mRNA_M-pyrifera_M_contig12080.4281.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12080.4281.1
Unique NamemRNA_M-pyrifera_M_contig12080.4281.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig12080.4281.1 vs. uniprot
Match: D8LIB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB0_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 7.280e-99
Identity = 147/209 (70.33%), Postives = 172/209 (82.30%), Query Frame = 1 
Query:   13 SSSSCFGTMFRPLDHPTTSVLLATVMVLSMCAAFGARQSLCLIWNHTFMTQFYFWNVLTASYVETSVFKLVFALVGMVGMGPAAEESLGHVGLAVFLLVVSLAAGLITSTGTFVAYIVTRQEYLLDLELHGSFGLLAGLAVAAAQQSPEGSLMPVGFGPWFPKRYFPLLLLTASAVGRALSVPVISDDFPFVCVGGYAAWVYLRFFAHM 639
            SS+SCFGT+FRP+ HPTTS LL  ++VLS  A  G R SL LIWNHTFMTQFYFWNVLT S+VETSVFKLV +L+G+ G+GPAAE+SLGH+GL  F+L V L +G +TS G F+ YIVTRQEYLLDLELHGSFG+LA LAVAAAQQ    +L+P G  PWFP RY PLLL+TASA+ RALSVPV++ DFPFV VG YA+WVYLRFFAH+
Sbjct:    2 SSASCFGTLFRPVQHPTTSALLCVILVLSAAAGLGWRHSLSLIWNHTFMTQFYFWNVLTGSFVETSVFKLVASLIGVAGLGPAAEDSLGHLGLGAFVLCVGLVSGFVTSCGIFMGYIVTRQEYLLDLELHGSFGVLAALAVAAAQQDASATLLPAGRAPWFPTRYLPLLLVTASAMCRALSVPVVAKDFPFVVVGAYASWVYLRFFAHL 210
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BLAST of mRNA_M-pyrifera_M_contig12080.4281.1 vs. uniprot
Match: A0A836CJN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJN9_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.460e-45
Identity = 91/198 (45.96%), Postives = 118/198 (59.60%), Query Frame = 1 
Query:   43 RPLDHPTTSVLLATVMVLSMCAAFGAR--QSLCLIWNHTFMTQFYFWNVLTASYVETSVFKLVFALVGMVGMGPAAEESLGHVGLAVFLLVVSLAAGLITSTGTFVAYIVTRQEYLLDLELHGSFGLLAGLAVAAAQQSPEGSLMPVGFGPWFPKRYFPLLLLTASAVGRALSVPVISDDFPFVCVGGYAAWVYLRFF 630
            RP +HP T+ LL  V  L + A F     Q+L LIWN TFM QF+ WNV+T S VE++  K   +LVG+   GP  E SLG V +  ++ +V +A G+ITS   F  Y+VTR EYLL LE+HG++GL+  LAVA A   P   L        F  R+ P+  +T S +     +  +S DFPFVCVG YA WVYLRFF
Sbjct:    6 RPAEHPMTTGLLCVVATLFVAATFSPSLFQALALIWNKTFMEQFHVWNVVTGSLVESNAVKAAISLVGIAFFGPTVEASLGTVWMGAYVGIVCVACGVITSCAIFALYVVTRDEYLLSLEVHGAWGLVCALAVAFAHALPLEPLFAPPALRGFKVRHLPVTAITLSGILYGAGLRAMSTDFPFVCVGSYAGWVYLRFF 203
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BLAST of mRNA_M-pyrifera_M_contig12080.4281.1 vs. uniprot
Match: A0A7S2CKW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CKW4_9STRA)

HSP 1 Score: 110 bits (274), Expect = 3.190e-25
Identity = 68/195 (34.87%), Postives = 104/195 (53.33%), Query Frame = 1 
Query:   52 DHPTTSVLLATVMVL---SMCAAFGARQSLCLIWNHTFMTQFYFWNVLTASYVETSVFKLVFALVGMVGMGPAAEESLGHVGLAVFLLVVSLAAGLITSTGTFVAYIVTRQEYLLDLELHGSFGLLAGLAVAAAQQSPEGSLMPVGFGPWFPKRYFPLLLLTASAVGRALSVPVISDDFPFVCVGGYAAWVYLRF 627
            +HP T+  +  V+VL    + A  G  + + LI  +T    FY WN  TA + ET++ K++F L  +   G   EES+G  G A+F +VV+   GL+TS   F  ++VTR E +L ++ +G  GL+  LAV     +P  + +P    P     + P+LL   S     L++   + D PFV +G YA+W YLRF
