mRNA_M-pyrifera_M_contig119192.3954.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119192.3954.1 vs. uniprot
Match: A0A2E7KLH5_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KLH5_9PLAN) HSP 1 Score: 297 bits (760), Expect = 7.180e-102 Identity = 143/154 (92.86%), Postives = 143/154 (92.86%), Query Frame = 1
Query: 1 MNFLIYRYQCGSCQCWFEHYEMTPVVYGEFLMRSETRRAERYLNGLTDPVYEEVAQLLRLETSVGSRSDREQSDLLQTIFGVACDPAEDGGLFQMNLLPRCPDCG--------ATEPPRIVDLEIPHVTHHRWNALNQAEKLLVLENELKQRGF 438
MNFLIYRYQCGSCQCWFEHYEMTPVVYGEFLMRSETRRAERYLNGLTDPVYEEVAQLLRLETSVGSRSDREQSDLLQTIFGVACDP DGGLFQMNLLPRCPDCG A EPPRIVDLEIPHVTHHRWNALNQAEKLLVLENELKQRGF
Sbjct: 1 MNFLIYRYQCGSCQCWFEHYEMTPVVYGEFLMRSETRRAERYLNGLTDPVYEEVAQLLRLETSVGSRSDREQSDLLQTIFGVACDPDVDGGLFQMNLLPRCPDCGGEEISQYVAAEPPRIVDLEIPHVTHHRWNALNQAEKLLVLENELKQRGF 154
BLAST of mRNA_M-pyrifera_M_contig119192.3954.1 vs. uniprot
Match: A0A1N7JW77_9GAMM (Uncharacterized protein n=1 Tax=Oleibacter marinus TaxID=484498 RepID=A0A1N7JW77_9GAMM) HSP 1 Score: 93.6 bits (231), Expect = 1.580e-21 Identity = 45/154 (29.22%), Postives = 80/154 (51.95%), Query Frame = 1
Query: 1 MNFLIYRYQCGSCQCWFEHYEMTPVVYGEFLMRSETRRAERYLNGLTDPVYEEVAQLLRLETSVGSRSDREQSDLLQTIFGVACDPAEDGGLFQMNLLPRCPDCGA--------TEPPRIVDLEIPHVTHHRWNALNQAEKLLVLENELKQRGF 438
M + Y C C F+ +T YGEF++RS T YLN L D Y+EV ++++ V + D L + ACDP E+G L+++ P CP+CG+ T P +D+++P+++H +WN +++EK ++ +++ +
Sbjct: 1 MKLYLLEYTCSECSQKFKSPTLTGSPYGEFILRSSTPGKIAYLNALIDKTYDEVDEIMKSSGRVYNIYD-----LYKVYSYSACDPDENGNLYEIGKNPTCPNCGSLDVENWIGTYPEEFIDIDVPYLSHEKWNIKDKSEKTSIIIDKMNKMNL 149
BLAST of mRNA_M-pyrifera_M_contig119192.3954.1 vs. uniprot
Match: UPI0011B4839F (hypothetical protein n=1 Tax=Blastopirellula retiformator TaxID=2527970 RepID=UPI0011B4839F) HSP 1 Score: 87.8 bits (216), Expect = 5.840e-20 Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 199 RSDREQSDLLQTIFGVACDPAEDGGLFQMNLLPRCPDCGA--------TEPPRIVDLEIPHVTHHRWNALNQAEKLLVLENELKQ 429
RSD E+SDLLQ +FGVACDPA DG Q+ +PRCP C A TEPPR+V+++I HVTH W L EK+ V+ + +++
Sbjct: 3 RSDLERSDLLQLVFGVACDPAADGTRLQIGRMPRCPWCDAAKIENWEATEPPRMVEVDIRHVTHVAWRRLTDLEKVKVVADAVEE 87
BLAST of mRNA_M-pyrifera_M_contig119192.3954.1 vs. uniprot
Match: A0A8J3VI13_9ACTN (Uncharacterized protein n=1 Tax=Rhizocola hellebori TaxID=1392758 RepID=A0A8J3VI13_9ACTN) HSP 1 Score: 69.3 bits (168), Expect = 4.750e-12 Identity = 39/154 (25.32%), Postives = 73/154 (47.40%), Query Frame = 1
Query: 1 MNFLIYRYQCGSCQCWFEHYEMTPVV---YGEFLMRSETRRAERYLNGLTDPVYEEVAQLLRLETSVGSRSDREQSDLLQTIFGVACDPAEDGGLFQMNLLP---RCPDCG-----ATEPPRIVDLEIPHVTHHRWNALNQAEKLLVLENELKQ 429
M F + Y+C H P + +G FL RS Y++ ++D + ++ +LR + + E+ ++Q +F + CD G + +N P C DC AT+PP VD+++P V+H RW++++ ++ +E L +
