mRNA_M-pyrifera_M_contig11984.4086.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11984.4086.1
Unique NamemRNA_M-pyrifera_M_contig11984.4086.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig11984.4086.1 vs. uniprot
Match: A0A0R6LUS1_UNDPI (Probable RuBisCO transcriptional regulator n=29 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUS1_UNDPI)

HSP 1 Score: 569 bits (1466), Expect = 6.920e-204
Identity = 288/318 (90.57%), Postives = 308/318 (96.86%), Query Frame = 1
Query:    4 MKYFPFSLEQLRIIQAIKNEATIKQAAKKLYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKAVVYLKKLKRLSLTIGSNEIVGTYILPKIIDLFCRRYSYTHIKLEIDSTNCISWNIVNGKVDIGIVEEEEIPKELYNSLYSTPYFKEEIVLILPKSHELKNVCSITKEKLYNLDFITLKPNFVGRKLVDDILKKFNIDSGKLKIKLELNSIEAIKRGVQAGLGVSFVSILMVKDELYSKRLNSVMVNEKKISKRLTLLVNLKINESQLSGKFYKYCIAILKTRLYVKFLNLDY 957
            MKYFPFSLEQLRIIQAIKNEATIKQAAK+LYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKA+VYLKKLKR+SLTIGSNEIVGTYILPKIIDLFCRRYSY H+KLEIDSTNCISWNIVNGKVDIGIVEEEEIPKELY+SLYSTPYF+EEIVLILPKSH+ K+V SIT EKLYNLDFITLKP+F+GRKL+D++LKKFNI+S KLKIKLELNSIEAIKRGVQAGLGVSFVSILMVKDELYS RLNSV++N + ISKRLTL+VNLK+ ESQLSGKFYKYC AILKTRLY+KFLNLDY
Sbjct:    1 MKYFPFSLEQLRIIQAIKNEATIKQAAKRLYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKAIVYLKKLKRISLTIGSNEIVGTYILPKIIDLFCRRYSYIHVKLEIDSTNCISWNIVNGKVDIGIVEEEEIPKELYSSLYSTPYFQEEIVLILPKSHKFKDVYSITSEKLYNLDFITLKPDFIGRKLMDNVLKKFNIESDKLKIKLELNSIEAIKRGVQAGLGVSFVSILMVKDELYSSRLNSVIINNRNISKRLTLVVNLKVTESQLSGKFYKYCFAILKTRLYIKFLNLDY 318          
BLAST of mRNA_M-pyrifera_M_contig11984.4086.1 vs. uniprot
Match: A0A8F0F6V8_AKKLU (Probable RuBisCO transcriptional regulator n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F6V8_AKKLU)

HSP 1 Score: 506 bits (1302), Expect = 6.620e-179
Identity = 258/316 (81.65%), Postives = 286/316 (90.51%), Query Frame = 1
Query:    4 MKYFPFSLEQLRIIQAIKNEATIKQAAKKLYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKAVVYLKKLKRLSLTIGSNEIVGTYILPKIIDLFCRRYSYTHIKLEIDSTNCISWNIVNGKVDIGIVEEEEIPKELYNSLYSTPYFKEEIVLILPKSHELKNVCSITKEKLYNLDFITLKPNFVGRKLVDDILKKFNIDSGKLKIKLELNSIEAIKRGVQAGLGVSFVSILMVKDELYSKRLNSVMVNEKKISKRLTLLVNLKINESQLSGKFYKYCIAILKTRLYVKFLNL 951
            MKYFPF+LEQLRIIQAIK EATIKQAA KLYLSQPALSLQIQKLEYEIDSPILDR KKQIY T TGEL+LDYADRIL LCEEADKA++YLKKLKR+SLTIG+NE VGTYILPKII+LFC+RY YT IKLEI  TNCISWNIVNGK+D+GIVEE+EIPKELYNSL S PYF+EEIVLILPK HELKNV +IT+E LYNL+FI LKP F+GRKL+DDILKKFNIDS KLKIKLELNS+EAIKR VQAGLGVSFVSIL+V+DELYSKRL+S +VN   I+KRLTL+VN K+ ESQL GKF++YC  ILKT LY+KFLNL
