mRNA_M-pyrifera_M_contig119799.4068.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119799.4068.1 vs. uniprot
Match: A0A6V2PXT2_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2PXT2_EMIHU) HSP 1 Score: 107 bits (268), Expect = 6.690e-24 Identity = 67/179 (37.43%), Postives = 94/179 (52.51%), Query Frame = 1
Query: 1 GCVCLLHGQAGTGKAMACDVVGFELGRPLLVVSAATLLSRHSYRD-NAIGKLFKDAKKAGAVLCIRNFCRLF-----DALATAGPTAIDVGLLMHHITQYSVTGVIVLTAASLDGIEQSVLGHVRHTIELPMPGQQERQALWRGCTPSAVPLAADVDFKALALKFRLSGGQISAAVFEA 519
G L HG GTGK MA + VGF++GRPL+VV+ A L+ ++ I K+F +AK AVL LF + +TA ++++G+L+HH+ +S GV+V I+ + + +E P P R LWR P PL ADVDF L + LSGG I +AVF A
Sbjct: 681 GIAALFHGPPGTGKTMAAEAVGFDIGRPLMVVNCAQLMDKYVGESAKNIEKVFDEAKAQEAVLVFDECEGLFAERSSEGGSTARHDSMNIGVLLHHMETFS--GVVVAITNRFQQIDSAFHRRFKFILEFPTPNAAARGRLWRLLVPKEAPLHADVDFARLGESYELSGGSIKSAVFRA 857
BLAST of mRNA_M-pyrifera_M_contig119799.4068.1 vs. uniprot
Match: A0A7S3W9A5_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W9A5_EMIHU) HSP 1 Score: 107 bits (268), Expect = 6.700e-24 Identity = 67/179 (37.43%), Postives = 94/179 (52.51%), Query Frame = 1
Query: 1 GCVCLLHGQAGTGKAMACDVVGFELGRPLLVVSAATLLSRHSYRD-NAIGKLFKDAKKAGAVLCIRNFCRLF-----DALATAGPTAIDVGLLMHHITQYSVTGVIVLTAASLDGIEQSVLGHVRHTIELPMPGQQERQALWRGCTPSAVPLAADVDFKALALKFRLSGGQISAAVFEA 519
G L HG GTGK MA + VGF++GRPL+VV+ A L+ ++ I K+F +AK AVL LF + +TA ++++G+L+HH+ +S GV+V I+ + + +E P P R LWR P PL ADVDF L + LSGG I +AVF A
Sbjct: 687 GIAALFHGPPGTGKTMAAEAVGFDIGRPLMVVNCAQLMDKYVGESAKNIEKVFDEAKAQEAVLVFDECEGLFAERSSEGGSTARHDSMNIGVLLHHMETFS--GVVVAITNRFQQIDSAFHRRFKFILEFPTPNAAARGRLWRLLVPKEAPLHADVDFARLGESYELSGGSIKSAVFRA 863
BLAST of mRNA_M-pyrifera_M_contig119799.4068.1 vs. uniprot
Match: R1FMX3_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FMX3_EMIHU) HSP 1 Score: 107 bits (268), Expect = 6.820e-24 Identity = 67/179 (37.43%), Postives = 94/179 (52.51%), Query Frame = 1
Query: 1 GCVCLLHGQAGTGKAMACDVVGFELGRPLLVVSAATLLSRHSYRD-NAIGKLFKDAKKAGAVLCIRNFCRLF-----DALATAGPTAIDVGLLMHHITQYSVTGVIVLTAASLDGIEQSVLGHVRHTIELPMPGQQERQALWRGCTPSAVPLAADVDFKALALKFRLSGGQISAAVFEA 519
G L HG GTGK MA + VGF++GRPL+VV+ A L+ ++ I K+F +AK AVL LF + +TA ++++G+L+HH+ +S GV+V I+ + + +E P P R LWR P PL ADVDF L + LSGG I +AVF A
