mRNA_M-pyrifera_M_contig12110.4346.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12110.4346.1 vs. uniprot
Match: D7G1Z1_ECTSI (C2H2 and CCCH zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z1_ECTSI) HSP 1 Score: 148 bits (373), Expect = 1.090e-43 Identity = 69/93 (74.19%), Postives = 78/93 (83.87%), Query Frame = 1
Query: 1 TSTLSTIYSQHEAHYETCHRNLCSTCGSSFPTHRLLDLHLSELHDSFFKAMAERRPMYVCLVEGCPDVFESSKKRHGHLVGVHRYPKSFDFTR 279
T+T S++ +HE HYET HR+ C TCG SFPTHRLLDLHLSE HDSFF+AMAERRPMY CLVEGCP+VFESS KRH HLV H YP+SFDF+R
Sbjct: 71 TATFSSL-KRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCPEVFESSGKRHEHLVEAHLYPESFDFSR 162
BLAST of mRNA_M-pyrifera_M_contig12110.4346.1 vs. uniprot
Match: A0A836CFJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ7_9STRA) HSP 1 Score: 115 bits (288), Expect = 6.680e-29 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 1
Query: 40 HYETCHRNLCSTCGSSFPTHRLLDLHLSELHDSFFKAMAERRPMYVCLVEGCPDVFESSKKRHGHLVGVHRYPKSFDFTR 279
HY+T HR+ C+TCG +F T RLLDLHLSELHDS+FKAMAE+R MY CLVEGC F+ + R H++ VH YP++FDF R
Sbjct: 114 HYDTSHRHTCATCGRAFITPRLLDLHLSELHDSYFKAMAEKRHMYECLVEGCGKKFKDNNGRRAHMIAVHHYPRAFDFHR 193
BLAST of mRNA_M-pyrifera_M_contig12110.4346.1 vs. uniprot
Match: A0A7L1YQP1_9PASS (ZN511 protein (Fragment) n=1 Tax=Scytalopus superciliaris TaxID=312124 RepID=A0A7L1YQP1_9PASS) HSP 1 Score: 108 bits (269), Expect = 2.260e-27 Identity = 49/83 (59.04%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 31 HEAHYETCHRNLCSTCGSSFPTHRLLDLHLSELHDSFFKAMAERRPMYVCLVEGCPDVFESSKKRHGHLVGVHRYPKSFDFTR 279
+E HY + HRN+CS C SFP+ LLD+H+SE HDS F+ MAE++ MY CLVEGCP+ F SSK R HLV VH YP F F R
Sbjct: 47 YEHHYNSLHRNVCSFCKRSFPSGTLLDIHISEWHDSLFQVMAEKQNMYKCLVEGCPEKFRSSKDRKDHLVTVHLYPADFRFDR 129
BLAST of mRNA_M-pyrifera_M_contig12110.4346.1 vs. uniprot
Match: A0A329T424_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T424_9STRA) HSP 1 Score: 108 bits (269), Expect = 7.490e-27 Identity = 44/81 (54.32%), Postives = 61/81 (75.31%), Query Frame = 1
Query: 31 HEAHYETCHRNLCSTCGSSFPTHRLLDLHLSELHDSFFKAMAERRPMYVCLVEGCPDVFESSKKRHGHLVGVHRYPKSFDF 273
+E HYE HRN+C C SF + RLLD+H+SE HD+FFK +++++PMYVCLV+GC + F+ KR HL+ VH+YP+SF F
Sbjct: 74 YEEHYEMVHRNICRECSRSFLSLRLLDIHISETHDAFFKILSKKKPMYVCLVDGCSETFQHDNKRTRHLIQVHQYPESFSF 154
BLAST of mRNA_M-pyrifera_M_contig12110.4346.1 vs. uniprot
Match: A0A7K7VNZ4_EUDEL (ZN511 protein (Fragment) n=1 Tax=Eudromia elegans TaxID=8805 RepID=A0A7K7VNZ4_EUDEL) HSP 1 Score: 106 bits (265), Expect = 8.780e-27 Identity = 48/83 (57.83%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 31 HEAHYETCHRNLCSTCGSSFPTHRLLDLHLSELHDSFFKAMAERRPMYVCLVEGCPDVFESSKKRHGHLVGVHRYPKSFDFTR 279
+E HY HRN+CS+C SFP+ RLLD+HLSE HDS F+ +AE++ MY CLVEGC + F+SSK R HLV VH YP F F +
Sbjct: 47 YEHHYNALHRNVCSSCKRSFPSGRLLDIHLSEWHDSLFQVLAEKQNMYKCLVEGCTEKFKSSKDRKEHLVTVHLYPADFRFDK 129
BLAST of mRNA_M-pyrifera_M_contig12110.4346.1 vs. uniprot
Match: A0A7L3X8A3_9AVES (ZN511 protein (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7L3X8A3_9AVES) HSP 1 Score: 107 bits (268), Expect = 1.030e-26 Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 31 HEAHYETCHRNLCSTCGSSFPTHRLLDLHLSELHDSFFKAMAERRPMYVCLVEGCPDVFESSKKRHGHLVGVHRYPKSFDFTR 279
+E HY T HRN+CS C SFP+ LLD+H+SE HDS F+ MAE++ MY CLVEGC + F+SSK+R HLV VH YP F F R
