mRNA_M-pyrifera_M_contig118785.3869.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig118785.3869.1
Unique NamemRNA_M-pyrifera_M_contig118785.3869.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig118785.3869.1 vs. uniprot
Match: A9LFH8_KARBR (Arylsulfatase A (Fragment) n=1 Tax=Karenia brevis TaxID=156230 RepID=A9LFH8_KARBR)

HSP 1 Score: 175 bits (443), Expect = 3.600e-52
Identity = 86/161 (53.42%), Postives = 105/161 (65.22%), Query Frame = 1
Query:    4 AILSGLSPWNHGMLGYG-VVAIRFPYEMPRAMSEGGYVSASIGKDHFGWQYTVEGLGHGFRHGYGNTTLYDGLGSGLPGSNEYDDYDQWFQTIHPGKVPMAPG-LDWNSWMGGHWPYNESSHPTAWTGRTAVAAIHSFAKSRAQTNAPFFLKVSFHRPHTP 480
            AIL+G SPW HGMLGY   +A ++P EMP  M+  G  +A +GKDHFGW  T +       HG+ +  +YDGLGSG PG  EYDDYD+WFQ   PG+ P+  G L WN W G  + Y+E  HPTAWTGR AV+ +H FA        PFFLKVSFHRPH+P
Sbjct:   73 AILTGRSPWRHGMLGYADSLAEKYPVEMPSLMATAGLRTAVVGKDHFGWNKTSD---RPVAHGFQDLDIYDGLGSGFPGGGEYDDYDRWFQQYKPGQNPLKSGNLGWNDWAGAVYEYDEWFHPTAWTGRRAVSLVHEFAGK----GHPFFLKVSFHRPHSP 226          
BLAST of mRNA_M-pyrifera_M_contig118785.3869.1 vs. uniprot
Match: A0A813AUU2_9DINO (Hypothetical protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A813AUU2_9DINO)

HSP 1 Score: 177 bits (448), Expect = 6.950e-50
Identity = 82/160 (51.25%), Postives = 109/160 (68.12%), Query Frame = 1
Query:    4 AILSGLSPWNHGMLGYGVVAIRFPYEMPRAMSEGGYVSASIGKDHFGWQYTVEGLGHGFRHGYGNTTLYDGLGSGLPGSNEYDDYDQWFQTIHPGKVPMAPG-LDWNSWMGGHWPYNESSHPTAWTGRTAVAAIHSFAKSRAQTNAPFFLKVSFHRPHTP 480
            AIL+G SPW HGMLGYG VA R+P E+ R+M+  G  ++ +GK+HFGW  T    G    H +    +YDGLG+G    +E+DDYD+WFQ   PG+ P+A G LDWNSW G  + Y+E  HPTAWTG++A   + S +++ A+   PFFLKVSFHRPH+P
Sbjct:   76 AILTGRSPWRHGMLGYGAVAERYPQEVARSMAAAGLRTSVVGKNHFGWNRTS---GRPIAHEFSELQIYDGLGNGFKNGSEFDDYDRWFQQRMPGQDPLASGGLDWNSWRGAPYEYSERLHPTAWTGQSARRVLSSLSRASAKAAQPFFLKVSFHRPHSP 232          
BLAST of mRNA_M-pyrifera_M_contig118785.3869.1 vs. uniprot
Match: A0A1Q9CAU4_SYMMI (Arylsulfatase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CAU4_SYMMI)