Sbjct:    1 MKYFPFNLEQLRIIQAIKTEATIKQAATKLYLSQPALSLQIQKLEYEIDSPILDRNKKQIYLTLTGELLLDYADRILSLCEEADKAIIYLKKLKRISLTIGTNETVGTYILPKIINLFCKRYPYTRIKLEIHCTNCISWNIVNGKIDLGIVEEDEIPKELYNSLSSKPYFQEEIVLILPKYHELKNVRNITRENLYNLNFIALKPYFIGRKLMDDILKKFNIDSEKLKIKLELNSVEAIKRSVQAGLGVSFVSILIVRDELYSKRLHSTLVNNISINKRLTLIVNPKMYESQLCGKFHRYCFDILKTSLYIKFLNL 316          
BLAST of mRNA_M-pyrifera_M_contig11984.4086.1 vs. uniprot
Match: A0A8F0F7X1_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0F7X1_9PHAE)

HSP 1 Score: 504 bits (1297), Expect = 3.820e-178
Identity = 254/316 (80.38%), Postives = 288/316 (91.14%), Query Frame = 1
Query:    4 MKYFPFSLEQLRIIQAIKNEATIKQAAKKLYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKAVVYLKKLKRLSLTIGSNEIVGTYILPKIIDLFCRRYSYTHIKLEIDSTNCISWNIVNGKVDIGIVEEEEIPKELYNSLYSTPYFKEEIVLILPKSHELKNVCSITKEKLYNLDFITLKPNFVGRKLVDDILKKFNIDSGKLKIKLELNSIEAIKRGVQAGLGVSFVSILMVKDELYSKRLNSVMVNEKKISKRLTLLVNLKINESQLSGKFYKYCIAILKTRLYVKFLNL 951
            MKYFPFSLEQLRI+QA+KNEATIKQAAKKLYLSQPALSLQIQKLEYEIDSPILDR KKQIY T TGEL+LDYADRIL LCEEADKA++YLKKLKR+SLTIG+NE VGTYILPKII+LFC RY YT IKLEI+  NCISWNIVNGK+D+GIVEE+EIPKELYNSL   PYF+EE+VLILPK HELK+V +I++EKLYNL+FITLKP++VGRKL+DD L+KFNI+S KLKIKLELNS+EAIKR VQAGLGVSF+SILMVKDELYSKRL+  +VN   I+KRLTL+VN K++ESQL GKF+KYC  ILKT LY+KFLNL
Sbjct:    1 MKYFPFSLEQLRIVQAVKNEATIKQAAKKLYLSQPALSLQIQKLEYEIDSPILDRNKKQIYLTLTGELLLDYADRILNLCEEADKAIIYLKKLKRVSLTIGTNETVGTYILPKIINLFCTRYPYTRIKLEINCANCISWNIVNGKIDLGIVEEDEIPKELYNSLSCRPYFQEEMVLILPKYHELKDVRNISREKLYNLNFITLKPHYVGRKLMDDTLQKFNINSDKLKIKLELNSVEAIKRAVQAGLGVSFISILMVKDELYSKRLHCTLVNNISINKRLTLIVNPKMDESQLCGKFHKYCFDILKTSLYIKFLNL 316          
BLAST of mRNA_M-pyrifera_M_contig11984.4086.1 vs. uniprot
Match: A0A8F0F9M1_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9M1_9PHAE)

HSP 1 Score: 446 bits (1148), Expect = 1.700e-155
Identity = 225/316 (71.20%), Postives = 269/316 (85.13%), Query Frame = 1
Query:    4 MKYFPFSLEQLRIIQAIKNEATIKQAAKKLYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKAVVYLKKLKRLSLTIGSNEIVGTYILPKIIDLFCRRYSYTHIKLEIDSTNCISWNIVNGKVDIGIVEEEEIPKELYNSLYSTPYFKEEIVLILPKSHELKNVCSITKEKLYNLDFITLKPNFVGRKLVDDILKKFNIDSGKLKIKLELNSIEAIKRGVQAGLGVSFVSILMVKDELYSKRLNSVMVNEKKISKRLTLLVNLKINESQLSGKFYKYCIAILKTRLYVKFLNL 951
            MKY PFSLEQLR IQ IKNE T+KQAAKKLYLSQPALSLQI+KLE  I SPILDR+K++IYFT TGELILDYAD+IL LCEEADKA++Y K LKR+SL IGSN  +G YILPKII+LFC+RYSY HIKLEI  TN I+W+I+NGK+DIGIV EEE+PKELY+SLY TP+F EEIVLILPKS++LK   +ITK  LYNL+FITLKP+   RKL+DD+L+++ ID+ +LKIKL+LNSI+A+KR VQAGLGVSFVS LM++DELYSKRL SV VN +KI +R+ L+VNLK ++S+LS  FY YC  ILKT  Y+KFLNL
