prot_M-pyrifera_M_contig120578.4239.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120578.4239.1
Unique Nameprot_M-pyrifera_M_contig120578.4239.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length55
Homology
BLAST of mRNA_M-pyrifera_M_contig120578.4239.1 vs. uniprot
Match: A0A7S1X078_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X078_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 1.330e-16
Identity = 32/50 (64.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    2 LCLEPRKLPTATECGHIFCWACIHEACQTKAECPLCRSNVTPATLCRVYN 51
            LCL  R+ PTAT CGHIFCW CI E C  K ECPLCRS++ P TL  +YN
Sbjct:  157 LCLSARRDPTATSCGHIFCWDCISEWCNQKLECPLCRSDINPVTLVPIYN 206          
BLAST of mRNA_M-pyrifera_M_contig120578.4239.1 vs. uniprot
Match: A0A2P6NBR4_9EUKA (RING-type domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBR4_9EUKA)

HSP 1 Score: 80.5 bits (197), Expect = 2.420e-16
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 TLCLEPRKLPTATECGHIFCWACIHEACQTKAECPLCRSNVTPATLCRVYNY 52
            TLCLE    PTAT CGH+FCW CI E C TK ECPLCR  +TP++L  +YNY
Sbjct: 1164 TLCLEALDHPTATPCGHVFCWNCIMEWCNTKLECPLCRQGLTPSSLMCIYNY 1215          
BLAST of mRNA_M-pyrifera_M_contig120578.4239.1 vs. uniprot
Match: A0A507CCP5_9FUNG (RING-type domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CCP5_9FUNG)

HSP 1 Score: 79.3 bits (194), Expect = 3.370e-16
Identity = 34/52 (65.38%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 TLCLEPRKLPTATECGHIFCWACIHEACQTKAECPLCRSNVTPATLCRVYNY 52
            TLCLEPRK  TAT CGH+FCW CI E CQ KAECPLCR +V  + L  V N+
Sbjct:  280 TLCLEPRKTTTATPCGHLFCWTCITEWCQNKAECPLCRQHVNVSHLYTVRNF 331          
BLAST of mRNA_M-pyrifera_M_contig120578.4239.1 vs. uniprot
Match: UPI00201F67D8 (peroxisome biogenesis factor 10-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI00201F67D8)

HSP 1 Score: 79.0 bits (193), Expect = 3.550e-16
Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    2 LCLEPRKLPTATECGHIFCWACIHEACQTKAECPLCRSNVTPATLCRVYNY 52
            LCLE R+  T T CGH+FCW CIHE CQTKAECPLCR   +P  L  ++NY
Sbjct:  248 LCLEGRQFSTVTPCGHLFCWKCIHEWCQTKAECPLCRDQFSPHRLVFLHNY 298          
BLAST of mRNA_M-pyrifera_M_contig120578.4239.1 vs. uniprot
Match: A0A507C2B7_9FUNG (RING-type domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507C2B7_9FUNG)

HSP 1 Score: 78.2 bits (191), Expect = 4.470e-16
Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    1 TLCLEPRKLPTATECGHIFCWACIHEACQTKAECPLCRSNVTPATLCRVYN 51
            TLCLEPRK  TAT CGH+FCW CI E CQ KAECPLCR ++  + L  V N
Sbjct:  213 TLCLEPRKTTTATPCGHLFCWTCITEWCQNKAECPLCRQHINASHLFTVRN 263          
BLAST of mRNA_M-pyrifera_M_contig120578.4239.1 vs. uniprot
Match: UPI001B887C0E (peroxisome biogenesis factor 10-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B887C0E)

HSP 1 Score: 77.8 bits (190), Expect = 9.200e-16
Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 TLCLEPRKLPTATECGHIFCWACIHEACQTKAECPLCRSNVTPATLCRVYNY 52
            +LCLE R+  T T CGH+FCWACIHE CQTKAECPLCR    P  L  + N+
Sbjct:  243 SLCLESRRSTTTTPCGHLFCWACIHEWCQTKAECPLCRERFPPHRLVCLVNF 294          
BLAST of mRNA_M-pyrifera_M_contig120578.4239.1 vs. uniprot
Match: A0A077WB08_9FUNG (RING-type domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WB08_9FUNG)

