prot_M-pyrifera_M_contig120839.4290.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120839.4290.1
Unique Nameprot_M-pyrifera_M_contig120839.4290.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length130
Homology
BLAST of mRNA_M-pyrifera_M_contig120839.4290.1 vs. uniprot
Match: A0A2D6U7K9_9ACTN (Translation initiation factor IF-3 n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U7K9_9ACTN)

HSP 1 Score: 174 bits (441), Expect = 7.210e-53
Identity = 85/105 (80.95%), Postives = 96/105 (91.43%), Query Frame = 0
Query:   26 IAPQNDEPRINDRIRAREVRLIGHDGEQIGVKTLPEAQNIARASGLDLVEVAPEAKPPVCKVMDYSKFKYEANQRAKESKKKSSNLSVKEMKYRPKIGPGDFDTK 130
            +AP ++EPRINDRIRAREVRL+G DGEQIG+K LP A NIARA+GLDLVEVA  A PPVC++MDY KFKYEA+QRAKES+KKSSNL+VKEMKYRPKIGPGDFDTK
Sbjct:    1 MAPPSNEPRINDRIRAREVRLVGQDGEQIGIKPLPXALNIARAAGLDLVEVADRANPPVCRIMDYGKFKYEADQRAKESRKKSSNLTVKEMKYRPKIGPGDFDTK 105          
BLAST of mRNA_M-pyrifera_M_contig120839.4290.1 vs. uniprot
Match: A0A7X5WT69_9ACTN (Translation initiation factor IF-3 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WT69_9ACTN)

HSP 1 Score: 163 bits (412), Expect = 1.220e-48
Identity = 80/96 (83.33%), Postives = 89/96 (92.71%), Query Frame = 0
Query:   35 INDRIRAREVRLIGHDGEQIGVKTLPEAQNIARASGLDLVEVAPEAKPPVCKVMDYSKFKYEANQRAKESKKKSSNLSVKEMKYRPKIGPGDFDTK 130
            +NDRIRAREVRL+G DGEQIG+K LPEA NIARASGLDLVEVA +A PPVC++MDY K+KYEA QRAKES+KKSSNL+VKEMKYRPKIGPGDFDTK
Sbjct:    1 MNDRIRAREVRLVGPDGEQIGIKPLPEALNIARASGLDLVEVAEQASPPVCRIMDYGKYKYEAAQRAKESRKKSSNLTVKEMKYRPKIGPGDFDTK 96          
BLAST of mRNA_M-pyrifera_M_contig120839.4290.1 vs. uniprot
Match: A0A2E9XA01_9ACTN (Translation initiation factor IF-3 n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A2E9XA01_9ACTN)

HSP 1 Score: 152 bits (384), Expect = 2.210e-44
Identity = 75/103 (72.82%), Postives = 86/103 (83.50%), Query Frame = 0
Query:   28 PQNDEPRINDRIRAREVRLIGHDGEQIGVKTLPEAQNIARASGLDLVEVAPEAKPPVCKVMDYSKFKYEANQRAKESKKKSSNLSVKEMKYRPKIGPGDFDTK 130
            P+  E RIND IRAREVRL+  DGEQIG+K LPEA NIAR   LDLVEVA +A PPVC++MDY KFKYE +QRAKES+KKS ++S+KEMKYRPKIG GDFDTK
Sbjct:    4 PEEGEARINDEIRAREVRLVAPDGEQIGIKPLPEALNIARGLDLDLVEVAAQANPPVCRIMDYGKFKYETSQRAKESRKKSGSVSLKEMKYRPKIGQGDFDTK 106          
BLAST of mRNA_M-pyrifera_M_contig120839.4290.1 vs. uniprot
Match: A0A6L7JQH4_9ACTN (Translation initiation factor IF-3 n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L7JQH4_9ACTN)

HSP 1 Score: 152 bits (384), Expect = 2.890e-44
Identity = 72/99 (72.73%), Postives = 88/99 (88.89%), Query Frame = 0
Query:   32 EPRINDRIRAREVRLIGHDGEQIGVKTLPEAQNIARASGLDLVEVAPEAKPPVCKVMDYSKFKYEANQRAKESKKKSSNLSVKEMKYRPKIGPGDFDTK 130
            EPRINDRIRAREVRL+G DG+QIG++ LPEA ++AR +GLDLVEVA +  PPVC++MDY K+KYEA QRAKES++ S+N+ VKEMKYRPKIGPGDF+TK
Sbjct:    7 EPRINDRIRAREVRLVGQDGQQIGIRLLPEALDMAREAGLDLVEVADKENPPVCRIMDYGKYKYEAAQRAKESRRNSTNIIVKEMKYRPKIGPGDFETK 105          
BLAST of mRNA_M-pyrifera_M_contig120839.4290.1 vs. uniprot
Match: A0A2E7XBA5_9ACTN (Translation initiation factor IF-3 n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E7XBA5_9ACTN)