Sbjct:    1 MKYLPFSLEQLRTIQTIKNEGTVKQAAKKLYLSQPALSLQIKKLESGIKSPILDRKKRKIYFTRTGELILDYADKILNLCEEADKAILYFKNLKRISLNIGSNYTIGKYILPKIINLFCKRYSYAHIKLEISDTNTIAWDIINGKIDIGIVIEEELPKELYSSLYGTPFFLEEIVLILPKSYKLKGSRNITKTNLYNLNFITLKPHLRRRKLMDDLLERYQIDTKQLKIKLQLNSIQAVKRAVQAGLGVSFVSTLMIQDELYSKRLTSVTVNSRKIHERVRLIVNLKTSQSKLSKNFYNYCFGILKTSSYIKFLNL 316          
BLAST of mRNA_M-pyrifera_M_contig11984.4086.1 vs. uniprot
Match: A0A8F0JZN2_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZN2_9PHAE)

HSP 1 Score: 352 bits (903), Expect = 2.990e-118
Identity = 186/317 (58.68%), Postives = 242/317 (76.34%), Query Frame = 1
Query:    4 MKYFPFSLEQLRIIQAIKNEATIKQAAKKLYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKAVVYLKKLKRLSLTIGSNEIVGTYILPKIIDLFCRRYSYTHIKLEIDSTNCISWNIVNGKVDIGIVEEEEIPKELYNSLYSTPYFKEEIVLILPKSHELKNVCSITKEKLYNLDFITLKPNFVGRKLVDDILKKFNIDSGKLKIKLELNSIEAIKRGVQAGLGVSFVSILMVKDELYSKRLNSVMVNEKKISKRLTLLVNLKINESQLSGKFYKYCIAILKTRLYVKFLNLD 954
            M+YFPFSLEQLRI+QAIKNE ++KQAA+KLY+SQPA+SLQIQKLE ++DSP+ +R +KQ+ FT TGELILDYA RIL LCEEA+K+++YLK +KR  L IGS+   GTY+LPKII LFCRRYSY ++KLEI STN  SW++ NG++DIGIV    IPKEL+ SL    Y  +EI LILPK H+L  + SI+K  LY+L FITLK + + RK++D IL +  I+S +L+I+LELNSIEAIK  VQAGLGV+F+SI  + DEL  K++  + V E KI++ L+++ N K   S+L  KF K+C  +L   LY+KFLNL 
Sbjct:    1 MRYFPFSLEQLRILQAIKNEKSLKQAAEKLYISQPAISLQIQKLESKLDSPLFEREQKQVCFTSTGELILDYAARILVLCEEANKSLLYLKDIKRTKLIIGSSNTTGTYLLPKIIGLFCRRYSYANVKLEISSTNRTSWSVANGQIDIGIVGGY-IPKELHQSLQIKKYVNDEIGLILPKFHKLGRLNSISKHDLYDLKFITLKTHSLSRKVMDRILNENKIESSRLRIELELNSIEAIKSAVQAGLGVAFISIFALTDELKLKKIQLLKVKETKINRALSIISNPKGYRSKLLEKFDKHCFDLLTKSLYIKFLNLQ 316          
BLAST of mRNA_M-pyrifera_M_contig11984.4086.1 vs. uniprot
Match: D1GJL4_FUCVE (Probable RuBisCO transcriptional regulator n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJL4_FUCVE)

HSP 1 Score: 350 bits (897), Expect = 2.350e-117
Identity = 180/307 (58.63%), Postives = 235/307 (76.55%), Query Frame = 1
Query:    1 KMKYFPFSLEQLRIIQAIKNEATIKQAAKKLYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKAVVYLKKLKRLSLTIGSNEIVGTYILPKIIDLFCRRYSYTHIKLEIDSTNCISWNIVNGKVDIGIVEEEEIPKELYNSLYSTPYFKEEIVLILPKSHELKNVCSITKEKLYNLDFITLKPNFVGRKLVDDILKKFNIDSGKLKIKLELNSIEAIKRGVQAGLGVSFVSILMVKDELYSKRLNSVMVNEKKISKRLTLLVNLKINESQLSGKFYKYCIAILK 921
            KM YFPFS+EQL +++ IKNE  +K  AKKLY+SQPALSLQIQ LE +I SPIL+R  KQIYFT  G L++ +A  IL+L +EA++++  ++ LK++SL IGSNE +G Y+LPKII LFC+ YSYT I +E+++ +CISWN+ +GKVDIGIV EEEIP EL N L   PY  EEIVLILPK++ LKN   +  E LY LDFI L P+F+ RK+++  L+K+NI   +LKIK ELNSIEAI R V AGLGVSFVSIL +KDEL SKR+NSVM++  +I+KRL++++N K+ +S L  KFY YC  +LK