Sbjct:   38 EHPVTAASMGMVLVLFLAGLVAREGMGERVTLILANTVGMNFYLWNFFTAGFYETNILKVLFDLACLASAGRMLEESMGTEGFAIFWVVVNGLNGLVTSVALFSLFVVTRMETVLFMQTYGFGGLIGALAVGLKLIAPRETPLPTV--PSLKCHHLPMLLGIVSLFCWTLNITAFAKDTPFVVIGIYASWWYLRF 230
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BLAST of mRNA_M-pyrifera_M_contig12080.4281.1 vs. uniprot
Match: A0A7S2HCE9_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HCE9_9STRA)

HSP 1 Score: 106 bits (265), Expect = 4.920e-24
Identity = 67/195 (34.36%), Postives = 100/195 (51.28%), Query Frame = 1 
Query:   52 DHPTTSV---LLATVMVLSMCAAFGARQSLCLIWNHTFMTQFYFWNVLTASYVETSVFKLVFALVGMVGMGPAAEESLGHVGLAVFLLVVSLAAGLITSTGTFVAYIVTRQEYLLDLELHGSFGLLAGLAVAAAQQSPEGSLMPVGFGPWFPKRYFPLLLLTASAVGRALSVPVISDDFPFVCVGGYAAWVYLRF 627
            +HP TS    L+    V ++ A         L+  +TF   FY WN LTA  +ETS  KL   ++G++ +GP AE+S+G    A+FL VV+   G+ T    F  +++ R E  L ++ +G  G+LA L +A     P     P+   P     + P+LL+  +   R L +  +S D PFV  G YA+W YLRF
Sbjct:   21 NHPVTSACTFLILIFYVAALIAPSSVTFHASLVLANTFGENFYLWNFLTAGLLETSTLKLFVNVIGLISLGPGAEDSMGTEKFAIFLPVVNGITGITTCVLIFCWFVLFRFEDSLFVQTYGFGGILAALTMANKLTRPTEH--PISSLPTLKYEHLPMLLVLLAISARCLGISSLSRDLPFVITGAYASWWYLRF 213
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BLAST of mRNA_M-pyrifera_M_contig12080.4281.1 vs. uniprot
Match: A0A7S2SH00_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SH00_9STRA)

HSP 1 Score: 100 bits (249), Expect = 9.760e-22
Identity = 67/200 (33.50%), Postives = 103/200 (51.50%), Query Frame = 1 
Query:   37 MFRPLDHPTTSVLLATVMVLSMCAAFGAR---QSLCLIWNHTFMTQFYFWNVLTASYVETSVFKLVFALVGMVGMGPAAEESLGHVGLAVFLLVVSLAAGLITSTGTFVAYIVTRQEYLLDLELHGSFGLLAGLAVAAAQQSPEGSLMPVGFGPWFPKRYFPLLLLTASAVGRALSVPVISDDFPFVCVGGYAAWVYLRF 627
            M  PL  P T+     ++VL +    G       + L+  HT    FY WN+++A + ET++ KL   L  +       EE++G    A++L VV++  G++TST  FV Y++TR E  L +   G  G++  LAVA    SP+ + +P      +   + P LL   SA+G  +   +I+ D PFV  G YA+W YLRF
Sbjct:    7 MAVPLRTPVTAAAGGLLVVLFVAGLIGGEYVASRMSLVLAHTVGHNFYVWNLVSAGFFETNLVKLAVDLGWVATASRTVEETMGLENFAIYLGVVNIMCGVVTSTALFVLYVITRFEDYLFMPTFGFGGIMGALAVALKCFSPKEAPIPAMSALRY--EHLPPLLAILSAMGWVVGWQLIARDTPFVLTGTYASWWYLRF 204
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BLAST of mRNA_M-pyrifera_M_contig12080.4281.1 vs. uniprot
Match: A0A7N0R9G9_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0R9G9_KALFE)

HSP 1 Score: 76.6 bits (187), Expect = 4.820e-13
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 1 
Query:  175 WNVLTASYVETSVFKLVFALVGMVGMGPAAEESLGHVGLAVFLLVVSLAAGLITSTGTFVAYIVTRQEYLLDLELHGSFGLLAGLAVAAAQQSPEGSLMPVGFGPWFPKRYFPLLLLTASAVGRALSVPVISDDFPFVCVGGYAAWVYLRFF 630
            WN+LTA YVE SVF LV ++VG++ MG   E   G      F+++V+L   +   T     Y +TR+E  L   + G  G+L+G  V   Q  P+  L    F      ++ P L++ +S V    ++  ++   P +  G Y +W+YLR+F