Sbjct: 818 GIAALFHGPPGTGKTMAAEAVGFDIGRPLMVVNCAQLMDKYVGESAKNIEKVFDEAKAQEAVLVFDECEGLFAERSSEGGSTARHDSMNIGVLLHHMETFS--GVVVAITNRFQQIDSAFHRRFKFILEFPTPNAAARGRLWRLLVPKEAPLHADVDFARLGESYELSGGSIKSAVFRA 994
BLAST of mRNA_M-pyrifera_M_contig119799.4068.1 vs. uniprot
Match: A0A0G4HU76_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HU76_9ALVE) HSP 1 Score: 106 bits (265), Expect = 1.760e-23 Identity = 67/185 (36.22%), Postives = 99/185 (53.51%), Query Frame = 1
Query: 1 GCVCLLHGQAGTGKAMACDVVGFELGRPLLVVSAATLLSRH-SYRDNAIGKLFKDAKKAGAVLCIRNFCRLF-----DALATAGP-TAIDVGLLMHHITQYSVTGVIVLTAASLDGIEQSVLGHVRHTIELPMPGQQERQALWRGCTPSAVPLAADVDFKALALKFRLSGGQISAAVFEACSAAA 534
G L HG GTGK MA + +G++LG+PL +V+ L+S+ I +F +AK GAVL LF D A++G ++VGLL+HHI ++ GV ++ + I+ + L + +E P P Q R LWR P+ P A DV+F+ L +F SGG I +A+F A + AA
Sbjct: 1009 GTAALFHGPPGTGKTMAAEAIGYDLGKPLKMVNVGQLMSKWVGETGKNIEAVFNEAKAVGAVLVFDEAEGLFGARQQDTGASSGRHDTLNVGLLLHHIETFA--GVTIVVTNFVQAIDSAFLRRFKFVLEFPQPDAQLRGRLWRLLLPAETPTAPDVNFEDLGRRFDFSGGSIKSAIFRAAARAA 1191
BLAST of mRNA_M-pyrifera_M_contig119799.4068.1 vs. uniprot
Match: A0A1Y1INA4_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1INA4_KLENI) HSP 1 Score: 105 bits (263), Expect = 2.710e-23 Identity = 63/185 (34.05%), Postives = 101/185 (54.59%), Query Frame = 1
Query: 1 GCVCLLHGQAGTGKAMACDVVGFELGRPLLVVSAATLLSRH-SYRDNAIGKLFKDAKKAGAVLCIRNFCRLFDA--LATAGPTA----IDVGLLMHHITQYSVTGVIVLTAASLDGIEQSVLGHVRHTIELPMPGQQERQALWRGCTPSAVPLAADVDFKALALKFRLSGGQISAAVFEACSAAA 534
G CL HG GTGK MA + +GFE+G+P+ V+ A L++++ I K+F++AK A+L LF A A G A +DVGL +HH+ ++ G +VL ++D I+++ ++ +E P + R LW+ P VP+ +D+ L +F +GG I++AVF A + AA
Sbjct: 380 GISCLFHGLPGTGKTMAAECLGFEMGKPIKFVNCAELVNKYVGETGKNIEKVFEEAKMLDALLVFDEAEGLFGARHAADTGSAARYANMDVGLQLHHLERFP--GALVLITNTIDNIDKAFFRRIKFVLEFESPDAKLRAKLWKSMIPDKVPVEGTIDYDLLGQRFEYAGGSIASAVFRAAARAA 562
BLAST of mRNA_M-pyrifera_M_contig119799.4068.1 vs. uniprot
Match: A0A7S0Q0P9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q0P9_9EUKA) HSP 1 Score: 102 bits (253), Expect = 6.740e-22 Identity = 63/179 (35.20%), Postives = 95/179 (53.07%), Query Frame = 1
Query: 1 GCVCLLHGQAGTGKAMACDVVGFELGRPLLVVSAATLLSRHSYRD-NAIGKLFKDAKKAGAVLCIRNFCRLF-----DALATAGPTAIDVGLLMHHITQYSVTGVIVLTAASLDGIEQSVLGHVRHTIELPMPGQQERQALWRGCTPSAVPLAADVDFKALALKFRLSGGQISAAVFEA 519
