mRNA_M-pyrifera_M_contig120600.4242.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120600.4242.1 vs. uniprot
Match: A0A7S0TSN0_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TSN0_HEMAN) HSP 1 Score: 67.4 bits (163), Expect = 3.910e-11 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 1
Query: 13 GAARNQKNRQERKHSLHEHAPSTEETVLIHKLYKEREMSRRNLDSVVVSPDETYFEATKLMHPARKNVHGKVFGGYIMREAFELGYLCA 279
G N+K RQ+RK SL PS +ET+L+HK+ + L ET + T+LM P KN GK+FGG++MREA+EL Y A
Sbjct: 267 GGLANEKRRQDRKTSLRTQHPSEDETMLLHKVMMDSSKQGEGLKI-----GETMLQTTELMQPQEKNRSGKIFGGFLMREAYELAYTTA 350
BLAST of mRNA_M-pyrifera_M_contig120600.4242.1 vs. uniprot
Match: A0A0V0R7H5_PSEPJ (Uncharacterized protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0R7H5_PSEPJ) HSP 1 Score: 67.0 bits (162), Expect = 5.860e-11 Identity = 33/89 (37.08%), Postives = 53/89 (59.55%), Query Frame = 1
Query: 13 GAARNQKNRQERKHSLHEHAPSTEETVLIHKLYKEREMSRRNLDSVVVSPDETYFEATKLMHPARKNVHGKVFGGYIMREAFELGYLCA 279
G +NQK +++ +SL P++EE +H Y ++ + + ET + LMH +N+HGK+FGG++MREAFE+G+LCA
Sbjct: 207 GNKKNQKRKEKFTNSLEIKPPNSEEINYVHSFYLNKKSQDEKYSQNIKNISETSLKKNLLMHMQDRNLHGKIFGGFLMREAFEIGWLCA 295
BLAST of mRNA_M-pyrifera_M_contig120600.4242.1 vs. uniprot
Match: A0A7C7XAT8_9PROT (Uncharacterized protein n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A7C7XAT8_9PROT) HSP 1 Score: 63.2 bits (152), Expect = 1.310e-9 Identity = 33/86 (38.37%), Postives = 53/86 (61.63%), Query Frame = 1
Query: 13 GAARNQKNRQERKHSLHEHAPSTEETVLIHKLYKEREMSRRNLDSVVVSPDETYFEATKLMHPARKNVHGKVFGGYIMREAFELGY 270
G R Q+ R +++ +H P+ EE+V +H+L+ + ++ V ET +AT LMHP +N+H K+FGGY+MR+AFEL +
Sbjct: 179 GEQRQQQRRAMAQNNYLKHTPTAEESVRLHRLF----LRTKHQQITGVPIHETQRQATLLMHPQSRNIHNKIFGGYLMRQAFELAW 260
BLAST of mRNA_M-pyrifera_M_contig120600.4242.1 vs. uniprot
Match: F2TXY5_SALR5 (HotDog ACOT-type domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TXY5_SALR5) HSP 1 Score: 63.2 bits (152), Expect = 1.330e-9 Identity = 31/83 (37.35%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 37 RQERKHSLHEHAPSTEETVLIHKLY-KEREMSR-RNLDSVVVSPDETYFEATKLMHPARKNVHGKVFGGYIMREAFELGYLCA 279
++ER+ S+H P+ EE +++H LY + ++ +R R LD++ + +T ++ ++ HP +N+H +FGG+IMREAFE+G++ A
Sbjct: 210 KREREQSVHRQPPTEEERLIVHDLYLRSKDTTRKRPLDTLWMV--DTQRQSMRMCHPIERNIHNSIFGGFIMREAFEIGWMTA 290
BLAST of mRNA_M-pyrifera_M_contig120600.4242.1 vs. uniprot
Match: A0EB75_PARTE (Uncharacterized protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0EB75_PARTE) HSP 1 Score: 62.4 bits (150), Expect = 2.490e-9 Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 1
Query: 31 KNRQERKHSLHEHAPSTEETVLIHKLYKEREMSRRNLDSVVVSPDETYFEATKLMHPARKNVHGKVFGGYIMREAFELGYLCA 279
K +Q++ L APS EE +HK + ++ DET E T LMH +N+HGKVFGG++MREAFELG+L A
Sbjct: 228 KRKQQKDRGLDRKAPSQEEINELHKFFMNPPSD--------ITIDETQIEKTLLMHIQDRNLHGKVFGGFVMREAFELGWLNA 302
BLAST of mRNA_M-pyrifera_M_contig120600.4242.1 vs. uniprot
Match: A0A316VCY4_9BASI (Uncharacterized protein n=1 Tax=Meira miltonrushii TaxID=1280837 RepID=A0A316VCY4_9BASI) HSP 1 Score: 62.0 bits (149), Expect = 3.520e-9 Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 13 GAARNQKNRQERKHSLHEHAPSTEETVLIHKLY------KEREMSRRNLD--SVVVSPDETYFEATKLMHPARKNVHGKVFGGYIMREAFELGYLCA 279
G A Q+ R E + SL + P+++E L+H+L+ K + ++ ++LD S V ++T + MHP ++NVH K+FGGY+MR A+EL Y+ A