Sbjct: 1 MRFQLATYRCDPNG----HLFRAPTILGGHGVFLARSSGEGDLAYVDAVSDDAFGDLRSILRGIPTFMQLHELERGKVVQDLFSITCDYDSQGAPYVLNRDPCCIHCSDCNVRFIEATDPPEFVDIDVPEVSHGRWDSMSVTDRRTAIEQALNE 150
BLAST of mRNA_M-pyrifera_M_contig119192.3954.1 vs. uniprot
Match: A0A1Q3SPD2_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium 39-13 TaxID=1895767 RepID=A0A1Q3SPD2_9GAMM) HSP 1 Score: 67.4 bits (163), Expect = 2.440e-11 Identity = 38/132 (28.79%), Postives = 71/132 (53.79%), Query Frame = 1
Query: 49 FEHYEMTPVVYGEFLMRSETRRAER-YLNGLTDPVYEEVAQLLRLETSVGSRSDREQSDLLQTIFGVACDPAEDGG-LFQMNLLPRCPDCGATE--------PPRIVDLEIPHVTHHRWNALNQAEKLLVLE 414
FE E+ YG L+R+E + Y+N D + E+ +L+ + V + + + +D++Q++F +ACD DGG + + RCP CG P + V++++ VTH+ W +L++AEK +++
Sbjct: 16 FEVPELDEFQYGTLLLRNELDEIQCVYVN---DKAFSEIDKLVSGHSLVSNYEEGDLTDIVQSVFSIACDENVDGGGKYNIRTNQRCPKCGTRNMDDWGQIIPLKPVEVDVKEVTHNHWFSLSEAEKKSLVD 144
BLAST of mRNA_M-pyrifera_M_contig119192.3954.1 vs. uniprot
Match: A0A0Q9YYD7_9COXI (Uncharacterized protein n=1 Tax=Candidatus Berkiella aquae TaxID=295108 RepID=A0A0Q9YYD7_9COXI) HSP 1 Score: 61.2 bits (147), Expect = 5.360e-9 Identity = 37/149 (24.83%), Postives = 74/149 (49.66%), Query Frame = 1
Query: 1 MNFLIYRYQCGSCQCWFEHYEMTPVVYGEFLMRSETRRAERYLNGLTDPVYEEVAQLLRLETSVGSRSDREQSDLLQTIFGVACDPAEDGGLFQMNLLPRCPDCGATE--------PPRIVDLEIPHVTHHRWNALNQAEKLLVLENEL 423
M +++Y C + FE ++ YG L+R+E + G + ++E+ +L+ V + + +D++Q++F VACD GG F++ CP C P + V++++ VTH+ W +L++AEK +++ +
Sbjct: 1 MILFLWKYTCINGHE-FEVPQLDEFEYGTLLLRNELNEIQYVCLG--NKAFDEIDRLVSGHPLVSHFEEGDLTDVVQSVFSVACDINIHGGPFKIARRQSCPQCSTRMMDDWDQIIPFKPVEVDVKEVTHNHWFSLSEAEKKSLVDTAI 146 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119192.3954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119192.3954.1 >prot_M-pyrifera_M_contig119192.3954.1 ID=prot_M-pyrifera_M_contig119192.3954.1|Name=mRNA_M-pyrifera_M_contig119192.3954.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=147bp MNFLIYRYQCGSCQCWFEHYEMTPVVYGEFLMRSETRRAERYLNGLTDPVback to top mRNA from alignment at M-pyrifera_M_contig119192:33..497+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119192.3954.1 ID=mRNA_M-pyrifera_M_contig119192.3954.1|Name=mRNA_M-pyrifera_M_contig119192.3954.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=465bp|location=Sequence derived from alignment at M-pyrifera_M_contig119192:33..497+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119192:33..497+ >mRNA_M-pyrifera_M_contig119192.3954.1 ID=mRNA_M-pyrifera_M_contig119192.3954.1|Name=mRNA_M-pyrifera_M_contig119192.3954.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=882bp|location=Sequence derived from alignment at M-pyrifera_M_contig119192:33..497+ (Macrocystis pyrifera P11B4 male)back to top |