Sbjct:    5 KMNYFPFSIEQLNLLRTIKNEKNLKNTAKKLYISQPALSLQIQNLESKIASPILERNNKQIYFTIIGHLLVKHATEILQLYKEANESIKLIRVLKKISLIIGSNESIGIYLLPKIIRLFCKYYSYTCITVELETNHCISWNVFHGKVDIGIVAEEEIPYELLNILDIIPYINEEIVLILPKTYPLKNPNILALEDLYKLDFIGLNPDFMERKILNKTLQKYNIKIEQLKIKFELNSIEAIIRAVNAGLGVSFVSILAIKDELLSKRINSVMIDGIRINKRLSIIINNKVYKSLLFKKFYHYCFFLLK 311          
BLAST of mRNA_M-pyrifera_M_contig11984.4086.1 vs. uniprot
Match: A0A0Y0K8G7_9PHAE (Probable RuBisCO transcriptional regulator n=13 Tax=Sargassum TaxID=3015 RepID=A0A0Y0K8G7_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 7.030e-115
Identity = 179/308 (58.12%), Postives = 235/308 (76.30%), Query Frame = 1
Query:    4 MKYFPFSLEQLRIIQAIKNEATIKQAAKKLYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKAVVYLKKLKRLSLTIGSNEIVGTYILPKIIDLFCRRYSYTHIKLEIDSTNCISWNIVNGKVDIGIVEEEEIPKELYNSLYSTPYFKEEIVLILPKSHELKNVCSITKEKLYNLDFITLKPNFVGRKLVDDILKKFNIDSGKLKIKLELNSIEAIKRGVQAGLGVSFVSILMVKDELYSKRLNSVMVNEKKISKRLTLLVNLKINESQLSGKFYKYCIAILKTR 927
            MK F F++EQL +++AIKNE +IK AAKKLYLSQPALSL+IQ LE +I SPIL+R KKQIYFT  G L++ Y+ +IL+L  EA+ ++ ++K L+++SL IGSNE +G Y+LPKII LFC+ YSY  + LEI++T+ ISWN+ +GKVDIGIV EEEIP E+ N +Y  PY  EEIVLILPK+++LK    IT E+LY LDFI L  + + RK+++ IL+K+NI    LK K ELNS EAI RGVQAGLGVSFVSIL VKDEL SKR+NSVMVN ++I+KR+++++N K   S L   FY +C  + K +
Sbjct:    1 MKDFLFNMEQLNVLRAIKNEKSIKDAAKKLYLSQPALSLKIQSLESKIASPILERNKKQIYFTIIGHLLVKYSTKILQLYHEANHSIKHIKVLRKISLIIGSNESIGIYLLPKIIRLFCKAYSYACLTLEIEATHSISWNVFHGKVDIGIVVEEEIPYEVMNYIYIIPYLDEEIVLILPKTYQLKTPSVITLEELYKLDFIGLNRDLMERKILNKILQKYNIKVENLKTKFELNSTEAIIRGVQAGLGVSFVSILSVKDELLSKRINSVMVNSRRINKRISIIMNKKSYHSPLFKNFYTFCCFLRKNK 308          
BLAST of mRNA_M-pyrifera_M_contig11984.4086.1 vs. uniprot
Match: A0A1L2F1W5_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1W5_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 3.280e-113
Identity = 174/308 (56.49%), Postives = 236/308 (76.62%), Query Frame = 1
Query:    4 MKYFPFSLEQLRIIQAIKNEATIKQAAKKLYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKAVVYLKKLKRLSLTIGSNEIVGTYILPKIIDLFCRRYSYTHIKLEIDSTNCISWNIVNGKVDIGIVEEEEIPKELYNSLYSTPYFKEEIVLILPKSHELKNVCSITKEKLYNLDFITLKPNFVGRKLVDDILKKFNIDSGKLKIKLELNSIEAIKRGVQAGLGVSFVSILMVKDELYSKRLNSVMVNEKKISKRLTLLVNLKINESQLSGKFYKYCIAILKTR 927
