mRNA_M-pyrifera_M_contig119127.3933.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119127.3933.1 vs. uniprot
Match: A0A2D9CEW7_9BACT (PHB domain-containing protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9CEW7_9BACT) HSP 1 Score: 192 bits (489), Expect = 2.430e-54 Identity = 105/181 (58.01%), Postives = 136/181 (75.14%), Query Frame = 1
Query: 1 ERIEALEAEQLAVSGASAASAFEGISDDLRVGARRLAFIQKWIVPAAAVLVALINIYFGIRGIRVWQSNRADEIFNTPSLFGWGLSIGVAFGVIGFIFARFTSGMGKEKAWGHLRSGAAQAVAASLVGVLIAVGAFVELALGKNTVTMYTPLIVSIAMIVLGSEVVMNLVLYMYRPRKPGE 543
ERIEA+EAEQLAVSGASAASAFE D++R+ ARRLA I KWIVPA A+L+A INI+ G R +QS ++ N+ S GW L+IG+A V+GF+FARF SGM K AW +LR+GA +VAA+LVG+++AVG F+ELAL + V +P I+SI M+ G E+V+NL+L +YRPRKPGE
Sbjct: 98 ERIEAMEAEQLAVSGASAASAFENTGDEMRLAARRLALIYKWIVPAVAILLAAINIWVGFSRFRFYQS--IEDYSNSSSHAGWALAIGIALAVVGFVFARFVSGMAKVNAWANLRAGATTSVAAALVGLVLAVGGFLELALSMDQVISISPYIISIGMVAYGVEIVLNLLLDVYRPRKPGE 276
BLAST of mRNA_M-pyrifera_M_contig119127.3933.1 vs. uniprot
Match: A0A812XYP5_9DINO (HflC protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XYP5_9DINO) HSP 1 Score: 195 bits (495), Expect = 2.490e-54 Identity = 112/183 (61.20%), Postives = 138/183 (75.41%), Query Frame = 1
Query: 1 ERIEALEAEQLAVSGASAASAFEGISDDLRVGARRLAFIQKWIVPAAAVLVALINIYFGIRGIRVWQSNRADE--IFNTPSLFGWGLSIGVAFGVIGFIFARFTSGMGKEKAWGHLRSGAAQAVAASLVGVLIAVGAFVELALGKNTVTMYTPLIVSIAMIVLGSEVVMNLVLYMYRPRKPGE 543
ERIE++EAEQ A SG ++ASAF DDLRV ARRL FIQKW+VPAA V+ A INI GI +R W + +DE I+NT + G L+IG+A GV+GFIFARF SGMGK W +LR+GAAQ+VA S+VGVL+AV AF+EL+LG+ TP+I+ I MIVLG EVV+NLVL +YRPRKPGE
Sbjct: 89 ERIESMEAEQFASSGGASASAFSDAGDDLRVAARRLVFIQKWVVPAAGVVFAAINILAGISRLRSWNAYSSDETFIYNTH-IVGAMLAIGLAIGVVGFIFARFVSGMGKINVWSNLRAGAAQSVAISMVGVLLAVAAFLELSLGQMGFKALTPMIIPIGMIVLGCEVVLNLVLDVYRPRKPGE 270
BLAST of mRNA_M-pyrifera_M_contig119127.3933.1 vs. uniprot
Match: A0A3M2CNL4_9BACT (PHB domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CNL4_9BACT) HSP 1 Score: 165 bits (417), Expect = 4.310e-44 Identity = 94/181 (51.93%), Postives = 126/181 (69.61%), Query Frame = 1
Query: 1 ERIEALEAEQLAVSGASAASAFEGISDDLRVGARRLAFIQKWIVPAAAVLVALINIYFGIRGIRVWQSNRADEIFNTPSLFGWGLSIGVAFGVIGFIFARFTSGMGKEKAWGHLRSGAAQAVAASLVGVLIAVGAFVELALGKNTVTMYTPLIVSIAMIVLGSEVVMNLVLYMYRPRKPGE 543
ER+EALEAEQLA S ++A+SAFE +DDLRV ARRLA IQKW++P A+++A IN+ G +R W+ + D + P GW L+IG ++ F+FARF SGMG K W +LR+GAA AVAASLVG+LI AFV++AL + + + P I+ I MIVLG E V++L+L +YRPR E