G L HG+ GTGK +A + VGF++GRPL+VV+ A L+ ++ I ++F++AK AVL LF D +T+ +++VG+L+HH+ + G+ V ++ + + +E P P R LWR P PL ADVDF L +F L+GG I +AVF A
Sbjct: 579 GIAALFHGEPGTGKTLAAEAVGFDIGRPLMVVNCAQLMDKYVGESAKNIERVFEEAKAQEAVLVFDEAEGLFAERTSDGGSTSRHDSMNVGVLLHHMETFG--GMCVAITNRYAQVDTAFHRRFKFILEFPRPDASARAKLWRLLLPKQAPLQADVDFSLLGEQFDLTGGAIKSAVFRA 755
BLAST of mRNA_M-pyrifera_M_contig119799.4068.1 vs. uniprot
Match: A0A7S0JJP7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JJP7_9EUKA) HSP 1 Score: 100 bits (249), Expect = 2.420e-21 Identity = 62/179 (34.64%), Postives = 94/179 (52.51%), Query Frame = 1
Query: 1 GCVCLLHGQAGTGKAMACDVVGFELGRPLLVVSAATLLSRHSYRD-NAIGKLFKDAKKAGAVLCIRNFCRLFDALATAGPT-----AIDVGLLMHHITQYSVTGVIVLTAASLDGIEQSVLGHVRHTIELPMPGQQERQALWRGCTPSAVPLAADVDFKALALKFRLSGGQISAAVFEA 519
G L HG+ GTGK +A + VGF++GRPL+VV+ A L+ ++ I ++F++AK AVL LF + G + +++VG+L+HH+ + G++V I+ + + +E P P R LWR P PL DVDF L +F L+GG I +AVF A
Sbjct: 866 GIAALFHGEPGTGKTLAAEAVGFDIGRPLMVVNCAQLMDKYVGESAKNIERVFEEAKAQDAVLVFDESEGLFAERSNEGGSTSRHDSMNVGVLLHHMETFG--GMVVAITNRYAQIDTAFHRRFKFILEFPRPDAAARSQLWRLLLPKQTPLKEDVDFGVLGEQFDLTGGAIKSAVFRA 1042
BLAST of mRNA_M-pyrifera_M_contig119799.4068.1 vs. uniprot
Match: A0A7S4BHD7_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BHD7_CHRCT) HSP 1 Score: 97.4 bits (241), Expect = 2.760e-20 Identity = 60/179 (33.52%), Postives = 92/179 (51.40%), Query Frame = 1
Query: 1 GCVCLLHGQAGTGKAMACDVVGFELGRPLLVVSAATLLSRHSYRD-NAIGKLFKDAKKAGAVLCIRNFCRLFDALATAGPT-----AIDVGLLMHHITQYSVTGVIVLTAASLDGIEQSVLGHVRHTIELPMPGQQERQALWRGCTPSAVPLAADVDFKALALKFRLSGGQISAAVFEA 519
G L HG+ GTGK MA + VGF++G+PL+VV+ A L+ ++ I ++F +A+ AVL LF + G + +++VG+L+HH+ + G++V ++ + + +E P P R LWR P P DVDF L KF L+GG I +AVF A
Sbjct: 615 GIAALFHGEPGTGKTMAAEAVGFDIGKPLMVVNCAQLMDKYVGESAKNIERVFDEAQAQDAVLVFDEAEGLFAERSNEGGSTSRHDSMNVGVLLHHMETFG--GIVVAITNRYAQVDTAFHRRFKFILEFPRPDAAARAKLWRLLIPKEAPTKDDVDFGVLGEKFDLTGGAIKSAVFRA 791
BLAST of mRNA_M-pyrifera_M_contig119799.4068.1 vs. uniprot
Match: A0A1X7UH62_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UH62_AMPQE) HSP 1 Score: 97.1 bits (240), Expect = 3.880e-20 Identity = 60/184 (32.61%), Postives = 99/184 (53.80%), Query Frame = 1
