mRNA_M-pyrifera_M_contig119134.3935.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119134.3935.1 vs. uniprot
Match: A0A6I6AC59_9PLAN (PQQ-binding-like beta-propeller repeat protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AC59_9PLAN) HSP 1 Score: 360 bits (925), Expect = 1.310e-118 Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 1
Query: 1 GEMLWNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLNSQDGKLNWVVTYPSADDVSRRELSDHMMSGLVPCLYDQGILFVAPQDTKTLMAFDASSGLLLWEREWPEQIRNLLGVTARTLVVSGNQLYGIDRASGALRWKAGYLDPEGFGYGRGLLAGENVYWPLRDELLV 543
GEMLWNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLN+QDGKLNWVVTYPSADDVSRRELSDHM SGLVPCLYDQGILFVAPQDTKTLMAFDASSGLLLWEREWPEQIRNLLGVTARTLVVSGNQLYGIDRASGALRWKAGYLDPEGFGYGRGLL+ ENVYWPLRDELLV
Sbjct: 477 GEMLWNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLNTQDGKLNWVVTYPSADDVSRRELSDHMASGLVPCLYDQGILFVAPQDTKTLMAFDASSGLLLWEREWPEQIRNLLGVTARTLVVSGNQLYGIDRASGALRWKAGYLDPEGFGYGRGLLSVENVYWPLRDELLV 657
BLAST of mRNA_M-pyrifera_M_contig119134.3935.1 vs. uniprot
Match: A0A518A0I6_9PLAN (Outer membrane biogenesis protein BamB n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A0I6_9PLAN) HSP 1 Score: 337 bits (864), Expect = 1.700e-109 Identity = 161/181 (88.95%), Postives = 174/181 (96.13%), Query Frame = 1
Query: 1 GEMLWNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLNSQDGKLNWVVTYPSADDVSRRELSDHMMSGLVPCLYDQGILFVAPQDTKTLMAFDASSGLLLWEREWPEQIRNLLGVTARTLVVSGNQLYGIDRASGALRWKAGYLDPEGFGYGRGLLAGENVYWPLRDELLV 543
GEMLWN+KVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASL+S DGK+NWVVTYPS +DVSRR+LSDHM +GLVPCLYDQGILFVAPQDT+ LMAFDA+SGLLLWER+WPEQIRNLLGVTA TLVVSGNQL+GIDR +GALRWK GYLDPEGFGYGRGLLAG+NVYWPLR+ELLV
Sbjct: 476 GEMLWNRKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLDSLDGKINWVVTYPSEEDVSRRDLSDHMTTGLVPCLYDQGILFVAPQDTRRLMAFDATSGLLLWERDWPEQIRNLLGVTATTLVVSGNQLFGIDRTNGALRWKTGYLDPEGFGYGRGLLAGDNVYWPLREELLV 656
BLAST of mRNA_M-pyrifera_M_contig119134.3935.1 vs. uniprot
Match: UPI001E51619D (PQQ-like beta-propeller repeat protein n=1 Tax=Gimesia maris TaxID=122 RepID=UPI001E51619D) HSP 1 Score: 294 bits (753), Expect = 1.390e-98 Identity = 137/181 (75.69%), Postives = 159/181 (87.85%), Query Frame = 1
Query: 1 GEMLWNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLNSQDGKLNWVVTYPSADDVSRRELSDHMMSGLVPCLYDQGILFVAPQDTKTLMAFDASSGLLLWEREWPEQIRNLLGVTARTLVVSGNQLYGIDRASGALRWKAGYLDPEGFGYGRGLLAGENVYWPLRDELLV 543