Sbjct: 136 ERLEALEAEQLA-STSAASSAFEATTDDLRVAARRLATIQKWVLPFGAIVIASINLVGGYLSLRAWRGVQ-DPVAELPDPTGWALAIGFGVAIVMFVFARFASGMGTLKPWANLRAGAAAAVAASLVGLLIGAAAFVQMALSQTWMALAIPYIIPILMIVLGVETVLHLILDLYRPRSASE 314
BLAST of mRNA_M-pyrifera_M_contig119127.3933.1 vs. uniprot
Match: UPI001E5CCCDB (SPFH domain-containing protein n=1 Tax=unclassified Nostoc TaxID=2593658 RepID=UPI001E5CCCDB) HSP 1 Score: 132 bits (332), Expect = 1.500e-32 Identity = 81/186 (43.55%), Postives = 116/186 (62.37%), Query Frame = 1
Query: 1 ERIEALEAEQLAVSGASAASAFEGISDDLRVGARRLAFIQKWIVPAAAVLVALINI---YFGIRGI--RVWQSNRADEIFNTPSLFGWGLSIGVAFGVIGFIFARFTSGMGKEKAWGHLRSGAAQAVAASLVGVLIAVGAFVELALGKNTVTMYTPLIVSIAMIVLGSEVVMNLVLYMYRPRKPGE 543
ERIEALE EQL A S F ++DLRV ARRLA++ ++VP ++L+A + I Y+ I R+ ++F P GW ++IG+ G++GFIFARF SGM K+K W +LR GA AV ASL+G+ IA+ FV++A ++ Y +I+ LG E+V++L+L +YRPRKPGE
Sbjct: 68 ERIEALEQEQL--DAAKEGSVFSASTEDLRVNARRLAWMHSFLVPGVSILLAGLLIALAYWRITDAMGRIGYDKAGVDLFTKPPHRGWAIAIGLGLGIVGFIFARFVSGMSKQKMWANLRGGAGYAVLASLIGIAIAIAHFVDMA-SRDDALRYIQIIIPALAGFLGVEIVVSLLLNLYRPRKPGE 250
BLAST of mRNA_M-pyrifera_M_contig119127.3933.1 vs. uniprot
Match: A0A6I7PLA7_9BACT (PHB domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6I7PLA7_9BACT) HSP 1 Score: 131 bits (330), Expect = 2.670e-32 Identity = 76/181 (41.99%), Postives = 116/181 (64.09%), Query Frame = 1
Query: 1 ERIEALEAEQLAVSGASAASAFEGISDDLRVGARRLAFIQKWIVPAAAVLVALINIYFGIRGIRVWQSNRADEIFNTPSLFGWGLSIGVAFGVIGFIFARFTSGMGKEKAWGHLRSGAAQAVAASLVGVLIAVGAFVELALGKNTVTMYTPLIVSIAMIVLGSEVVMNLVLYMYRPRKPGE 543
ER+EA+E E S A ASAFE +D+LRV ARRLA++ + ++P +V++ + I GI + A + F P L GW +++G+ VIGFIFARF +GM +++ W +LR+GAA +V A+LVG+ IA+ FV LG + + Y + + + M+ LG+E+ +N VL +YRPR+ GE
Sbjct: 68 ERLEAIETEAYESSAAGQASAFEAAADELRVAARRLAWMHRILLPILSVVIGALLIGVGIARFIPGRDVLAIDGFRAPGLVGWAIAVGLGVSVIGFIFARFVAGMAQQREWINLRAGAAYSVGAALVGLAIAIAHFVSF-LGNDLLLRYLHVALPVYMMTLGAEIFVNFVLNVYRPRRAGE 247
BLAST of mRNA_M-pyrifera_M_contig119127.3933.1 vs. uniprot
Match: A0A651FR46_9BACT (PHB domain-containing protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A651FR46_9BACT) HSP 1 Score: 128 bits (321), Expect = 4.710e-31 Identity = 77/188 (40.96%), Postives = 115/188 (61.17%), Query Frame = 1
Query: 1 ERIEALEAEQLAVSGASAASAFEGISDD-LRVGARRLAFIQKWIVPAAAVLVAL------INIYFGIRGIRVWQSNRADEIFNTPSLFGWGLSIGVAFGVIGFIFARFTSGMGKEKAWGHLRSGAAQAVAASLVGVLIAVGAFVELALGKNTVTMYTPLIVSIAMIVLGSEVVMNLVLYMYRPRKPGE 543