            MK F F++EQL +++AIKNE ++K AAKKLYLSQPALSL+IQ LE +I SPIL+R KKQIYFT  G L+++Y+ +IL+L  EA+ ++ Y+K L+R+SL IGSNE +G Y+LPKII LFC+ +SY  + LEI++T+ ISW++ +GK+DIGIV EEEIP E+ N +Y+ PY  EEIVLILPK+++LKN+  IT E+LY LDFI L  +   RK+++ IL+K+NI    LK K ELNSIEAI RGVQAGLGVSFVSIL VKD+L SKR+NS  ++  +I+KR+++++N K   S L   FY +C  + K +
Sbjct:    1 MKDFLFNMEQLNVLRAIKNEKSLKDAAKKLYLSQPALSLKIQSLESKIASPILERNKKQIYFTIIGHLLVEYSTKILQLYNEANHSIKYIKVLRRISLIIGSNESIGIYLLPKIIKLFCKSHSYACLTLEIEATHSISWDVFHGKIDIGIVGEEEIPYEVVNYIYTIPYLDEEIVLILPKTYQLKNLNIITLEELYKLDFIGLNQDLTERKILNKILQKYNIKIENLKTKFELNSIEAIIRGVQAGLGVSFVSILAVKDQLLSKRINSATIDGMRINKRISIIMNNKSYHSALFKNFYTFCYFLRKNK 308          
BLAST of mRNA_M-pyrifera_M_contig11984.4086.1 vs. uniprot
Match: A0A6B7EV91_9PHAE (Putative RuBisCO transcriptional regulator n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EV91_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 1.310e-112
Identity = 175/319 (54.86%), Postives = 232/319 (72.73%), Query Frame = 1
Query:    4 MKYFPFSLEQLRIIQAIKNEATI--KQAAKKLYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKAVVYLKKLKRLSLTIGSNEIVGTYILPKIIDLFCRRYSYTHIKLEIDSTNCISWNIVNGKVDIGIVEEEEIPKELYNSLYSTPYFKEEIVLILPKSHELKNVCSITKEKLYNLDFITLKPNFVGRKLVDDILKKFNIDSGKLKIKLELNSIEAIKRGVQAGLGVSFVSILMVKDELYSKRLNSVMVNEKKISKRLTLLVNLKINESQLSGKFYKYCIAILKTRLYVKFLNLD 954
            MKYFPFSL+QL+++QAIKNE  I  K A+K LYLSQP LS +I+  ++   S IL R+K QIYFT  GEL+LDYA++IL+LC+EAD A+ + KKLKR  L IGSN+ +G  IL K+I+LFC+RY Y H++L+I  T  +SW++VNGK+DIGIV+EEE+PK LY SLY TPYF+E++VLI+ K  + K    +  E LY L+FITLKP F  RK +D  LK FN++  +L I LELNS +AI+  V+AG GVSF+  ++VK  +YSK+L S++++    SK+  L VNLK NES L  +FY YC  ILK  +Y KFLNL 
Sbjct:    1 MKYFPFSLKQLKVLQAIKNEGNINIKIASKNLYLSQPTLSSKIKIFQHNPYSKILVRKKNQIYFTSEGELVLDYANKILKLCKEADNAIAFFKKLKRFRLKIGSNKTIGKNILLKLINLFCKRYPYAHVQLQIGCTKSLSWDLVNGKIDIGIVQEEEVPKNLYYSLYFTPYFEEKLVLIIAKFQKQKYKNRMNSENLYQLNFITLKPGFQERKFMDTNLKNFNVNLKELNIILELNSTQAIENAVRAGFGVSFLPSMVVKHNIYSKQLQSLLIDGLNNSKKFLLGVNLKKNESYLCERFYNYCFIILKLNIYNKFLNLS 319          
BLAST of mRNA_M-pyrifera_M_contig11984.4086.1 vs. uniprot
Match: A0A5A4MHG3_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Hapterophycus canaliculatus TaxID=2567908 RepID=A0A5A4MHG3_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 1.030e-111
Identity = 172/318 (54.09%), Postives = 236/318 (74.21%), Query Frame = 1
Query:    4 MKYFPFSLEQLRIIQAIKNEATIKQAAKKLYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKAVVYLKKLKRLSLTIGSNEIVGTYILPKIIDLFCRRYSYTHIKLEIDSTNCISWNIVNGKVDIGIVEEEEIPKELYNSLYSTPYFKEEIVLILPKSHELKNVCSITKEKLYNLDFITLKPNFVGRKLVDDILKKFNIDSGKLKIKLELNSIEAIKRGVQAGLGVSFVSILMVKDELYSKRLNSVMVNEKKISKRLTLLVNLKINESQLSGKFYKYCIAILKTRLYVKFLNLDY 957