Sbjct:   57 WNILTAGYVEQSVFGLVVSIVGLLFMGKVLEPIWGSREFFKFVIIVNLMTYVSVFTTAIALYYITRKEIFLYTPISGFHGVLSGFLVGVKQIIPDQELSL--FSLRIKSKWLPSLVVLSSIVTSLFTLNSVAY-LPVLIFGTYTSWIYLRYF 205
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BLAST of mRNA_M-pyrifera_M_contig12080.4281.1 vs. uniprot
Match: D8TYD4_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TYD4_VOLCA)

HSP 1 Score: 75.9 bits (185), Expect = 9.700e-13
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 1 
Query:  169 YFWNVLTASYVETSVFKLVFALVGMVGMGPAAEESLGHVGLAVFLLVVSLAAGLITSTGTFVAYIVTRQEY-LLDLELHGSFGLLAGLAVAAAQQSPEGSLMPVGFGPWFPKRYFPLLLLTASAVGRALSVPVISDDFPFVCVGGYAAWVYLRFF 630
            Y WN+ TA  + T+  KL   ++ ++ +    E   G      FL VV  +  L    G ++ + + +    +L ++  G  G+LAGL VA  Q  PE      GF   F  +Y PLL LT + VG A++   +SD  PF+ +G Y AW+YLRFF
Sbjct:   43 YVWNLFTAGLLTTNPIKLGLEVIAVLLLTRLVEPVYGSKEFLKFLFVVDFSVSLCVLAGVYIIFAIGQDTGDILYIKFTGFHGILAGLVVAVKQVMPEHEAKLFGFVK-FTFKYLPLLFLTVT-VGAAVAFKQLSD-IPFLVLGTYNAWLYLRFF 194
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BLAST of mRNA_M-pyrifera_M_contig12080.4281.1 vs. uniprot
Match: A0A250WVM0_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WVM0_9CHLO)

HSP 1 Score: 74.3 bits (181), Expect = 2.950e-12
Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = 1 
Query:  175 WNVLTASYVETSVFKLVFALVGMVGMGPAAEESLGHVGLAVFLLVVSLAAGLITSTGTFVAYIVTRQEYLLDLELHGSFGLLAGLAVAAAQQSPEGSLMPVGFGPWFPKRYFPLLLL-TASAVGRALSVPVISDDFPFVCVGGYAAWVYLRFFAH 636
            WN++TA ++ T+VFKL+  L+ ++ +    E   G      F+ +V  A  L      ++ Y  T    LL ++ HG  G+ AGL VA  Q   +  +   G    F  RY P++++  A+AV  AL         PF+  G Y+AW+YLRFF +
Sbjct:   50 WNLVTAGFLTTNVFKLISELLALILLARLVEPVYGSKEFLKFIFIVDFATCLSVFVCVYITYAATAYGDLLYIKFHGFHGIAAGLLVAVKQVMQDQDITLFG-SLKFSIRYLPIVVIFIATAVAVALQDLY---SIPFMYFGAYSAWLYLRFFQY 200
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BLAST of mRNA_M-pyrifera_M_contig12080.4281.1 vs. uniprot
Match: A0A8J4C7S4_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4C7S4_9CHLO)

HSP 1 Score: 71.6 bits (174), Expect = 3.060e-11
Identity = 51/155 (32.90%), Postives = 77/155 (49.68%), Query Frame = 1 
Query:  169 YFWNVLTASYVETSVFKLVFALVGMVGMGPAAEESLGHVGLAVFLLVVSLAAGLITSTGTFVAYIVTRQEY-LLDLELHGSFGLLAGLAVAAAQQSPEGSLMPVGFGPWFPKRYFPLLLLTASAVGRALSVPVISDDFPFVCVGGYAAWVYLRFF 630
            Y WN+ TA ++ T+  KL   ++ ++ +    E   G      FL VV  +  L    G ++ + + +    +L  +  G  G+LAG+ VA  Q  PE      GF   F  +Y PLL L A  VG A ++   S+  PF+ +G Y AW+YLRFF
Sbjct:   43 YVWNLFTAGFITTNPIKLGLEVIAVLLLTRLVEPIYGSKEFLKFLFVVDFSVSLCVLAGVYIIFAMGKDTGDILYTKFTGFHGILAGMVVAVKQVMPEHEAKLFGFVK-FTFKYLPLLFL-AVTVGLAAALKQFSE-IPFLLLGTYNAWLYLRFF 194
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BLAST of mRNA_M-pyrifera_M_contig12080.4281.1 vs. uniprot
Match: W1PIG7_AMBTC (Uncharacterized protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=W1PIG7_AMBTC)

HSP 1 Score: 70.9 bits (172), Expect = 6.230e-11