HSP 1 Score: 77.0 bits (188), Expect = 2.070e-15
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    2 LCLEPRKLPTATECGHIFCWACIHEACQTKAECPLCRSNVTPATLCRVYNY 52
            LCLEPRK+ TAT CGH+FCW+C+ E CQ K ECPLCRS+V  A L  + N+
Sbjct:  263 LCLEPRKVTTATPCGHLFCWSCVIEWCQNKPECPLCRSSVNIAHLIPLNNF 313          
BLAST of mRNA_M-pyrifera_M_contig120578.4239.1 vs. uniprot
Match: A0A812EBY2_SEPPH (PEX10 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812EBY2_SEPPH)

HSP 1 Score: 76.6 bits (187), Expect = 2.190e-15
Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 TLCLEPRKLPTATECGHIFCWACIHEACQTKAECPLCRSNVTPATLCRVYNY 52
            +LCLEPR+  TAT CGH+FCW CI E CQTK ECPLCR   T + L  + NY
Sbjct:  232 SLCLEPRQNTTATPCGHLFCWNCIQEWCQTKGECPLCREKFTTSRLIFLQNY 283          
BLAST of mRNA_M-pyrifera_M_contig120578.4239.1 vs. uniprot
Match: K1R1W6_CRAGI (Peroxisome biogenesis factor 10 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1R1W6_CRAGI)

HSP 1 Score: 75.9 bits (185), Expect = 3.460e-15
Identity = 30/51 (58.82%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    2 LCLEPRKLPTATECGHIFCWACIHEACQTKAECPLCRSNVTPATLCRVYNY 52
            LCLE R+ PTAT CGH+FCW CI+E C TK ECP+CR  + P  L  + NY
Sbjct:  212 LCLEARRSPTATPCGHLFCWQCIYEWCSTKLECPICRETLQPQKLVFLQNY 262          
BLAST of mRNA_M-pyrifera_M_contig120578.4239.1 vs. uniprot
Match: A0A453B4C2_AEGTS (RING-type domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453B4C2_AEGTS)

HSP 1 Score: 72.0 bits (175), Expect = 3.470e-15
Identity = 29/51 (56.86%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    1 TLCLEPRKLPTATECGHIFCWACIHEACQTKAECPLCRSNVTPATLCRVYN 51
            TLCL  R+ PTAT CGH+FCW CI E C  K ECPLCR+ +T ++L  +Y+
Sbjct:   40 TLCLSTRQNPTATTCGHVFCWNCIMEWCNEKPECPLCRTPITHSSLICIYH 90          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120578.4239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1X078_9CHLO1.330e-1664.00Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A2P6NBR4_9EUKA2.420e-1663.46RING-type domain-containing protein n=1 Tax=Planop... [more]
A0A507CCP5_9FUNG3.370e-1665.38RING-type domain-containing protein n=1 Tax=Synchy... [more]
UPI00201F67D83.550e-1662.75peroxisome biogenesis factor 10-like n=2 Tax=Halio... [more]
A0A507C2B7_9FUNG4.470e-1664.71RING-type domain-containing protein n=1 Tax=Synchy... [more]
UPI001B887C0E9.200e-1661.54peroxisome biogenesis factor 10-like n=1 Tax=Gigan... [more]
A0A077WB08_9FUNG2.070e-1562.75RING-type domain-containing protein n=1 Tax=Lichth... [more]
A0A812EBY2_SEPPH2.190e-1561.54PEX10 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A... [more]
K1R1W6_CRAGI3.460e-1558.82Peroxisome biogenesis factor 10 n=2 Tax=Crassostre... [more]
A0A453B4C2_AEGTS3.470e-1556.86RING-type domain-containing protein n=1 Tax=Aegilo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 1..37
e-value: 0.001
score: 28.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 2..38
score: 10.763
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..51
e-value: 6.3E-13
score: 49.9
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 2..42
e-value: 3.9E-7
score: 29.8
NoneNo IPR availablePANTHERPTHR23350:SF0PEROXISOME BIOGENESIS FACTOR 10coord: 1..53
NoneNo IPR availablePANTHERPTHR23350PEROXISOME ASSEMBLY PROTEIN 10coord: 1..53
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 2..44
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 15..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120578contigM-pyrifera_M_contig120578:374..538 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120578.4239.1mRNA_M-pyrifera_M_contig120578.4239.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120578 374..538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120578.4239.1 ID=prot_M-pyrifera_M_contig120578.4239.1|Name=mRNA_M-pyrifera_M_contig120578.4239.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=55bp
TLCLEPRKLPTATECGHIFCWACIHEACQTKAECPLCRSNVTPATLCRVY
NYVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS