mRNA_M-pyrifera_M_contig119839.4083.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A7C1CMU1_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C1CMU1_9BACT) HSP 1 Score: 251 bits (642), Expect = 1.200e-79 Identity = 132/186 (70.97%), Postives = 148/186 (79.57%), Query Frame = 1
Query: 1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATD-AWKSALTGLDI-----TWLDAFLGKVPGSMGETSVLACLIGAGILIMT 540
C HGALY+LPI IVTF VGG IEVLFA+I KHEVNEGF VTG L PLILPPTIPLWQVAL FGVIIGKE FGGTGMNIFNPAL ARAFL+FAYPAQ SG+ VW V A VDGFSGAT L VA + DPGA+D A+++A+T ++I TWLDAFLG +PGS+GETS LACL+GA +LI T
Sbjct: 113 CFAHGALYFLPIFIVTFAVGGGIEVLFAMINKHEVNEGFFVTGFLIPLILPPTIPLWQVALATAFGVIIGKEAFGGTGMNIFNPALVARAFLYFAYPAQNSGEDVWVPVAAEKAVDGFSGATLLARVAEI-DPGASDKAYQAAVTAMEINGRAATWLDAFLGSIPGSIGETSTLACLLGAALLIFT 297
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A3M2C2N3_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M2C2N3_9BACT) HSP 1 Score: 248 bits (634), Expect = 1.370e-78 Identity = 128/182 (70.33%), Postives = 147/182 (80.77%), Query Frame = 1
Query: 1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATAL--GAVAGVTDPGATDAWKSALTGLDITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 540
C+ HGALYYLP+L+VTF+VGG+ E LFA++R+HE+NEGFLVTGMLFPL+LPPTIPLWQVALGI FGV++GKEIFGGTGMN+ NPALTARAFLFFAYPA+ISGDKVW + A DG+SGATAL GAV G+ T S W DAFLG VPGSMGETSVLACLIGA IL++T
Sbjct: 114 CIVHGALYYLPVLLVTFLVGGNAEALFAVVRRHEINEGFLVTGMLFPLVLPPTIPLWQVALGILFGVVVGKEIFGGTGMNVLNPALTARAFLFFAYPAEISGDKVW--IAAQTSPDGYSGATALANGAVGGLPSIEQTTGGMS--------WWDAFLGLVPGSMGETSVLACLIGALILLLT 285
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A6L8HSV1_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=2 Tax=Acidobacteriia bacterium TaxID=2081523 RepID=A0A6L8HSV1_9BACT) HSP 1 Score: 246 bits (629), Expect = 6.940e-78 Identity = 127/180 (70.56%), Postives = 146/180 (81.11%), Query Frame = 1
Query: 1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALTGLDITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 540
C+ HGALYYLP+LIVTF VGG+ E LFA++RKH++NEGFLVTGMLFPL+LPPTIPLWQVALGI FGVIIGKEIFGGTGMNIFNPAL +RAFLFFAYPAQISGD+VW + A VDG SGAT L A A ++ P AL G ++W+ AF+G VPGSMGETS LACLIGA +L+ T
Sbjct: 112 CILHGALYYLPVLIVTFAVGGNCEALFAVVRKHDINEGFLVTGMLFPLVLPPTIPLWQVALGIAFGVIIGKEIFGGTGMNIFNPALMSRAFLFFAYPAQISGDQVW--IAADTTVDGSSGATWL-AEAALSGP-------EALAGGSVSWMQAFVGFVPGSMGETSTLACLIGALVLVAT 281
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A1V5YVQ9_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YVQ9_9BACT) HSP 1 Score: 245 bits (625), Expect = 4.350e-77 Identity = 122/185 (65.95%), Postives = 143/185 (77.30%), Query Frame = 1
Query: 1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALT-----GLDITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 540
C HGALY+LP+LIVTF+VGG IEV AIIRKH+VNEGF VTG L PLILPPTIPLWQVAL FGV+IGKE+FGGTGMNIFNPAL RAFL+FAYP Q SGDKVW A+ + DGFSGAT L VA + AW++A++ G ++WLDAF+G +PGSMGETS LACL+GA IL++T
Sbjct: 113 CFVHGALYFLPVLIVTFMVGGSIEVAVAIIRKHDVNEGFFVTGFLIPLILPPTIPLWQVALATAFGVVIGKEVFGGTGMNIFNPALVTRAFLYFAYPIQSSGDKVWVALNPAQAADGFSGATLLARVAEIPPVADGQAWQTAVSTMQINGKAVSWLDAFIGWIPGSMGETSTLACLVGAAILLIT 297
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A1V6F0H7_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=2 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin101 TaxID=1852847 RepID=A0A1V6F0H7_9BACT) HSP 1 Score: 245 bits (625), Expect = 4.350e-77 Identity = 123/185 (66.49%), Postives = 143/185 (77.30%), Query Frame = 1
Query: 1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALTGLDI-----TWLDAFLGKVPGSMGETSVLACLIGAGILIMT 540
CL HGALY++P+L+V FVVGG IEV A+I+KHEVNEGF VTG L P ILPPTIPLWQVAL FGV+IGKEIFGGTGMNIFNPAL RAFL+FAYP Q SGDKVW AV+ VDGFSGAT L +A + A A+ +A+ G+ + TW+DAFLG +PGSMGETS LACLIGA +LI+T
Sbjct: 113 CLVHGALYFIPVLVVAFVVGGGIEVFVAMIKKHEVNEGFFVTGFLIPCILPPTIPLWQVALATAFGVVIGKEIFGGTGMNIFNPALVTRAFLYFAYPIQNSGDKVWVAVSPEQAVDGFSGATLLARIAEIPPDTADKAYATAINGMVVNGKMVTWMDAFLGWIPGSMGETSTLACLIGAALLILT 297
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A6L7UAK4_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L7UAK4_9BACT) HSP 1 Score: 243 bits (619), Expect = 2.360e-76 Identity = 126/180 (70.00%), Postives = 142/180 (78.89%), Query Frame = 1
Query: 1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALTGLDITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 540
C+ HGALYYLP+L+VTF++GGH E LF+++R+HE+NEGFLVTGMLFPL LPPTIPLWQVALGI FG+IIGKEIFGGTGMNI NPALTARAFLFFAYPA+ISGDKVW V A DG SGAT L A T + L GL +W DAFLG +PGSMGETS L CLIGA ILI+T
Sbjct: 115 CMLHGALYYLPVLLVTFLIGGHCEALFSVVRRHEINEGFLVTGMLFPLTLPPTIPLWQVALGIAFGIIIGKEIFGGTGMNILNPALTARAFLFFAYPAEISGDKVW--VAAQTSADGVSGATWLAEAA-------TLGHQVLLDGL--SWWDAFLGLIPGSMGETSTLGCLIGALILIVT 283
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A2D8R658_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2D8R658_9BACT) HSP 1 Score: 241 bits (615), Expect = 8.920e-76 Identity = 126/180 (70.00%), Postives = 141/180 (78.33%), Query Frame = 1
Query: 1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALTGLDITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 540
C+ HGALYYLP+L+VTF VGG E LFAI+R+HE+NEGFLVTGMLFPLILPPTIPLWQ ALGI+FGV+IGKEIFGGTGMNI NPALTARAF+FFAYPA +SGD VW A T SN DG SGAT L A LTGLD W DAF+G VPGSMGETS LACL+GA +L++T
Sbjct: 114 CVIHGALYYLPVLMVTFAVGGAWEALFAIVRRHEINEGFLVTGMLFPLILPPTIPLWQAALGISFGVVIGKEIFGGTGMNILNPALTARAFIFFAYPADMSGDAVWVAATTSN--DGVSGATWLAQTA--------LGGAEVLTGLD--WEDAFIGFVPGSMGETSTLACLLGAAVLVIT 281
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A6B0W0Q8_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=6 Tax=Holophagales bacterium TaxID=2478486 RepID=A0A6B0W0Q8_9BACT) HSP 1 Score: 241 bits (614), Expect = 1.960e-75 Identity = 120/181 (66.30%), Postives = 146/181 (80.66%), Query Frame = 1