HSP 1 Score: 154 bits (388), Expect = 4.570e-44
Identity = 84/132 (63.64%), Postives = 103/132 (78.03%), Query Frame = 0
Query:    1 FSARKRGGGYHANQRR-FRAHKDFRAIA-PQNDEPRINDRIRAREVRLIGHDGEQIGVKTLPEAQNIARASGLDLVEVAPEAKPPVCKVMDYSKFKYEANQRAKESKKKSSNLSVKEMKYRPKIGPGDFDTK 130
            F    RGG   ++Q R  R  ++ RAIA P N EPRINDRIRAREVRL+G +G+QIGV+ LPEA  +A    LDLVEVA +A PPVC++MDY K+KYE +QRAKES+KK++++ VKEMKYRPKIGPGDFDTK
Sbjct:    2 FDIGSRGGVPISHQERNLRDAQERRAIATPANQEPRINDRIRAREVRLVGPEGDQIGVRPLPEAIAMAHDLDLDLVEVADKADPPVCRIMDYGKYKYEQSQRAKESRKKATHILVKEMKYRPKIGPGDFDTK 133          
BLAST of mRNA_M-pyrifera_M_contig120839.4290.1 vs. uniprot
Match: A0A2E8LII8_9ACTN (Translation initiation factor IF-3 (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LII8_9ACTN)

HSP 1 Score: 151 bits (382), Expect = 5.970e-44
Identity = 73/103 (70.87%), Postives = 89/103 (86.41%), Query Frame = 0
Query:   28 PQNDEPRINDRIRAREVRLIGHDGEQIGVKTLPEAQNIARASGLDLVEVAPEAKPPVCKVMDYSKFKYEANQRAKESKKKSSNLSVKEMKYRPKIGPGDFDTK 130
            P N EPR+NDRIRAREVRL+G DG+QIG++ LPEA  +A   GLDLVEVA +A PPVC++MDY K+KYE +QRAKES+KK++++SVKEMKYRPKIGPGDF TK
Sbjct:    4 PANQEPRVNDRIRAREVRLVGPDGDQIGIRPLPEAIAMAGDLGLDLVEVADKADPPVCRIMDYGKYKYEQSQRAKESRKKATHISVKEMKYRPKIGPGDFATK 106          
BLAST of mRNA_M-pyrifera_M_contig120839.4290.1 vs. uniprot
Match: A0A2N5JYK6_9ACTN (Translation initiation factor IF-3 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5JYK6_9ACTN)

HSP 1 Score: 151 bits (382), Expect = 1.090e-43
Identity = 74/99 (74.75%), Postives = 87/99 (87.88%), Query Frame = 0
Query:   32 EPRINDRIRAREVRLIGHDGEQIGVKTLPEAQNIARASGLDLVEVAPEAKPPVCKVMDYSKFKYEANQRAKESKKKSSNLSVKEMKYRPKIGPGDFDTK 130
            E RINDRIRAREVRLIG DG Q+G+K LPEA  IAR + LDLVEVAP A PPVC++MDYS+FKYE  Q+AKES++K++N+SVKEMKYRPKIGPGDF+TK
Sbjct:    8 ETRINDRIRAREVRLIGADGAQLGIKALPEALVIARDADLDLVEVAPMANPPVCRIMDYSRFKYETEQKAKESRRKTTNISVKEMKYRPKIGPGDFETK 106          
BLAST of mRNA_M-pyrifera_M_contig120839.4290.1 vs. uniprot
Match: A0A3M2GHN5_ACTSX (Translation initiation factor IF-3 n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GHN5_ACTSX)

HSP 1 Score: 149 bits (376), Expect = 3.400e-43
Identity = 74/96 (77.08%), Postives = 87/96 (90.62%), Query Frame = 0
Query:   35 INDRIRAREVRLIGHDGEQIGVKTLPEAQNIARASGLDLVEVAPEAKPPVCKVMDYSKFKYEANQRAKESKKKSSNLSVKEMKYRPKIGPGDFDTK 130
            +NDRIRAREVRLIG DG+QIGVK LPEA  +ARA+GLDLVEVA +A PPVC++MDY K+KYEA QRAKES++K+S++SVKEMKYRPKIG GDFDTK
Sbjct:    1 MNDRIRAREVRLIGVDGQQIGVKPLPEALAMARAAGLDLVEVADKANPPVCRIMDYGKYKYEAAQRAKESRRKASHVSVKEMKYRPKIGQGDFDTK 96          
BLAST of mRNA_M-pyrifera_M_contig120839.4290.1 vs. uniprot
Match: A0A349BA35_9ACTN (Translation initiation factor IF-3 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349BA35_9ACTN)