ERIEA+EAE S A+ + FE + V AR+LA++ KW +P+ ++++A + ++FG RG+ R+ E F P GWGL++GV V+GF++AR+ +GM K+ W L +GAAQAV ASL+G ++ V FV AL + P +V + M+ LG E+++N VL +YRPRKPGE
Sbjct: 68 ERIEAMEAEGYRTSAAAQSRVFEDEDESGENVQARKLAWMHKWFLPSLSIVIAAGLIGIGLGLFFGHRGLI-----RSAE-FTPPPASGWGLAVGVVIAVLGFVYARYVAGMAKQPVWSLLHAGAAQAVGASLLGAIVFVSHFVAQALDNQFLLRLLPSVVDLYMVALGVEILLNFVLTLYRPRKPGE 249
BLAST of mRNA_M-pyrifera_M_contig119127.3933.1 vs. uniprot
Match: UPI00199DCFA5 (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=UPI00199DCFA5) HSP 1 Score: 126 bits (317), Expect = 1.640e-30 Identity = 76/186 (40.86%), Postives = 120/186 (64.52%), Query Frame = 1
Query: 1 ERIEALEAEQLAVSGASAASAFEGISDDLRVGARRLAFIQKWIVPAAAVLVALINIYFGIRGIRVWQSNRADEI-----FNTPSLFGWGLSIGVAFGVIGFIFARFTSGMGKEKAWGHLRSGAAQAVAASLVGVLIAVGAFVELALGKNTVTMYTPLIVSIAMIVLGSEVVMNLVLYMYRPRKPGE 543
ER+EA+EA L A A++ FE +DDLR+ A+RLA++ + ++P +L+A + I G+ V++ +A E+ F+ P GW +++G+ FGV F+FAR+ SG+GK W +LR+GAAQAV ++LV IA+G FV+ A G + V Y ++ M++LG+E V++ +L +YRPRK GE
Sbjct: 68 ERVEAMEAASLTAQQARASTVFEENADDLRLAAKRLAWMHRLLLPMVGLLLAGLLI-----GVGVFRFQQARELVDPDKFSAPDARGWAIALGLIFGVSNFLFARYVSGLGKVPMWVNLRAGAAQAVGSALVCAAIAIGQFVDYA-GPDAVLRYLQVVFPAMMVMLGAEFVLSFLLNIYRPRKAGE 247
BLAST of mRNA_M-pyrifera_M_contig119127.3933.1 vs. uniprot
Match: A0A357KXC8_9BACT (PHB domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A357KXC8_9BACT) HSP 1 Score: 125 bits (315), Expect = 3.160e-30 Identity = 75/182 (41.21%), Postives = 113/182 (62.09%), Query Frame = 1
Query: 1 ERIEALEAEQLAVSGASAASAFEGISDDLRVGARRLAFIQKWIVPAAAVLVALINIYFGIRGIRVWQSNRADEIFNT-PSLFGWGLSIGVAFGVIGFIFARFTSGMGKEKAWGHLRSGAAQAVAASLVGVLIAVGAFVELALGKNTVTMYTPLIVSIAMIVLGSEVVMNLVLYMYRPRKPGE 543
ER+E++EAE A SGA+ +S F+ + ++R A RLA++ +W +P +++VA+ G V + + + F T P+ GW +SIGV VIGFIFARF +GM K+KAW L +G+ AV A+L+G +AV FV A TV Y +++AM+ L E++M+ VL +YRPR+ GE
Sbjct: 68 ERLESMEAEAYAASGAAQSSVFDEAAREIRSAAARLAWMHRWFLPGMSLVVAVAFAGIGFARFLVTRGSMLETPFWTQPTQPGWAISIGVGAAVIGFIFARFVAGMAKQKAWVLLNAGSGAAVGAALIGAALAVAHFVAFAAKDTTVLRYLGPSLAVAMMALAGEMLMSFVLNLYRPRRAGE 249
BLAST of mRNA_M-pyrifera_M_contig119127.3933.1 vs. uniprot
Match: A0A2E2N7S7_9BACT (PHB domain-containing protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E2N7S7_9BACT) HSP 1 Score: 125 bits (313), Expect = 6.130e-30 Identity = 80/185 (43.24%), Postives = 113/185 (61.08%), Query Frame = 1
Query: 1 ERIEALEAEQLAVSGASAASAFEGISDDLRVGARRLAFIQKWIVPAAAVLVALINIYFGI----RGIRVWQSNRADEIFNTPSLFGWGLSIGVAFGVIGFIFARFTSGMGKEKAWGHLRSGAAQAVAASLVGVLIAVGAFVELALGKNTVTMYTPLIVSIAMIVLGSEVVMNLVLYMYRPRKPGE 543