HSP 1 Score: 176 bits (446), Expect = 5.080e-48
Identity = 82/160 (51.25%), Postives = 108/160 (67.50%), Query Frame = 1
Query:    4 AILSGLSPWNHGMLGYGVVAIRFPYEMPRAMSEGGYVSASIGKDHFGWQYTVEGLGHGFRHGYGNTTLYDGLGSGLPGSNEYDDYDQWFQTIHPGKVPMAPG-LDWNSWMGGHWPYNESSHPTAWTGRTAVAAIHSFAKSRAQTNAPFFLKVSFHRPHTP 480
            AIL+G SPW HGMLGYG VA R+P E+ R+M+  G  ++ +GK+HFGW  T    G    H +    +YDGLG+G    +E+DDYD+WFQ   PG+ P+A G LDWNSW G  + Y+E  HPTAWTG+ A   + S +++ A+   PFFLKVSFHRPH+P
Sbjct: 1071 AILTGRSPWRHGMLGYGAVAERYPQEVARSMAAAGLRTSVVGKNHFGWNRTS---GRPIAHEFSELQIYDGLGNGFKNGSEFDDYDRWFQQRMPGQDPLASGGLDWNSWRGAPYEYSERLHPTAWTGQLARRVLSSLSRASAKAAQPFFLKVSFHRPHSP 1227          
BLAST of mRNA_M-pyrifera_M_contig118785.3869.1 vs. uniprot
Match: A0A1X7VMB8_AMPQE (Sulfatase domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VMB8_AMPQE)

HSP 1 Score: 171 bits (432), Expect = 9.270e-48
Identity = 86/160 (53.75%), Postives = 105/160 (65.62%), Query Frame = 1
Query:    1 TAILSGLSPWNHGMLGYGVVAIRFPYEMPRAMSEGGYVSASIGKDHFGWQYTVEGLGHGFRHGYGNTTLYDGLGSGLPGSNEYDDYDQWFQTIHPGKVPMAPGLDWNSWMGGHWPYNESSHPTAWTGRTAVAAIHSFAKSRAQTNAPFFLKVSFHRPHTP 480
            +A+L+GLSPW HGMLGYG +A R+ YEMPR MSE GY + SIGKDHFGW  T      G  HGY +T LYDGL      ++E+DDYD WF    PG  PM  GL +N + G  +   E  HPTAW GR+AV  I ++++S      PFFLKVSFHRPH+P
Sbjct:   78 SALLTGLSPWYHGMLGYGSIAHRYSYEMPRVMSENGYYTHSIGKDHFGWNKTANS---GMSHGYNSTYLYDGLEE----NSEFDDYDHWFAKEMPGVDPMKTGLTFNDYRGRPYALPEYYHPTAWVGRSAVDFIQNYSRSE-----PFFLKVSFHRPHSP 225          
BLAST of mRNA_M-pyrifera_M_contig118785.3869.1 vs. uniprot
Match: A0A0M0JJW5_9EUKA (Choline-sulfatase (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JJW5_9EUKA)

HSP 1 Score: 139 bits (350), Expect = 1.910e-35
Identity = 75/158 (47.47%), Postives = 90/158 (56.96%), Query Frame = 1
Query:   40 MLGYGVVAIRFPYEMPRAMSEGGYVSASIGKDHFGWQYTVEGLGHGFRHGYGNTTLYDGLGSGLPGSN------EYDDYDQWFQTIHPGKVPMAP-----GLDWNSWMGGHWPYNESSHPTAWTGRTAVAAIHSFAKSRAQTNAPFFLKVSFHRPHTP 480
            MLGYG VA  +P   P+ + + GY++AS+GKDHFGW  T +    G  HGY  T LYDGLG   P +       EYDDYD+WF    PG+ P A      G  WN W G  + Y E  HPTAW G  AVA    F K+   +  PF LKVSFHRPH+P
Sbjct:    1 MLGYGDVAEHYPLVFPQLLRDAGYITASLGKDHFGWNATSDS---GIAHGYDRTVLYDGLGRWDPSARPWPWNGEYDDYDRWFAQQMPGQDPSATLDPLDGDGWNGWHGKAFVYEERLHPTAWLGAQAVA----FLKAHDPSGQPFLLKVSFHRPHSP 151          
BLAST of mRNA_M-pyrifera_M_contig118785.3869.1 vs. uniprot
Match: R5UQB1_9BACT (Uncharacterized protein n=5 Tax=Odoribacter TaxID=283168 RepID=R5UQB1_9BACT)