Identity = 47/153 (30.72%), Postives = 77/153 (50.33%), Query Frame = 1 
Query:  175 WNVLTASYVETSVFKLVFALVGMVGMGPAAEESLGHVGLAVFLLVVSLAAGLITSTGTFVAYIVTRQEYLLDLELHGSFGLLAGLAVAAAQQSPEGSLMPVGFGPWFPK-RYFPLLLLTASAVGRALSVPVISDDFPFVCVGGYAAWVYLRFF 630
            WNV+TA Y+E S+F L+  ++G++  G   E   G      F++ V+    L       ++Y+ T++E  L + L G  G+L+G  V   Q  P+  +  VGFG +  +  + P +L+  + V    +V  +    PFV  G Y  W YLR+F
Sbjct:   76 WNVITAGYIEQSIFGLILTIIGLLLGGKLLEPIWGTREFLKFIVFVNFFTLLGVFLTAIISYVATKRETYLYMPLSGFHGVLSGFLVGVKQNMPDEEV--VGFGRFSLRAEWLPSILVLMTIVLSFFTVEAMRFV-PFVIFGTYGGWFYLRYF 225
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12080.4281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIB0_ECTSI7.280e-9970.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CJN9_9STRA1.460e-4545.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CKW4_9STRA3.190e-2534.87Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2HCE9_9STRA4.920e-2434.36Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2SH00_9STRA9.760e-2233.50Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
A0A7N0R9G9_KALFE4.820e-1332.24Uncharacterized protein n=1 Tax=Kalanchoe fedtsche... [more]
D8TYD4_VOLCA9.700e-1334.19Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A0A250WVM0_9CHLO2.950e-1232.26Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A8J4C7S4_9CHLO3.060e-1132.90Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ... [more]
W1PIG7_AMBTC6.230e-1130.72Uncharacterized protein n=2 Tax=Amborella trichopo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12080contigM-pyrifera_M_contig12080:3151..9125 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score302.8
Seed ortholog evalue1.3e-79
Seed eggNOG ortholog2880.D8LIB0
Preferred nameTMEM115
KEGG koko:K04859
KEGG TC8.A.18.2
KEGG Pathwayko04010,ko04260,ko04261,ko04921,ko05410,ko05412,ko05414,map04010,map04260,map04261,map04921,map05410,map05412,map05414
Hectar predicted targeting categorysignal peptide
GOsGO:0000139,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005794,GO:0005795,GO:0005798,GO:0006464,GO:0006486,GO:0006807,GO:0006810,GO:0006888,GO:0006890,GO:0008150,GO:0008152,GO:0008285,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0016020,GO:0016192,GO:0019538,GO:0030135,GO:0030137,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0031985,GO:0032580,GO:0034645,GO:0036211,GO:0042127,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048193,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0065007,GO:0070085,GO:0071704,GO:0097708,GO:0098588,GO:0098791,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.retrograde vesicle-mediated transport, Golgi to ER
EggNOG OGsKOG2890@1,KOG2890@2759
Ec32 ortholog descriptionProtein of unknown function DUF1751, integral membrane, eukaryotic
Ec32 orthologEc-24_001460.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Exons5
Model size642
Cds size639
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12080.4281.1prot_M-pyrifera_M_contig12080.4281.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12080 3154..9125 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815727.480754-UTR-M-pyrifera_M_contig12080:3150..31531622815727.480754-UTR-M-pyrifera_M_contig12080:3150..3153Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig12080 3151..3153 +
1692277541.1084428-UTR-M-pyrifera_M_contig12080:3150..31531692277541.1084428-UTR-M-pyrifera_M_contig12080:3150..3153Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig12080 3151..3153 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815727.4935277-CDS-M-pyrifera_M_contig12080:3153..33261622815727.4935277-CDS-M-pyrifera_M_contig12080:3153..3326Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12080 3154..3326 +
1692277541.1221378-CDS-M-pyrifera_M_contig12080:3153..33261692277541.1221378-CDS-M-pyrifera_M_contig12080:3153..3326Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12080 3154..3326 +
1622815727.5080976-CDS-M-pyrifera_M_contig12080:4236..42991622815727.5080976-CDS-M-pyrifera_M_contig12080:4236..4299Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12080 4237..4299 +
1692277541.1299706-CDS-M-pyrifera_M_contig12080:4236..42991692277541.1299706-CDS-M-pyrifera_M_contig12080:4236..4299Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12080 4237..4299 +
1622815727.517887-CDS-M-pyrifera_M_contig12080:5080..52341622815727.517887-CDS-M-pyrifera_M_contig12080:5080..5234Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12080 5081..5234 +
1692277541.1398854-CDS-M-pyrifera_M_contig12080:5080..52341692277541.1398854-CDS-M-pyrifera_M_contig12080:5080..5234Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12080 5081..5234 +
1622815727.5272772-CDS-M-pyrifera_M_contig12080:6090..61711622815727.5272772-CDS-M-pyrifera_M_contig12080:6090..6171Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12080 6091..6171 +
1692277541.1493013-CDS-M-pyrifera_M_contig12080:6090..61711692277541.1493013-CDS-M-pyrifera_M_contig12080:6090..6171Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12080 6091..6171 +
1622815727.5366082-CDS-M-pyrifera_M_contig12080:8957..91251622815727.5366082-CDS-M-pyrifera_M_contig12080:8957..9125Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12080 8958..9125 +
1692277541.1587548-CDS-M-pyrifera_M_contig12080:8957..91251692277541.1587548-CDS-M-pyrifera_M_contig12080:8957..9125Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12080 8958..9125 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12080.4281.1

>prot_M-pyrifera_M_contig12080.4281.1 ID=prot_M-pyrifera_M_contig12080.4281.1|Name=mRNA_M-pyrifera_M_contig12080.4281.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp
MSSSSSSCFGTMFRPLDHPTTSVLLATVMVLSMCAAFGARQSLCLIWNHT
FMTQFYFWNVLTASYVETSVFKLVFALVGMVGMGPAAEESLGHVGLAVFL
LVVSLAAGLITSTGTFVAYIVTRQEYLLDLELHGSFGLLAGLAVAAAQQS
PEGSLMPVGFGPWFPKRYFPLLLLTASAVGRALSVPVISDDFPFVCVGGY
AAWVYLRFFAHM*
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mRNA from alignment at M-pyrifera_M_contig12080:3151..9125+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12080.4281.1 ID=mRNA_M-pyrifera_M_contig12080.4281.1|Name=mRNA_M-pyrifera_M_contig12080.4281.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5975bp|location=Sequence derived from alignment at M-pyrifera_M_contig12080:3151..9125+ (Macrocystis pyrifera P11B4 male)
GGTATGTCTTCTTCCTCCTCCTCCTGCTTCGGAACGATGTTCCGGCCCTT
GGACCACCCTACGACGTCCGTTCTTCTCGCGACCGTGATGGTGTTGTCGA
TGTGCGCGGCTTTCGGAGCGCGGCAGTCCCTCTGCCTTATCTGGAACCAC
ACCTTCATGACGCAGTTCTACTTCTGGTGAGAGAGACCACCCCCGTCCTC
CCTATCCCGTACGACTACGGCCATCCATGACATGAGTACACCCCCTCCTT
CCTTGCCCTCCCCTCCCTCCCCTCCCCCCTCCCCTCCCTCCCCTCCCTCC
CGCACCGACAATGCCTCAGGCGCGGGCGCGTGCGGGGCAGCGGTCTTGTT
TGGAGCATGACCGTGATTCACGTTTTGCTCCTGTGATGAAATGTGTGTGT
TTTCAGGTGTTCGTCCCACGCACAGATTTTTTTTTTTGTCACAGACCTTC
GAACGCACGGGGACGTTTTTTTTTTTTTTCAAATACGATACCATACCCTT
TTGAGTTGCCCCACTGGGGCGTGAATGCTGCCACGTTTTTCCCCACGTAC
ACTCACGGTTTGACCCTTGACCCTCATCGTCTCTCCCGCCGCCGCCACCG
CTACCACCGCCGCTGACGCGCGGTCCCACTTCCGTGGACTGTGTCGCCGC
TGCTGACCGCTGCTGTTTCCGCCGCTGCTGTTGCTGCTGTTGCTTCGGCT
GTTTCGGCTGTTTTCTGCTGCCGATCCCGCTGCTGCTCTTGCTGCCGCCG
CGTCTGCTGCTTGTGCTCCCGCTGCTTTTGTGTTCCGTGTTGCTTCCGTC
GCTGCTGCTGTTACGGCTGCTGCTGTTACGGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCCGCCGCCGCCGCCGCCGCTGCCCGATGCTATAATACCGCCT
CCGACACCGCTGCCTGGCGCTGCTATCGCTACGGCTGCCGTTTTTGGCTT
CCGTCAATCGCGGTTACGGGGCGCTATCCGCTACCTCTCGCTGGGGTGTA
CGTGCGTACCGCGTACCCCCCTTGTCCCCTGTTTACGCCCGCCTCCGTGG
GGGTGGCGGTGCTTTGTCGTTTTTTGTCTCGAGCAGGAACGTGCTGACAG
CTAGCTACGTGGAGACGTCTGTCTTCAAGCTGGTCTTTGCTCTTGTCGGG
TGCGTATGTGCTGGTGATGTCTCTGTACATATATATATATATTTTGGGTG
AATATAATATATGGAGCTTTAGATATATGCGAAGTACAGGGTTACATGTT
TGTTTTTCTCGAACCGAACCGAACCGAACCGAACCGGACCGAACTAGAGA
GAAAGACAGACAGACACAGACCCAGAGAGGGGCGGATAAAGCCAAACAGG
GAGGGAGAGGGAGAGGCAGAGACAAGAGAGAGATGCCTAGGGAAGGGAAT
ATACTACTTTGGTTAATTCGGTTCGGGTCGGTTCCAATCGGTTCGGTTTC
ATCCCATTCCGCTCGATCCAGAACGGTACTGTACCGTACGATACAGTACG
GCACGGTACGGTACGTTTCGACACGGCTCGATTCGGGTCGGTTCCGCCCC
GTTCGATTCCGTTCGCGGCTCGGCTCCATTCGGATCGGCTCCGTTCCGTT
CCCCTCCTCTCAGTTTCAGTTCGGTCCAGTTCGTTTCGGTGCAGCACGGT
ACGGTATGCGGTGCCCAAATATTGTGATCATGCACCCTCGACCCCGCCCG
GCCCCGCCCCCCGTACAGCGCGCGTGTCGGTGGGCTTCGATACATCACGG
TATAGCAATACAATACAGTACCTTACCATACAGAGTTACGTACGACAGCA
GTAGATTGATACCTGGTACAGTATATGCGGTACAGTACCGATGCCCCCTT
GCCCCGCCCTGTCGTAACCTGCGAACGTGTGTGATCGGTCGGTCGGTTGA
TTGGTTGCTCGGTCGGTCGGTCGGTCGCAGCATGGTCGGCATGGGCCCGG
CAGCGGAGGAGTCGCTGGGGCACGTGGGGTTGGCGGTCTTCCTCCTTGTC
GTGAGCTTGGCGGCGGGGCTGATCACGTCGACGGGCACCTTCGTGGCCTA
CATCGTCACCAGGCAGGAGTACCTGCTAGACCTGGTGAGGCGTGCTTGTT