ER EA+E EQLA AASAFE D+ V ARRLA Q++ +P ++ +A I I G+ G + +R D + GW L IG+A +GF+FARF SGM ++K W LR GA+ AV +L+G+ +++G F+++A G VT + V + +IVLG+E+V+N VL MYRPRK GE
Sbjct: 79 ERAEAIEQEQLAAD--PAASAFETTEGDVPVAARRLAGFQRFGLPIVSLSIAFILIATGVVRFAAGKAILDGDRIDAVTTER---GWALVIGLALAFVGFVFARFVSGMAQQKIWASLRGGASFAVGTALLGLAMSIGHFIDIASGPEWVTHGLIVAVPVFLIVLGAEIVLNFVLDMYRPRKAGE 258
BLAST of mRNA_M-pyrifera_M_contig119127.3933.1 vs. uniprot
Match: UPI00198E0318 (Uncharacterized protein n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=UPI00198E0318) HSP 1 Score: 123 bits (308), Expect = 2.880e-29 Identity = 78/187 (41.71%), Postives = 118/187 (63.10%), Query Frame = 1
Query: 1 ERIEALEAEQLAVSGASAASAFEGISDDLRVGARRLAFIQKWIVPAAAVLVALINIYFGIRGIRVWQSNRADEIFN------TPSLFGWGLSIGVAFGVIGFIFARFTSGMGKEKAWGHLRSGAAQAVAASLVGVLIAVGAFVELALGKNTVTMYTPLIVSIAMIVLGSEVVMNLVLYMYRPRKPGE 543
ER+EALEAE + SG + +S F+ SD+LRV A+RLA++ + ++PA ++ +A I I G W+ A N PS G +S+G+ VIGF+FAR+ SGM K+KAW +LR+GAAQ V A+++G + + FV+ A G ++V Y ++ MIV+G+E ++N VL +YRPRK G+
Sbjct: 68 ERLEALEAESIERSGVAGSSVFDTSSDELRVAAKRLAWMHRVMLPAISLGLAGIFILLGW-----WRMRHALRDLNILTIDTVPSNRGVQISLGIVLAVIGFVFARYVSGMAKQKAWANLRAGAAQIVGAAVIGFGMVLAQFVDFA-GSDSVIRYIHILFPGLMIVIGAEFILNFVLSIYRPRKAGD 248 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119127.3933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119127.3933.1 >prot_M-pyrifera_M_contig119127.3933.1 ID=prot_M-pyrifera_M_contig119127.3933.1|Name=mRNA_M-pyrifera_M_contig119127.3933.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp ERIEALEAEQLAVSGASAASAFEGISDDLRVGARRLAFIQKWIVPAAAVLback to top mRNA from alignment at M-pyrifera_M_contig119127:3..545- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119127.3933.1 ID=mRNA_M-pyrifera_M_contig119127.3933.1|Name=mRNA_M-pyrifera_M_contig119127.3933.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=543bp|location=Sequence derived from alignment at M-pyrifera_M_contig119127:3..545- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119127:3..545- >mRNA_M-pyrifera_M_contig119127.3933.1 ID=mRNA_M-pyrifera_M_contig119127.3933.1|Name=mRNA_M-pyrifera_M_contig119127.3933.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1086bp|location=Sequence derived from alignment at M-pyrifera_M_contig119127:3..545- (Macrocystis pyrifera P11B4 male)back to top |