Sbjct: 288 GQAHKQRKRFEAQTSLEKVPPTSDEATLLHQLWLAEEAKKSKAITDKSLDTESKSVYIEDTQLASVSFMHPQQRNVHMKIFGGYLMRSAYELAYMNA 384
BLAST of mRNA_M-pyrifera_M_contig120600.4242.1 vs. uniprot
Match: G4TD44_SERID (Related to acyl-coa thioester hydrolase n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TD44_SERID) HSP 1 Score: 61.2 bits (147), Expect = 6.520e-9 Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 55 SLHEHAPSTEETVLIHKLYKEREMSRRNLDSVVVSP-DETYFEATKLMHPARKNVHGKVFGGYIMREAFELGY 270
SL + P++EE L+H LY + +N D + P ET E T M+P ++N+ KVFGGY+MR A+ELGY
Sbjct: 279 SLDKKPPTSEEAALLHHLYLKYGNGTKNSDGLQPVPISETLLENTMQMYPQQRNIQSKVFGGYLMRLAYELGY 351
BLAST of mRNA_M-pyrifera_M_contig120600.4242.1 vs. uniprot
Match: A0A0C9UIW8_SPHS4 (Unplaced genomic scaffold SPHSTscaffold_120, whole genome shotgun sequence n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9UIW8_SPHS4) HSP 1 Score: 60.5 bits (145), Expect = 1.160e-8 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 1
Query: 55 SLHEHAPSTEETVLIHKLYKER-EMSRRNLDSVVVSPDETYFEATKLMHPARKNVHGKVFGGYIMREAFELGYLCA 279
SL PSTEE +H+LY E S+RN + V ++T E LM P +NVH K+FGGY+MR A+ELG+ A
Sbjct: 177 SLDRVPPSTEEVGELHQLYLNYGENSKRNYHTERVWMEDTSLENCILMFPQERNVHSKIFGGYLMRLAYELGFTAA 252
BLAST of mRNA_M-pyrifera_M_contig120600.4242.1 vs. uniprot
Match: A0A7S4HL79_9EUKA (Hypothetical protein n=2 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HL79_9EUKA) HSP 1 Score: 59.7 bits (143), Expect = 2.180e-8 Identity = 28/69 (40.58%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 73 PSTEETVLIHKLYKEREMSRRNLDSVVVSPDETYFEATKLMHPARKNVHGKVFGGYIMREAFELGYLCA 279
P+ EE ++IH+L+ R+ + ET F++T MHP +N+HG +FGGY+MR+AFE+ +L A
Sbjct: 204 PTPEERIVIHELFLARKNGAKERPL-----KETRFDSTIYMHPREQNIHGHIFGGYLMRKAFEIAFLTA 267
BLAST of mRNA_M-pyrifera_M_contig120600.4242.1 vs. uniprot
Match: A0A8D8RZ80_9HEMI (Acyl-coenzyme A thioesterase 9, mitochondrial n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8RZ80_9HEMI) HSP 1 Score: 59.7 bits (143), Expect = 2.250e-8 Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 1
Query: 10 TGAARNQKNRQERKHSLHEHAPSTEETVLIHKLYKER-EMSRRNLDSVVVSPDETYFEATKL-----MHPARKNVHGKVFGGYIMREAFELGYLC 276
TG R + E SL H PST E +IHK++ + + S L ++ P + EAT+ +HP +N+H K+FGG++MR+A EL +LC
Sbjct: 240 TGLERTNMRKIESNESLLVHPPSTFEQQMIHKVFLDTIDKSNPLLGRRILPPYHVWMEATRQNSVIHLHPEERNLHNKIFGGFLMRQALELAWLC 334 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120600.4242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120600.4242.1 >prot_M-pyrifera_M_contig120600.4242.1 ID=prot_M-pyrifera_M_contig120600.4242.1|Name=mRNA_M-pyrifera_M_contig120600.4242.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp RELTGAARNQKNRQERKHSLHEHAPSTEETVLIHKLYKEREMSRRNLDSVback to top mRNA from alignment at M-pyrifera_M_contig120600:78..536+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120600.4242.1 ID=mRNA_M-pyrifera_M_contig120600.4242.1|Name=mRNA_M-pyrifera_M_contig120600.4242.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig120600:78..536+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120600:78..536+ >mRNA_M-pyrifera_M_contig120600.4242.1 ID=mRNA_M-pyrifera_M_contig120600.4242.1|Name=mRNA_M-pyrifera_M_contig120600.4242.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig120600:78..536+ (Macrocystis pyrifera P11B4 male)back to top |