Query: 10 HGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASN--QVDGFSGATALGAVAGVTDPGATDAWKSALTGLD--ITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 540
HGALYY+P+L+VTF VGG E LFA++R+H+VNEGFLVTGMLFPL+LPPTIPLWQVA+GI+FGV++GKEIFGGTG N+ NPALTAR FLFFAYPAQISGD VW + S+ DG+SGATALG +A + +DA L+ ++ ++W+ AFLG +PGSMGETS LACLIGA ILI T
Sbjct: 117 HGALYYVPVLVVTFAVGGAWEGLFAVVRRHDVNEGFLVTGMLFPLVLPPTIPLWQVAVGISFGVVVGKEIFGGTGYNVLNPALTARVFLFFAYPAQISGDAVWISARTSSGKDADGYSGATALGEIAVLEAVEGSDAPLDGLSAIEGKVSWMQAFLGDIPGSMGETSALACLIGAAILIAT 297
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A831ZKD3_9DELT (Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A831ZKD3_9DELT) HSP 1 Score: 239 bits (610), Expect = 5.490e-75 Identity = 124/180 (68.89%), Postives = 139/180 (77.22%), Query Frame = 1
Query: 1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALTGLDITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 540
C HG LY+LP+ VT VGG+IEV+FAI+R+HEV EGFLVTGMLFPLILPPTIPLWQVALGI FGVI+ KE+FGG GMN+ NPALT+RAFLFFAYPA ISGD VW AV + DG SGAT L A DPG ALT ITW+DAF+G +PGSMGETS LACLIGA ILI+T
Sbjct: 114 CSMHGLLYFLPVYAVTMFVGGNIEVIFAIVRRHEVTEGFLVTGMLFPLILPPTIPLWQVALGIAFGVILAKEVFGGVGMNVLNPALTSRAFLFFAYPAAISGDAVWRAVQPTMLADGMSGATWLANAA--ADPG-------ALTNGTITWMDAFIGTIPGSMGETSALACLIGAAILIIT 284
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A2E4KS06_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=6 Tax=root TaxID=1 RepID=A0A2E4KS06_9BACT) HSP 1 Score: 237 bits (604), Expect = 4.040e-74 Identity = 125/180 (69.44%), Postives = 141/180 (78.33%), Query Frame = 1
Query: 1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALTGLDITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 540
C+ HGALYYLP+L VTF VGG E LFAI+RKHE+NEGFLVTGMLFPLILPPTIPLWQVALGI+FGV+IGKEIFGGTGMN+ NPALTARAF+FFAYPA +SGD W +TA+ DG SGAT L A D AL GLD W +AF+G VPGSMGETS LACL+GA +LI+T
Sbjct: 114 CVIHGALYYLPVLGVTFAVGGAWEALFAIVRKHEINEGFLVTGMLFPLILPPTIPLWQVALGISFGVVIGKEIFGGTGMNVLNPALTARAFVFFAYPANMSGDTAW--ITAATNTDGVSGATWLALTALDGD--------QALAGLD--WGEAFMGFVPGSMGETSALACLLGAAVLIIT 281 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119839.4083.1 >prot_M-pyrifera_M_contig119839.4083.1 ID=prot_M-pyrifera_M_contig119839.4083.1|Name=mRNA_M-pyrifera_M_contig119839.4083.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILback to top mRNA from alignment at M-pyrifera_M_contig119839:1..540- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119839.4083.1 ID=mRNA_M-pyrifera_M_contig119839.4083.1|Name=mRNA_M-pyrifera_M_contig119839.4083.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig119839:1..540- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119839:1..540- >mRNA_M-pyrifera_M_contig119839.4083.1 ID=mRNA_M-pyrifera_M_contig119839.4083.1|Name=mRNA_M-pyrifera_M_contig119839.4083.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1080bp|location=Sequence derived from alignment at M-pyrifera_M_contig119839:1..540- (Macrocystis pyrifera P11B4 male)back to top |