GEM+WNQKVCLALR+IEEGVNYI+HLLLTL E LYLSTDMGAIASL++ DGKLNW+VTY S D R E+S+HM +GLVPCLYD+GILF APQD+ LMAFDA SGLLLW+REWPEQIRNLLGVT TLVVSGN+L+G+DRA+G + WK GY DPEGFGYGRG+LAG+ +YWPLR+E+LV
Sbjct: 20 GEMIWNQKVCLALRSIEEGVNYISHLLLTLGEDHLYLSTDMGAIASLDTVDGKLNWLVTYSSEDKTDRDEMSNHMKTGLVPCLYDRGILFAAPQDSSQLMAFDAESGLLLWQREWPEQIRNLLGVTPSTLVVSGNRLFGLDRATGRINWKTGYHDPEGFGYGRGILAGQYIYWPLREEILV 200
BLAST of mRNA_M-pyrifera_M_contig119134.3935.1 vs. uniprot
Match: A6CFB6_9PLAN (Uncharacterized protein n=7 Tax=Planctomycetaceae TaxID=126 RepID=A6CFB6_9PLAN) HSP 1 Score: 290 bits (742), Expect = 3.230e-97 Identity = 135/179 (75.42%), Postives = 157/179 (87.71%), Query Frame = 1
Query: 7 MLWNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLNSQDGKLNWVVTYPSADDVSRRELSDHMMSGLVPCLYDQGILFVAPQDTKTLMAFDASSGLLLWEREWPEQIRNLLGVTARTLVVSGNQLYGIDRASGALRWKAGYLDPEGFGYGRGLLAGENVYWPLRDELLV 543
M+WNQKVCLALR+IEEGVNYI+HLLLTL E LYLSTDMGAIASL++ DGKLNW+VTY S D R E+S+HM +GLVPCLYD+GILF APQD+ LMAFDA SGLLLW+REWPEQIRNLLGVT TLVVSGN+L+G+DRA+G + WK GY DPEGFGYGRG+LAG+ +YWPLR+E+LV
Sbjct: 1 MIWNQKVCLALRSIEEGVNYISHLLLTLGEDHLYLSTDMGAIASLDTVDGKLNWLVTYSSEDKTDRDEMSNHMKTGLVPCLYDRGILFAAPQDSSQLMAFDAESGLLLWQREWPEQIRNLLGVTPSTLVVSGNRLFGLDRATGRINWKTGYHDPEGFGYGRGILAGQYIYWPLREEILV 179
BLAST of mRNA_M-pyrifera_M_contig119134.3935.1 vs. uniprot
Match: A0A355GFP1_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355GFP1_9PLAN) HSP 1 Score: 293 bits (749), Expect = 2.050e-92 Identity = 136/181 (75.14%), Postives = 158/181 (87.29%), Query Frame = 1
Query: 1 GEMLWNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLNSQDGKLNWVVTYPSADDVSRRELSDHMMSGLVPCLYDQGILFVAPQDTKTLMAFDASSGLLLWEREWPEQIRNLLGVTARTLVVSGNQLYGIDRASGALRWKAGYLDPEGFGYGRGLLAGENVYWPLRDELLV 543
GEM+WNQKVCLALR+IEEGVNYI+HLLLTL E QLYLSTDMGAIASLN+ +GKLNW+VTYPS D + ELS+HM +GLVPCLYD+GILF APQD+ LMAFDA SGLLLW+R WPEQIRNLLG T TLVVSG++L+G+DRA+G + WK GY DPEGFGYGRG+LAG+ YWPLR+E+LV
Sbjct: 476 GEMIWNQKVCLALRSIEEGVNYISHLLLTLGEDQLYLSTDMGAIASLNTVNGKLNWLVTYPSQDKTDKEELSNHMKTGLVPCLYDRGILFAAPQDSSQLMAFDAESGLLLWQRPWPEQIRNLLGATQSTLVVSGDRLFGLDRATGRINWKTGYHDPEGFGYGRGILAGDYTYWPLREEILV 656
BLAST of mRNA_M-pyrifera_M_contig119134.3935.1 vs. uniprot
Match: A0A517WTF9_9PLAN (Outer membrane biogenesis protein BamB n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WTF9_9PLAN) HSP 1 Score: 289 bits (739), Expect = 6.230e-91 Identity = 133/181 (73.48%), Postives = 160/181 (88.40%), Query Frame = 1
