEAFTRGTTICAVFETFLEPLASDLVWIKANPDLSKR 358
BLAST of mRNA_M-pyrifera_M_contig12150.4424.1 vs. uniprot
Match: A0A6H5JWX4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWX4_9PHAE) HSP 1 Score: 182 bits (461), Expect = 3.150e-47 Identity = 124/373 (33.24%), Postives = 181/373 (48.53%), Query Frame = 1
Query: 367 SQQQTVESHGGVSSAVGSLCAHAKLALKHMTANTMKKATSVRSGGIASRDYDAAKELVTAAKSSSHLTTEEYNDVMSIVEGAERSGVWPVVETERHQYMVLDMRS--RTTELDWGSVKLDQVAEGGASRRLTSSRNFMCKAVKGEACTENKNKKRSRCVHTLTVAVF---------SGIGLGSTXXXXXXXXXXXXXXXGGSGVTNTPRMLLDEDAELYRSRLADLLAYLRRFALPSTAPSGLAR----LSDNPPRRFVVSQTRCT-CGGELLAEKD--VDGTLVTEAPLIVSVKVERQKCTSCGACAWASDNWRETSVFNYNNYHLVELSLLYKCLDQFITGTTIQSFFVAHLGPLKKNIGWLRENPDLADR 1431
S QT ++ GV SA G++C HA +L+ + NT+ AT + GI Y ++ A++ + L+ E ++ +V A+ GV+PVV+ Y V + R + V+ D G MCKA +G C+E + K R +C+HTL VA+ G+G+G G T + +LD+DA YR LA+ L + + P P GL R + N + SQ C+ CG + E V T +TE P + V V +C +CG ASDNWRET +FNYNN +LVELS+LY+CL+ F GTTI +FF L PL ++ W++ NPDL+ R
Sbjct: 7 SVSQTAGANAGVQSATGAICEHAAASLEALDKNTVVDATPIFFNGINGCPYAGLTACISQARAKAFLSEVEETLLVGMVAEAKDIGVYPVVQLGEWGYAVSERRRWRQGXXXXXXRVEEDHCCPG-----------LMCKANRGGPCSEYEKKDR-KCLHTLVVALALWQEEGMRDEGLGVGQVDMDGGRIP---------DGTPRTAQKMLDKDAPAYRKGLANCLNTMSVYKFPENLPFGLGRRGATTNANASITYTTSQKTCSGCGRDFHTENQHTVVATRLTEGPGMSKVNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVELSVLYRCLEAFTRGTTISAFFETFLEPLASDLVWIKANPDLSKR 358
BLAST of mRNA_M-pyrifera_M_contig12150.4424.1 vs. uniprot
Match: A0A6H5L0Y4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y4_9PHAE) HSP 1 Score: 142 bits (358), Expect = 7.670e-36 Identity = 87/243 (35.80%), Postives = 124/243 (51.03%), Query Frame = 1
Query: 751 LTSSRNFMCKAVKGEACTENKNKKRSRCVHTLTVAVF---------SGIGLGSTXXXXXXXXXXXXXXXGGSGVTNTPRMLLDEDAELYRSRLADLLAYLRRFALPSTAPSGLAR----LSDNPPRRFVVSQTRCT-CGGELLAEKD--VDGTLVTEAPLIVSVKVERQKCTSCGACAWASDNWRETSVFNYNNYHLVELSLLYKCLDQFITGTTIQSFFVAHLGPLKKNIGWLRENPDLADR 1431
+ +S + +A +G C+E + K R +C+HTL VA+ G+G+G G T + +LD+DA YR LA+ L + + P P GL R + N + SQ C+ CG + E V T +TE P + V V +C +CG ASDNWRET +FNYNN +LVELS+LY+CL+ F GTTI +FF L PL ++ W++ NPDL+ R
Sbjct: 1 MHTSHMYPAQANRGGPCSEYEKKNR-KCLHTLVVALALWHEEGMRDEGLGVGQVDVDGDRTP---------DGTPRTAQKMLDKDAPAYRKGLANCLNTMSVYKFPENLPFGLGRRGATTNANASITYTTSQKTCSGCGRDFPTENQHTVVATRLTEGPGMSKVNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVELSVLYRCLEAFTRGTTIGAFFETFLEPLGSDLVWIKANPDLSKR 233
BLAST of mRNA_M-pyrifera_M_contig12150.4424.1 vs. uniprot
Match: A0A6H5K6Y4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y4_9PHAE) HSP 1 Score: 146 bits (368), Expect = 1.360e-34 Identity = 97/288 (33.68%), Postives = 135/288 (46.88%), Query Frame = 1
Query: 622 GVWPVVETERHQYMVLDMRSRTTELDWGSVKL--DQVAEGGASRRLTSSRNFMCKAVKGEACTENKNKKRSRCVHTLTVAVF---------SGIGLGSTXXXXXXXXXXXXXXXGGSGVTNTPRMLLDEDAELYRSRLADLLAYLRRFALPSTAPSGLAR----LSDNPPRRFVVSQTRCT-CGGELLAEKD--VDGTLVTEAPLIVSVKVERQKCTSCGACAWASDNWRETSVFNYNNYHLVELSLLYKCLDQFITGTTIQSFFVAHLGPLKKNIGWLRENPDLADR 1431
GV+PVV+ Y V + R ++ D G MCK +G C+E + K R +C+HTL VA+ G+G+G G T + +LD+DA YR LA+ L + + P P GL R + N + SQ C+ CG + V T +TE P + V V +C +CG ASDNWRET +FNYNN +LVELS+LY+CL+ F GTTI +FF L PL ++ W++ NPDL+ R
Sbjct: 9 GVYPVVQLGEWGYAVSERRRXXXXXXXXXXRVEEDHCYPG-----------LMCKVNRGGPCSEYEKKNR-KCLHTLVVALALWQEEGMRDEGLGVGQVDVDGGRIP---------DGTPRTAQKMLDKDAPAYRKGLANCLNTMSVYKFPENLPFGLGRRGATTNANTSITYTTSQKTCSGCGRDFPTGNQYIVVATRLTEGPGMSKVNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVELSILYRCLEAFTRGTTISAFFETFLEPLASDLVWIKANPDLSTR 275 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12150.4424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12150.4424.1 >prot_M-pyrifera_M_contig12150.4424.1 ID=prot_M-pyrifera_M_contig12150.4424.1|Name=mRNA_M-pyrifera_M_contig12150.4424.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=478bp MHHQSLKGACRCHSCNTTKRKAVEARGGGGAGAGRGRGHGRGGASQSGQGback to top mRNA from alignment at M-pyrifera_M_contig12150:1..3031+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12150.4424.1 ID=mRNA_M-pyrifera_M_contig12150.4424.1|Name=mRNA_M-pyrifera_M_contig12150.4424.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3031bp|location=Sequence derived from alignment at M-pyrifera_M_contig12150:1..3031+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12150:1..3031+ >mRNA_M-pyrifera_M_contig12150.4424.1 ID=mRNA_M-pyrifera_M_contig12150.4424.1|Name=mRNA_M-pyrifera_M_contig12150.4424.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2868bp|location=Sequence derived from alignment at M-pyrifera_M_contig12150:1..3031+ (Macrocystis pyrifera P11B4 male)back to top |