GCTGCGGCTCTTTTTGGTGATGGTCTTGTCGTTTGTCATTTTCTTGTTTG
TTCTTGTTCTTGCTTTGGTTCTGGTCGTGGTTGTTGTGGTTGTTGTTGGT
GGTGGTGTTCTTGTCCTGGTGAGGAGTTAAGGTACGGCGTGCGCGGAGCC
TAGGGAGTCTTAACGGCGCCCCGGAACTCACCACTCTCTCCTCTCTCTCT
AGCTGGTCTCAGTCTCCCTCTCTCCCTATCTATCTCTTTCTCTTTCTCTT
TCTCTCCTTTTCTCGGCCTTTCTCCTCTTTCGGGGCGGTTGGTTGGGACG
GGGGGGTGGGGTCAAGGAGTGCGATCTCACTCACACAGCTTCTTAAACGT
GTTTTTTTTTTATGTTTCGAAAAAAACGAAAAATATACCGAAAATGCTGA
AAGATACTGAAAAAAAAACTGGAAAACAGTCCTCGTTCAGATCGCGACCC
TAACCCACATCAAAATATGCCCCCAATCAAGTTGCCTCCACGCTCCCCTG
TGATAACCGGACGAAGAAAACTGCAGTCGTGTCCCCAGTCTCCCGGGCCT
AAAGACCGCCCTCCTCGCGCTGTAACTCCCAAAGGGAGATGGCATGAGGT
TGCCCCAGCCGAGTTGCCTCCACGCCCCCGTGATCACCGGCGGGGATGCT
GCCGTCGTGTCCCCCGTGTTCCATGCCAAAACCCTTAGCCCACCTCTCAC
TGTAACTCCCGCAGGGTAGAGGACACGCTCTGACAACAAGCTTTTTTTGC
TCTCGTTCCATCCCGTGCCTCGCGTTGTGGCTGCCGTTTCTCGCTTGGGG
TGTGGGGGGGGGGGCGGGTCTGTGTTTTTTGTTGTCGCAGGAGTTGCACG
GAAGCTTTGGGCTGCTGGCGGGGCTAGCAGTTGCAGCGGCGCAGCAAAGT
CCGGAGGGTTCATTGATGCCTGTGAGACGGGAACATTAGCACTGAGAGGG
AAAGGGTGTTACCAAAAGTGCGGGAGGGGTAGGGGGGCGGGGAGTAGTGT
GCTCGTGTCGTGCCTGGCCGTAGTCATATGACCATAGACCCTCGCATCCC
TACAATGCCGGCACGGAGCATGATGTCGGGTTTTCACCGACCAGGCAGGC
AGGGGGGGGTGAACTCGTTGTTATGCCTGGCCGTAGTCATTTGACAGTAG
TGGGGGAGGAGGGGGGGCTAAAAACGGGAGTTTTTGGTTGTTTTTCCCTG
GAATGTTTAGTGTTTTTGTCCACTGGAGGTGCAACATACACAGCAGCCAG
TATACATGCGATTTTTTTTATGTTCCTTTTGTTTTCTGCTCTCCACCGGA
ACCGGATGGCTGCGGGTCGTTCCCGTACTACCGTATCACCCGTGTGATAA
CATAACACCCCCCGTATAACCCGTGTGATAAAATAACACACCCCGTATCA
CCCGTGTGATAACATAGCACACCCCGTATCACCCGTGTGATAACATAACA
CACCCCGTATCACCCGTGTGATAACATAACACACCCCGTATCACCCGTGT
GATAAAATAACACACCCCGTATCACCCGTGTGATAACATAACGTATCCCG
TATCACCCGTGTGATAACATAACACACCCCCTCTGACGATTTATCGAACT
GATTTTATCTGAAAACGCGGAGCGCGCCCAAACACCGAGCGATGAATCTC
GAAACATGACGACAAGCGCTCTTTGCCCAAACCGACTTCCGTCGTTTTTT
GTGTGCTCCCCTCGGTTTGGAGGAAATGAGCTCGGAAATTCGTCGCGATA
AGTGCGCTGTCTTGCTCGCCGCCTAGAACGGTTTGGACGGCAGGCAGGCT
GAGCCTCCGCCGTTTTCTTTGTTTTTCGGCTTTCGAACGAAAACAAAATC
GGGTTTATCGCGATGTTCGCCGAAACTTTCGACAAAATTAAATAAAAAAA
AAACCGGCCTTTTCGGCTCGAATGTATTAAAGTCGGCTCGAAATCTTGAA
GAAAGTCGGTTCATTCGCACGGAAATGGGCTTTTTTGGTCGTGTTGGAAG
CAGGCTCGATCGGCGTGTACTATCAGCAGAGCGCTCGCCGCATCGGACAG
CAGGCGTCAAAACCCCGCAATGCAACTCCCCCCCCTTTTTGTTTTTTTGA
ACATATTTTTCGTTAGAACCAACAAATGCTATGTAGGCGTTTCTGTGCCG
AGGACGAGTGAAAATTAGCTATTTAGGAGAAGTCGACCCCTGGAACGAAA
AACGCTCCTGTCACCCGAAAAATCGGCTCAAGGGGCGATAAAAAAAAAAA
CGGCCTGCTTTAAAACCCGGGCTTCTTTTTTACCCTAGAATCGGCCTTTT
GGGCAAAAAAGCCAGCAGAGGCTTAAGCCTGTTGGGCGGTACGATAGAGC
GCTGCCAGTATAGCTGAGTTTTTTCAACAGGGTGGTTTTGCGACTATTCT
GGTTGGGTCGGGTTTCTAGTAGTCTGTTTCCTGTATATTACGGGGGGGCA
TAGTAAATAGGACCTACGGTACACACAAAAACCTATATGTTTTATTGCTT
TTACTAACAATATTTGGTCCTGTTTACTACGGTCCCCCGTAAATAGTAGC
AATCCCAACCCTCGAAAAAATCATTTGCCGTGGGGGGGAAGAAAAAAACT
GGCCGAAGTGACGCTTTTATTAATCTGCAGGTGAGTGGCCGTTGGGGTTG
GGCATCTCTGCGGGTTGGTCGGCAGACGGAGCGACTCTTGATTCACCGGT
GTTTGTTTAACCAATCAGCTCCTCATGTCTGCTATCGGTTCCAACTATTT
GTTATCACGGGGGACCGTAGTAAATAGGACCAAATATTGTTAGTAAAAAT