Sbjct: 98 YEHHYNTLHRNVCSFCKRSFPSGHLLDIHISEWHDSLFQIMAEKQNMYKCLVEGCAEKFKSSKERKDHLVTVHLYPADFRFDR 180
BLAST of mRNA_M-pyrifera_M_contig12110.4346.1 vs. uniprot
Match: G4YTN0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YTN0_PHYSP) HSP 1 Score: 107 bits (267), Expect = 1.110e-26 Identity = 43/81 (53.09%), Postives = 61/81 (75.31%), Query Frame = 1
Query: 31 HEAHYETCHRNLCSTCGSSFPTHRLLDLHLSELHDSFFKAMAERRPMYVCLVEGCPDVFESSKKRHGHLVGVHRYPKSFDF 273
+E HY+ HRN+C C SF + RLLD+H+SE HD+FFK +++++P+YVCLV+GCP F+ KR HL+ VH+YP+SF F
Sbjct: 64 YEEHYDMLHRNICRECSRSFLSLRLLDIHISETHDAFFKILSKKKPLYVCLVDGCPKTFQHDDKRTRHLIQVHQYPESFSF 144
BLAST of mRNA_M-pyrifera_M_contig12110.4346.1 vs. uniprot
Match: A0A833WQA5_PHYIN (Putative C2H2-type domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WQA5_PHYIN) HSP 1 Score: 107 bits (266), Expect = 1.850e-26 Identity = 43/83 (51.81%), Postives = 62/83 (74.70%), Query Frame = 1
Query: 25 SQHEAHYETCHRNLCSTCGSSFPTHRLLDLHLSELHDSFFKAMAERRPMYVCLVEGCPDVFESSKKRHGHLVGVHRYPKSFDF 273
S +E HY+ HRN+C C SF + RLLD+H+SE HD++FK +++++PMYVCLV+GCP+ F+ KR HL+ VH+YP +F F
Sbjct: 72 SAYEEHYDMMHRNICRECSRSFLSLRLLDIHISETHDAYFKILSKKKPMYVCLVDGCPETFQHDDKRTEHLIRVHQYPGTFSF 154
BLAST of mRNA_M-pyrifera_M_contig12110.4346.1 vs. uniprot
Match: A0A7K9F391_STEPR (ZN511 protein (Fragment) n=9 Tax=Charadriiformes TaxID=8906 RepID=A0A7K9F391_STEPR) HSP 1 Score: 107 bits (266), Expect = 2.310e-26 Identity = 49/83 (59.04%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 31 HEAHYETCHRNLCSTCGSSFPTHRLLDLHLSELHDSFFKAMAERRPMYVCLVEGCPDVFESSKKRHGHLVGVHRYPKSFDFTR 279
+E HY T HRN+CS C SFP+ LLD+H+SE HDS F+ MAE++ MY CLVEGC + F+SSK R HLV VH YP F F R
Sbjct: 104 YEHHYNTLHRNVCSFCKRSFPSGHLLDIHISEWHDSLFQIMAEKQNMYKCLVEGCAEKFKSSKDRKDHLVTVHLYPADFRFDR 186
BLAST of mRNA_M-pyrifera_M_contig12110.4346.1 vs. uniprot
Match: A0A852KRB1_UROIN (ZN511 protein (Fragment) n=2 Tax=Coliidae TaxID=57385 RepID=A0A852KRB1_UROIN) HSP 1 Score: 105 bits (262), Expect = 2.660e-26 Identity = 48/83 (57.83%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 31 HEAHYETCHRNLCSTCGSSFPTHRLLDLHLSELHDSFFKAMAERRPMYVCLVEGCPDVFESSKKRHGHLVGVHRYPKSFDFTR 279
+E HY T HRN+CS C SFP+ LLD+H+SE HDS F+ +AE++ MY CLVEGC + F SSK R HLV VH YP F F R
Sbjct: 47 YEHHYNTLHRNVCSFCKCSFPSGHLLDIHISEWHDSLFQILAEKQNMYKCLVEGCAEKFRSSKDRKDHLVTVHLYPADFRFDR 129 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12110.4346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12110.4346.1 >prot_M-pyrifera_M_contig12110.4346.1 ID=prot_M-pyrifera_M_contig12110.4346.1|Name=mRNA_M-pyrifera_M_contig12110.4346.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp TSTLSTIYSQHEAHYETCHRNLCSTCGSSFPTHRLLDLHLSELHDSFFKAback to top mRNA from alignment at M-pyrifera_M_contig12110:369..647+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12110.4346.1 ID=mRNA_M-pyrifera_M_contig12110.4346.1|Name=mRNA_M-pyrifera_M_contig12110.4346.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=279bp|location=Sequence derived from alignment at M-pyrifera_M_contig12110:369..647+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12110:369..647+ >mRNA_M-pyrifera_M_contig12110.4346.1 ID=mRNA_M-pyrifera_M_contig12110.4346.1|Name=mRNA_M-pyrifera_M_contig12110.4346.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig12110:369..647+ (Macrocystis pyrifera P11B4 male)back to top |