            MK F F+LEQL+IIQA+KNE  +K  AK LYLSQPALSLQI+ LE  + S IL R+KKQIYFT  GELILDYA++IL LCEE DKAV+ LK  K+ SL +GS++ +G YI  K+IDLF +RY YTH++L+I ST  ISW I+NGK+DIGIV++  +P+ +YNSL  TPYF++++VLILPK+++ K   +I+ +   +L+FI  K  F  RK +D+ILKKF+    +LKI LELNSI A+KR V  GLGVSF+S ++VK+ELY+K ++S+ +       + T++V+LK NES L  +FY YC+ + ++  Y KFLNL++
Sbjct:    1 MKNFSFNLEQLKIIQAVKNEGNLKTVAKFLYLSQPALSLQIKNLEENLYSKILIRKKKQIYFTPEGELILDYANKILELCEEVDKAVLCLKNFKKFSLRVGSDKSIGEYISIKLIDLFSKRYPYTHVQLKISSTQNISWEIINGKIDIGIVQDNMVPRNIYNSLSVTPYFQDKMVLILPKTYKQKFPTNISGKNFRDLNFIATKSYFAERKPIDNILKKFSTPQKQLKINLELNSINALKRAVGDGLGVSFLSTMLVKEELYAKSIHSLRIEGIDNHNQFTIIVSLKNNESYLCEQFYNYCLILARSNFYNKFLNLEF 318          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11984.4086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0R6LUS1_UNDPI6.920e-20490.57Probable RuBisCO transcriptional regulator n=29 Ta... [more]
A0A8F0F6V8_AKKLU6.620e-17981.65Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A8F0F7X1_9PHAE3.820e-17880.38Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A8F0F9M1_9PHAE1.700e-15571.20Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A8F0JZN2_9PHAE2.990e-11858.68Probable RuBisCO transcriptional regulator n=1 Tax... [more]
D1GJL4_FUCVE2.350e-11758.63Probable RuBisCO transcriptional regulator n=3 Tax... [more]
A0A0Y0K8G7_9PHAE7.030e-11558.12Probable RuBisCO transcriptional regulator n=13 Ta... [more]
A0A1L2F1W5_9PHAE3.280e-11356.49Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A6B7EV91_9PHAE1.310e-11254.86Putative RuBisCO transcriptional regulator n=1 Tax... [more]
A0A5A4MHG3_9PHAE1.030e-11154.09Probable RuBisCO transcriptional regulator n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11984contigM-pyrifera_M_contig11984:5983..6942 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score333.6
Seed ortholog evalue1e-88
Seed eggNOG ortholog2880.D1J7C3
Preferred namerbcR
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.DNA-binding transcription factor activity
EggNOG OGs2S17Z@2759,COG0583@1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size960
Cds size957
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815717.9523778-UTR-M-pyrifera_M_contig11984:5982..59851622815717.9523778-UTR-M-pyrifera_M_contig11984:5982..5985Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11984 5983..5985 +