Query: 1 GEMLWNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLNSQDGKLNWVVTYPSADDVSRRELSDHMMSGLVPCLYDQGILFVAPQDTKTLMAFDASSGLLLWEREWPEQIRNLLGVTARTLVVSGNQLYGIDRASGALRWKAGYLDPEGFGYGRGLLAGENVYWPLRDELLV 543
GE++WNQKVC+ALRNIEEGVNYI+HLLLTLAEGQLYLSTDMGAIASL+S DGK+NWVVTYP+ ++ + ELSDHM +G+VPCLYD+GIL+ APQD+ LMAFDA SGLLLWERE+PE IR+LLGV TL VSGNQL+G+++ +G + WK GY DPEGFGYGRG+LAG+ VYWPLR+E+LV
Sbjct: 476 GELIWNQKVCMALRNIEEGVNYISHLLLTLAEGQLYLSTDMGAIASLDSDDGKINWVVTYPTQEESTHTELSDHMKTGIVPCLYDRGILYAAPQDSSLLMAFDADSGLLLWEREFPEPIRDLLGVNQSTLYVSGNQLFGLNKRTGTVSWKVGYQDPEGFGYGRGILAGKYVYWPLREEILV 656
BLAST of mRNA_M-pyrifera_M_contig119134.3935.1 vs. uniprot
Match: A0A518I6D9_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I6D9_9PLAN) HSP 1 Score: 288 bits (736), Expect = 1.850e-90 Identity = 134/181 (74.03%), Postives = 158/181 (87.29%), Query Frame = 1
Query: 1 GEMLWNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLNSQDGKLNWVVTYPSADDVSRRELSDHMMSGLVPCLYDQGILFVAPQDTKTLMAFDASSGLLLWEREWPEQIRNLLGVTARTLVVSGNQLYGIDRASGALRWKAGYLDPEGFGYGRGLLAGENVYWPLRDELLV 543
GE++WNQKVCLALRNIEEG NYITHLLLTLAEGQL+LSTDMGAIASL+S+DGK+NW+VTYP D VS+ LS+HM +G+VPCLYD+GILF APQD+ LMAFDA +GLLLW R P+Q+RNLLGV TL+VSGNQL+GIDR +GA+RWK G DPEGFG+GRG+L GE VYWPLR+E+LV
Sbjct: 477 GELIWNQKVCLALRNIEEGTNYITHLLLTLAEGQLFLSTDMGAIASLSSRDGKINWLVTYPGEDRVSKHALSNHMETGIVPCLYDRGILFAAPQDSSELMAFDADTGLLLWRRALPQQVRNLLGVNHSTLIVSGNQLFGIDRTTGAVRWKVGSQDPEGFGFGRGVLVGEFVYWPLREEILV 657
BLAST of mRNA_M-pyrifera_M_contig119134.3935.1 vs. uniprot
Match: A0A517R9C0_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517R9C0_9PLAN) HSP 1 Score: 286 bits (732), Expect = 7.240e-90 Identity = 133/181 (73.48%), Postives = 158/181 (87.29%), Query Frame = 1
Query: 1 GEMLWNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLNSQDGKLNWVVTYPSADDVSRRELSDHMMSGLVPCLYDQGILFVAPQDTKTLMAFDASSGLLLWEREWPEQIRNLLGVTARTLVVSGNQLYGIDRASGALRWKAGYLDPEGFGYGRGLLAGENVYWPLRDELLV 543
GE++WNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASL+S+DGK+NW+VTY S + V++ ELSDHM +GLVPC+YD+GILF APQD+ LMA DA +GLLLW RE P QIRNLLGV TL+ SGNQL+G+DR +G ++WK G DPEG+GYGRG+LAG+ VYWPLR+E+LV
Sbjct: 477 GELIWNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLDSRDGKINWLVTYASQEGVNKHELSDHMETGLVPCVYDRGILFAAPQDSTELMALDADTGLLLWRRELPHQIRNLLGVNGSTLIASGNQLWGLDRVTGVVKWKLGSQDPEGYGYGRGVLAGDYVYWPLREEILV 657
BLAST of mRNA_M-pyrifera_M_contig119134.3935.1 vs. uniprot
Match: A0A836VWW9_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836VWW9_9PLAN) HSP 1 Score: 167 bits (422), Expect = 1.420e-48 Identity = 82/181 (45.30%), Postives = 115/181 (63.54%), Query Frame = 1