Query: 1 GCVCLLHGQAGTGKAMACDVVGFELGRPLLVVSAATLLSRHSYRDNA-IGKLFKDAKKAGAVLCIRNFCRLFD-----ALATAGPTAIDVGLLMHHITQYSVTGVIVLTAASLDGIEQSVLGHVRHTIELPMPGQQERQALWRGCTPSAVPLAADVDFKALALKFRLSGGQISAAVFEACSAAA 534
G L HG GTGK++A + VG+E+G+PL VV+ LLS+ I +F++A+ A+L LF + +T +DVG+L++HI ++ G+I+LT +D ++++ ++ + P + R LW+ P P+ +DF LA F +SGGQI +A+F A + AA
Sbjct: 841 GLTVLFHGAPGTGKSLAAEAVGYEVGKPLKVVNCGELLSKWVGESTKNIDAIFEEARSTDAILVFDECEGLFGQRTDMSTSTDRYANVDVGVLLYHIERFP--GIIILTTNLMDNMDKAFFRRLKFVLHFDCPSVKLRLQLWKLLIPEETPMEEGIDFNKLA-GFDMSGGQIKSAIFRAAARAA 1021
BLAST of mRNA_M-pyrifera_M_contig119799.4068.1 vs. uniprot
Match: UPI001670D0E7 (Uncharacterized protein n=2 Tax=Actinoplanes ianthinogenes TaxID=122358 RepID=UPI001670D0E7) HSP 1 Score: 87.8 bits (216), Expect = 6.080e-17 Identity = 62/185 (33.51%), Postives = 91/185 (49.19%), Query Frame = 1
Query: 1 GCVCLLHGQAGTGKAMACDVVGFELGRPLLVVSAATLLSRH-SYRDNAIGKLFKDAKKAGAVLCIRNFCRLFDALATAGPTA-----IDVGLLMHHITQYSVTGVIVLTAASLDGIEQSVLGHVRHTIELPMPGQQERQALWRGCTPSAVPLAADVDFKALALKFRLSGGQISAAVFEA-CSAAA 534
G L HG +GTGK A V+ ELG L V +T++S++ + + ++F A+ A A++ LF + I+V L+ + Y GV +L ++ + + H +E P PG + R+ LWR P PLAADVDF ALA + L+GG I +AV A C AAA
Sbjct: 566 GVTALFHGPSGTGKTFAARVLATELGLDLYRVDLSTVVSKYIGETERNLARIFAAARAAHAMVLFDEADALFGRRSAVQDARDRYANIEVAYLLQELEGYD--GVALLATNLSGNLDDAFARRLGHAVEFPFPGPELREVLWRQAVPGRAPLAADVDFGALA-RLELAGGHIQSAVLAAACRAAA 747 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119799.4068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119799.4068.1 >prot_M-pyrifera_M_contig119799.4068.1 ID=prot_M-pyrifera_M_contig119799.4068.1|Name=mRNA_M-pyrifera_M_contig119799.4068.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp GCVCLLHGQAGTGKAMACDVVGFELGRPLLVVSAATLLSRHSYRDNAIGKback to top mRNA from alignment at M-pyrifera_M_contig119799:6..539+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119799.4068.1 ID=mRNA_M-pyrifera_M_contig119799.4068.1|Name=mRNA_M-pyrifera_M_contig119799.4068.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig119799:6..539+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119799:6..539+ >mRNA_M-pyrifera_M_contig119799.4068.1 ID=mRNA_M-pyrifera_M_contig119799.4068.1|Name=mRNA_M-pyrifera_M_contig119799.4068.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig119799:6..539+ (Macrocystis pyrifera P11B4 male)back to top |