1692277536.5340862-UTR-M-pyrifera_M_contig11984:5982..59851692277536.5340862-UTR-M-pyrifera_M_contig11984:5982..5985Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11984 5983..5985 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815717.9675307-CDS-M-pyrifera_M_contig11984:5985..69421622815717.9675307-CDS-M-pyrifera_M_contig11984:5985..6942Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11984 5986..6942 +
1692277536.546077-CDS-M-pyrifera_M_contig11984:5985..69421692277536.546077-CDS-M-pyrifera_M_contig11984:5985..6942Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11984 5986..6942 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11984.4086.1prot_M-pyrifera_M_contig11984.4086.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11984 5986..6942 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11984.4086.1

>prot_M-pyrifera_M_contig11984.4086.1 ID=prot_M-pyrifera_M_contig11984.4086.1|Name=mRNA_M-pyrifera_M_contig11984.4086.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=319bp
MKYFPFSLEQLRIIQAIKNEATIKQAAKKLYLSQPALSLQIQKLEYEIDS
PILDRRKKQIYFTFTGELILDYADRILRLCEEADKAVVYLKKLKRLSLTI
GSNEIVGTYILPKIIDLFCRRYSYTHIKLEIDSTNCISWNIVNGKVDIGI
VEEEEIPKELYNSLYSTPYFKEEIVLILPKSHELKNVCSITKEKLYNLDF
ITLKPNFVGRKLVDDILKKFNIDSGKLKIKLELNSIEAIKRGVQAGLGVS
FVSILMVKDELYSKRLNSVMVNEKKISKRLTLLVNLKINESQLSGKFYKY
CIAILKTRLYVKFLNLDY*
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mRNA from alignment at M-pyrifera_M_contig11984:5983..6942+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11984.4086.1 ID=mRNA_M-pyrifera_M_contig11984.4086.1|Name=mRNA_M-pyrifera_M_contig11984.4086.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=960bp|location=Sequence derived from alignment at M-pyrifera_M_contig11984:5983..6942+ (Macrocystis pyrifera P11B4 male)
AAAATGAAATATTTCCCATTTAGCCTTGAGCAATTAAGAATTATTCAAGC AATAAAAAATGAAGCTACAATAAAACAAGCGGCTAAAAAATTATATCTGT CACAACCAGCACTTAGTTTACAAATCCAGAAATTAGAATATGAGATTGAT TCTCCCATTTTGGACCGAAGAAAAAAACAAATTTATTTTACTTTTACGGG AGAATTAATACTAGATTACGCGGATAGAATTTTAAGATTATGTGAAGAAG CTGATAAAGCTGTCGTTTATTTAAAAAAGTTAAAGAGGCTTAGTCTGACT ATTGGCTCTAATGAAATAGTGGGAACATATATATTACCAAAAATCATTGA TTTATTTTGTAGGCGTTATTCATATACACATATTAAGCTAGAAATTGATT CTACTAATTGTATTTCTTGGAATATTGTTAATGGTAAAGTTGATATAGGA ATTGTTGAAGAAGAGGAAATACCTAAGGAATTATATAACTCATTGTATAG TACACCTTATTTCAAAGAAGAAATAGTTTTAATTTTACCCAAATCTCATG AATTGAAGAATGTCTGTAGTATAACTAAAGAAAAATTATATAATTTAGAT TTTATTACTTTAAAACCTAATTTTGTAGGTAGGAAATTAGTAGACGATAT TTTAAAAAAATTTAATATAGATAGCGGTAAATTAAAAATAAAACTTGAAC TTAATTCTATTGAGGCTATTAAACGTGGTGTTCAAGCTGGGTTAGGCGTT TCATTTGTCTCTATTCTTATGGTTAAAGATGAATTATATTCTAAACGTCT TAATTCAGTCATGGTTAATGAGAAAAAGATAAGTAAGCGTTTAACATTAC TTGTTAACTTAAAAATCAATGAGTCACAATTATCTGGAAAATTTTATAAG TATTGTATTGCTATCTTAAAAACGCGTTTATATGTTAAGTTTCTTAATTT AGATTATTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11984:5983..6942+