Query: 1 GEMLWNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLNSQDGKLNWVVTYPSADDVSRRELSDHMMSGLVPCLYDQGILFVAPQDTKTLMAFDASSGLLLWEREWPEQIRNLLGVTARTLVVSGNQLYGIDRASGALRWKAGYLDPEGFGYGRGLLAGENVYWPLRDELLV 543
G+ +W +++C LR I + N + H LLTL ++Y ST++GAIA+L +DG++ WVVTY R + +GL PC+Y G++ APQDT ++ DA SG++L E + PE+++ LLGVT TLV SG L+GID +G LRW G PE GYGRG +AG YWP R+E+LV
Sbjct: 17 GKPVWRRRICSPLRAIRDRWNVLGHGLLTLGPERIYYSTNLGAIAALEREDGRVAWVVTYTPDVRGDRERIRRLETTGLTPCVYHAGVVCAAPQDTDSIFLLDADSGIVLHELKLPERVQFLLGVTGGTLVASGRSLWGIDIVTGRLRWHVGGERPEDSGYGRGTIAGHRAYWPTREEILV 197
BLAST of mRNA_M-pyrifera_M_contig119134.3935.1 vs. uniprot
Match: A0A5C9BRA1_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A5C9BRA1_9BACT) HSP 1 Score: 160 bits (405), Expect = 1.990e-44 Identity = 78/182 (42.86%), Postives = 120/182 (65.93%), Query Frame = 1
Query: 7 MLWNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLNSQDGKLNWVVTYPSADDVSRRELSDHMMSGLVPCLYDQGILFVAPQDTKTLMAFDASSGLLLWEREWPEQIRNLLGVTARTLVVSGNQLYGIDRASGALRW---KAGYLDPEGFGYGRGLLAGENVYWPLRDELLV 543
+LWN+K+ + + + EE N +HL + +AE +++STD GAIA+L++ DG + WV TY S ++ R G P ++ +G+L+VAP D+ L+A A SGLLLW+REWP+ ++++LGV+ TL+V G L+G+ A+G W + G DPEG +GRG+L G+ V+WP RDEL+V
Sbjct: 173 LLWNRKIGITVTSTEEAANSTSHLQVVVAEDSVFVSTDAGAIAALDAHDGAIRWVRTYASEAVLTAR---GGRRDGHAPPIFYEGVLYVAPLDSDLLLAIHAESGLLLWQREWPDLLQSVLGVSHNTLIVQGRSLWGVALATGEPTWPHRRIGSDDPEGISFGRGILIGDEVWWPNRDELIV 351 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119134.3935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119134.3935.1 >prot_M-pyrifera_M_contig119134.3935.1 ID=prot_M-pyrifera_M_contig119134.3935.1|Name=mRNA_M-pyrifera_M_contig119134.3935.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp MLWNQKVCLALRNIEEGVNYITHLLLTLAEGQLYLSTDMGAIASLNSQDGback to top mRNA from alignment at M-pyrifera_M_contig119134:2..544+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119134.3935.1 ID=mRNA_M-pyrifera_M_contig119134.3935.1|Name=mRNA_M-pyrifera_M_contig119134.3935.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=543bp|location=Sequence derived from alignment at M-pyrifera_M_contig119134:2..544+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119134:2..544+ >mRNA_M-pyrifera_M_contig119134.3935.1 ID=mRNA_M-pyrifera_M_contig119134.3935.1|Name=mRNA_M-pyrifera_M_contig119134.3935.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig119134:2..544+ (Macrocystis pyrifera P11B4 male)back to top |