AGGTAAATATATAGGTTTTTATGTAAACCATAGGTCCTATTAACTGTGGA
TCCCCGTATTATCACCCAACCAGCTTGCATTACAGCGGCGCAAGCACCCT
GATGCTTCACAGGTAGGGGTGCGTCATCACCGACCCTCGCTTCGTGCATC
ATGTCCTGCGGATCTCACTTCACAGCAGTGTATATATATATATATATATA
CTTGGTGGGGTGTTTGCGATACTATTAGTACGAGAGACCATGGTATATAG
GACCAAATATTGTTAGTAAAAATAGGTAAATGTATAGGTTTTTGTGTGTG
CCATAGGTCCTATTAACTATGGACCCCCGTAATACTAGTCCAGTTTCGTA
GGGTTTCTATAAAAAAAAAATTAAGTACAAAAAAAATATTATTTGAAACC
GACGAATAGGAGCAGAGCCGATTGCTTTCGTAAAACAGGTGAACCATAAG
TCGCTGCGTTTACTATTACGGGGGACCATAGTAAATAGGACCAAATATTT
GTTGGTAAAAAATAGGGAAATGTAGAGGTGTTTGTGTGTGCCATAGGTCC
TATTCACTATGGTCCCCCCGTAATAAGCAACCCACAGAGATGCCCGCACA
AATGGCACTCTGTCCATACACACAGGGGACATTTCTATGCTATTAATAAT
ATTCAATTTAAAAAAACGTCGTTATCGCCACGTTTTTCCCACAGCGATTG
ATTTTTTCGCGGGTTGGGGTTTCCTATGTATTGCATACAAGCACGAGTAA
TGGGGGACAGACCACGAAAAACCCAACCAATCATTTTTTTTCGCCCGCAC
ATCCTGTTGATAGTACAGTATTAATGGGGTACAAGCGGGTTCGTTACTCT
TACGTCTCTTTTTTTTGTTTTTTTCTCTCGTCTGTTTACTCCGTCGGGAA
ATAACAGGTTGGCTTCGGGCCTTGGTTCCCCAAGCGGTACTTCCCTCTCC
TCCTGCTGACAGCTTCTGCCGTCGGTAGAGCCCTGTCGGTACCAGTCATC
TCCGACGACTTCCCTTTCGTCTGCGTTGGGGGTTACGCAGCGTGGGTCTA
CCTTCGCTTCTTCGCGCACATGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12080:3151..9125+

>mRNA_M-pyrifera_M_contig12080.4281.1 ID=mRNA_M-pyrifera_M_contig12080.4281.1|Name=mRNA_M-pyrifera_M_contig12080.4281.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1278bp|location=Sequence derived from alignment at M-pyrifera_M_contig12080:3151..9125+ (Macrocystis pyrifera P11B4 male)
ATGTCTTCTTCCTCCTCCTCCTGCTTCGGAACGATGTTCCGGCCCTTGGA
CCACCCTACGACGTCCGTTCTTCTCGCGACCGTGATGGTGTTGTCGATGT
GCGCGGCTTTCGGAGCGCGGCAGTCCCTCTGCCTTATCTGGAACCACACC
TTCATGACGCAGTTCTACTTCTGATGTCTTCTTCCTCCTCCTCCTGCTTC
GGAACGATGTTCCGGCCCTTGGACCACCCTACGACGTCCGTTCTTCTCGC
GACCGTGATGGTGTTGTCGATGTGCGCGGCTTTCGGAGCGCGGCAGTCCC
TCTGCCTTATCTGGAACCACACCTTCATGACGCAGTTCTACTTCTGGAAC
GTGCTGACAGCTAGCTACGTGGAGACGTCTGTCTTCAAGCTGGTCTTTGC
TCTTGTCGGGAACGTGCTGACAGCTAGCTACGTGGAGACGTCTGTCTTCA
AGCTGGTCTTTGCTCTTGTCGGCATGGTCGGCATGGGCCCGGCAGCGGAG
GAGTCGCTGGGGCACGTGGGGTTGGCGGTCTTCCTCCTTGTCGTGAGCTT
GGCGGCGGGGCTGATCACGTCGACGGGCACCTTCGTGGCCTACATCGTCA
CCAGGCAGGAGTACCTGCTAGACCTGCATGGTCGGCATGGGCCCGGCAGC
GGAGGAGTCGCTGGGGCACGTGGGGTTGGCGGTCTTCCTCCTTGTCGTGA
GCTTGGCGGCGGGGCTGATCACGTCGACGGGCACCTTCGTGGCCTACATC
GTCACCAGGCAGGAGTACCTGCTAGACCTGGAGTTGCACGGAAGCTTTGG
GCTGCTGGCGGGGCTAGCAGTTGCAGCGGCGCAGCAAAGTCCGGAGGGTT
CATTGATGCCTGAGTTGCACGGAAGCTTTGGGCTGCTGGCGGGGCTAGCA
GTTGCAGCGGCGCAGCAAAGTCCGGAGGGTTCATTGATGCCTGTTGGCTT
CGGGCCTTGGTTCCCCAAGCGGTACTTCCCTCTCCTCCTGCTGACAGCTT
CTGCCGTCGGTAGAGCCCTGTCGGTACCAGTCATCTCCGACGACTTCCCT
TTCGTCTGCGTTGGGGGTTACGCAGCGTGGGTCTACCTTCGCTTCTTCGC
GCACATGTGAGTTGGCTTCGGGCCTTGGTTCCCCAAGCGGTACTTCCCTC
TCCTCCTGCTGACAGCTTCTGCCGTCGGTAGAGCCCTGTCGGTACCAGTC
ATCTCCGACGACTTCCCTTTCGTCTGCGTTGGGGGTTACGCAGCGTGGGT
CTACCTTCGCTTCTTCGCGCACATGTGA
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