HSP 1 Score: 149 bits (376), Expect = 3.720e-43
Identity = 73/96 (76.04%), Postives = 84/96 (87.50%), Query Frame = 0
Query:   35 INDRIRAREVRLIGHDGEQIGVKTLPEAQNIARASGLDLVEVAPEAKPPVCKVMDYSKFKYEANQRAKESKKKSSNLSVKEMKYRPKIGPGDFDTK 130
            +NDRIRAREVRL+G DGEQIG+K LPEA  IAR   LDLVEVA +A PPVC++MDY K+KYEA QRAKES++KSS+ S+KEMKYRPKIGPGDFDTK
Sbjct:    1 MNDRIRAREVRLVGADGEQIGIKPLPEALAIARQQDLDLVEVADKANPPVCRIMDYGKYKYEAAQRAKESRRKSSSASIKEMKYRPKIGPGDFDTK 96          
BLAST of mRNA_M-pyrifera_M_contig120839.4290.1 vs. uniprot
Match: A0A7K0WR75_9ACTN (Translation initiation factor IF-3 n=3 Tax=root TaxID=1 RepID=A0A7K0WR75_9ACTN)

HSP 1 Score: 152 bits (383), Expect = 3.730e-43
Identity = 74/104 (71.15%), Postives = 91/104 (87.50%), Query Frame = 0
Query:   27 APQNDEPRINDRIRAREVRLIGHDGEQIGVKTLPEAQNIARASGLDLVEVAPEAKPPVCKVMDYSKFKYEANQRAKESKKKSSNLSVKEMKYRPKIGPGDFDTK 130
            A   DE R NDRIRAREVRLI  DG+Q+G+K+LPEA +IAR+  LDLVEVAPEA+PPVC++M+++KFKYEA QRAKES+KK++N+ VKEMKYRPKIG GDF+TK
Sbjct:    3 ASPGDETRTNDRIRAREVRLIDPDGQQLGIKSLPEALSIARSMDLDLVEVAPEARPPVCRIMNFTKFKYEAQQRAKESRKKATNIIVKEMKYRPKIGSGDFETK 106          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120839.4290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D6U7K9_9ACTN7.210e-5380.95Translation initiation factor IF-3 n=8 Tax=Acidimi... [more]
A0A7X5WT69_9ACTN1.220e-4883.33Translation initiation factor IF-3 n=1 Tax=Actinom... [more]
A0A2E9XA01_9ACTN2.210e-4472.82Translation initiation factor IF-3 n=2 Tax=Actinob... [more]
A0A6L7JQH4_9ACTN2.890e-4472.73Translation initiation factor IF-3 n=1 Tax=Acidimi... [more]
A0A2E7XBA5_9ACTN4.570e-4463.64Translation initiation factor IF-3 n=2 Tax=Acidimi... [more]
A0A2E8LII8_9ACTN5.970e-4470.87Translation initiation factor IF-3 (Fragment) n=1 ... [more]
A0A2N5JYK6_9ACTN1.090e-4374.75Translation initiation factor IF-3 n=1 Tax=Actinom... [more]
A0A3M2GHN5_ACTSX3.400e-4377.08Translation initiation factor IF-3 n=1 Tax=Actinom... [more]
A0A349BA35_9ACTN3.720e-4376.04Translation initiation factor IF-3 n=1 Tax=Acidimi... [more]
A0A7K0WR75_9ACTN3.730e-4371.15Translation initiation factor IF-3 n=3 Tax=root Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036787Translation initiation factor 3 (IF-3), N-terminal domain superfamilyGENE3D3.10.20.80coord: 30..106
e-value: 3.9E-31
score: 108.9
IPR036787Translation initiation factor 3 (IF-3), N-terminal domain superfamilySUPERFAMILY54364Translation initiation factor IF3, N-terminal domaincoord: 33..106
IPR019814Translation initiation factor 3, N-terminalPFAMPF05198IF3_Ncoord: 35..103
e-value: 2.2E-29
score: 101.5
IPR001288Translation initiation factor 3TIGRFAMTIGR00168TIGR00168coord: 35..130
e-value: 8.8E-35
score: 117.8
IPR001288Translation initiation factor 3PANTHERPTHR10938TRANSLATION INITIATION FACTOR IF-3coord: 13..130
NoneNo IPR availablePANTHERPTHR10938:SF0TRANSLATION INITIATION FACTOR IF-3, MITOCHONDRIALcoord: 13..130
IPR019813Translation initiation factor 3, conserved sitePROSITEPS00938IF3coord: 86..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120839contigM-pyrifera_M_contig120839:2..391 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120839.4290.1mRNA_M-pyrifera_M_contig120839.4290.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120839 2..391 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120839.4290.1 ID=prot_M-pyrifera_M_contig120839.4290.1|Name=mRNA_M-pyrifera_M_contig120839.4290.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp
FSARKRGGGYHANQRRFRAHKDFRAIAPQNDEPRINDRIRAREVRLIGHD
GEQIGVKTLPEAQNIARASGLDLVEVAPEAKPPVCKVMDYSKFKYEANQR
AKESKKKSSNLSVKEMKYRPKIGPGDFDTK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036787T_IF-3_N_sf
IPR019814Translation_initiation_fac_3_N
IPR001288Translation_initiation_fac_3
IPR019813Translation_initiation_fac3_CS