>mRNA_M-pyrifera_M_contig11984.4086.1 ID=mRNA_M-pyrifera_M_contig11984.4086.1|Name=mRNA_M-pyrifera_M_contig11984.4086.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1914bp|location=Sequence derived from alignment at M-pyrifera_M_contig11984:5983..6942+ (Macrocystis pyrifera P11B4 male)
ATGAAATATTTCCCATTTAGCCTTGAGCAATTAAGAATTATTCAAGCAAT
AAAAAATGAAGCTACAATAAAACAAGCGGCTAAAAAATTATATCTGTCAC
AACCAGCACTTAGTTTACAAATCCAGAAATTAGAATATGAGATTGATTCT
CCCATTTTGGACCGAAGAAAAAAACAAATTTATTTTACTTTTACGGGAGA
ATTAATACTAGATTACGCGGATAGAATTTTAAGATTATGTGAAGAAGCTG
ATAAAGCTGTCGTTTATTTAAAAAAGTTAAAGAGGCTTAGTCTGACTATT
GGCTCTAATGAAATAGTGGGAACATATATATTACCAAAAATCATTGATTT
ATTTTGTAGGCGTTATTCATATACACATATTAAGCTAGAAATTGATTCTA
CTAATTGTATTTCTTGGAATATTGTTAATGGTAAAGTTGATATAGGAATT
GTTGAAGAAGAGGAAATACCTAAGGAATTATATAACTCATTGTATAGTAC
ACCTTATTTCAAAGAAGAAATAGTTTTAATTTTACCCAAATCTCATGAAT
TGAAGAATGTCTGTAGTATAACTAAAGAAAAATTATATAATTTAGATTTT
ATTACTTTAAAACCTAATTTTGTAGGTAGGAAATTAGTAGACGATATTTT
AAAAAAATTTAATATAGATAGCGGTAAATTAAAAATAAAACTTGAACTTA
ATTCTATTGAGGCTATTAAACGTGGTGTTCAAGCTGGGTTAGGCGTTTCA
TTTGTCTCTATTCTTATGGTTAAAGATGAATTATATTCTAAACGTCTTAA
TTCAGTCATGGTTAATGAGAAAAAGATAAGTAAGCGTTTAACATTACTTG
TTAACTTAAAAATCAATGAGTCACAATTATCTGGAAAATTTTATAAGTAT
TGTATTGCTATCTTAAAAACGCGTTTATATGTTAAGTTTCTTAATTTAGA
TTATTAGATGAAATATTTCCCATTTAGCCTTGAGCAATTAAGAATTATTC
AAGCAATAAAAAATGAAGCTACAATAAAACAAGCGGCTAAAAAATTATAT
CTGTCACAACCAGCACTTAGTTTACAAATCCAGAAATTAGAATATGAGAT
TGATTCTCCCATTTTGGACCGAAGAAAAAAACAAATTTATTTTACTTTTA
CGGGAGAATTAATACTAGATTACGCGGATAGAATTTTAAGATTATGTGAA
GAAGCTGATAAAGCTGTCGTTTATTTAAAAAAGTTAAAGAGGCTTAGTCT
GACTATTGGCTCTAATGAAATAGTGGGAACATATATATTACCAAAAATCA
TTGATTTATTTTGTAGGCGTTATTCATATACACATATTAAGCTAGAAATT
GATTCTACTAATTGTATTTCTTGGAATATTGTTAATGGTAAAGTTGATAT
AGGAATTGTTGAAGAAGAGGAAATACCTAAGGAATTATATAACTCATTGT
ATAGTACACCTTATTTCAAAGAAGAAATAGTTTTAATTTTACCCAAATCT
CATGAATTGAAGAATGTCTGTAGTATAACTAAAGAAAAATTATATAATTT
AGATTTTATTACTTTAAAACCTAATTTTGTAGGTAGGAAATTAGTAGACG
ATATTTTAAAAAAATTTAATATAGATAGCGGTAAATTAAAAATAAAACTT
GAACTTAATTCTATTGAGGCTATTAAACGTGGTGTTCAAGCTGGGTTAGG
CGTTTCATTTGTCTCTATTCTTATGGTTAAAGATGAATTATATTCTAAAC
GTCTTAATTCAGTCATGGTTAATGAGAAAAAGATAAGTAAGCGTTTAACA
TTACTTGTTAACTTAAAAATCAATGAGTCACAATTATCTGGAAAATTTTA
TAAGTATTGTATTGCTATCTTAAAAACGCGTTTATATGTTAAGTTTCTTA
ATTTAGATTATTAG
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