HSP 1 Score: 134 bits (338), Expect = 3.990e-34
Identity = 77/159 (48.43%), Postives = 97/159 (61.01%), Query Frame = 1
Query:    4 AILSGLSPWNHGMLGYGVVAIRFPYEMPRAMSEGGYVSASIGKDHFGWQYTVEGLGHGFRHGYGNTTLYDGLGSGLPGSNEYDDYDQWFQTIHPGKVPMAPGLDWNSWMGGHWPYNESSHPTAWTGRTAVAAIHSFAKSRAQTNAPFFLKVSFHRPHTP 480
            A+L+GLSPW+HGM+GYGVVA R+ YEMPR + E GY +  IGK H+  Q T+    HGF HG    TL D  G  +  +    DY  WF+   PGK P A G+ WN   GG +P +E  HPT WTG  AV  IH +     +++ P FLKVSF RPH+P
Sbjct:   82 ALLTGLSPWHHGMMGYGVVAERYRYEMPRLLRERGYYTFGIGKMHWFPQKTL----HGF-HG----TLVDESGR-VEQNGFVSDYRDWFKLNAPGKNPDALGIGWNDHTGGVYPLDEKLHPTWWTGEMAVEFIHHY-----KSDKPLFLKVSFARPHSP 225          
BLAST of mRNA_M-pyrifera_M_contig118785.3869.1 vs. uniprot
Match: A0A812VAB8_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812VAB8_SYMPI)

HSP 1 Score: 130 bits (328), Expect = 3.580e-33
Identity = 66/135 (48.89%), Postives = 84/135 (62.22%), Query Frame = 1
Query:   79 EMPRAMSEGGYVSASIGKDHFGWQYTVEGLGHGFRHGYGNTTLYDGLGSGLPGSNEYDDYDQWFQTIHPGKVPMAPG-LDWNSWMGGHWPYNESSHPTAWTGRTAVAAIHSFAKSRAQTNAPFFLKVSFHRPHTP 480
            E+ R+M   G  +  IGK+HFGW  T    G    H + +  +YDGLG+G    +E+DDYDQWFQ   PG+ P+A G LDWNSW G  + Y E  HPTAWTGR+    + +  KS +    PFFLKVSFHRPH+P
Sbjct:    1 ELARSMGAAGLRTVVIGKNHFGWNRTS---GKPVAHEFEDLQIYDGLGNGFKNGSEFDDYDQWFQQQMPGQDPLASGGLDWNSWRGAAYEYPEWLHPTAWTGRSTRRTLLALGKSAS----PFFLKVSFHRPHSP 128          
BLAST of mRNA_M-pyrifera_M_contig118785.3869.1 vs. uniprot
Match: F0YB90_AURAN (Sulfatase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB90_AURAN)

HSP 1 Score: 133 bits (335), Expect = 4.340e-33
Identity = 71/167 (42.51%), Postives = 98/167 (58.68%), Query Frame = 1
Query:    4 AILSGLSPWNHGMLGYGVVAIRFPY-EMPRAMSEGGYVSASIGKDHFGWQYTVEGLGHGFRHGYGNTTLYDGLGSGLPGSNEYDDYDQWFQTIHPGKVPMAPG-------LDWNSWMGGHWPYNESSHPTAWTGRTAVAAIHSFAKSRAQTNAPFFLKVSFHRPHTP 480
            AIL+G  PW+HGMLG+G +A+ +PY E+PR ++  GY + S+GK+HF   Y     G    HG+     YDG+ +      E+D YD+WF    PG+ P+A G       L ++ + G  + Y+E  HPTAW G TA  A+   A S A  +AP FLK SFHRPH+P
Sbjct: 1074 AILTGRKPWHHGMLGFGDIALTYPYAELPRCLARVGYATVSVGKNHF---YNEMSGGENPGHGFAKRYTYDGIIA------EFDSYDRWFNASLPGRDPLATGIAEFGEELAFDDYRGAPYAYDEQFHPTAWVGATARGALRRHAASNA--SAPLFLKASFHRPHSP 1229          
BLAST of mRNA_M-pyrifera_M_contig118785.3869.1 vs. uniprot
Match: A0A7V3L3U8_9BACT (Arylsulfatase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V3L3U8_9BACT)

HSP 1 Score: 127 bits (319), Expect = 1.970e-31
Identity = 73/159 (45.91%), Postives = 94/159 (59.12%), Query Frame = 1
Query:    4 AILSGLSPWNHGMLGYGVVAIRFPYEMPRAMSEGGYVSASIGKDHFGWQYTVEGLGHGFRHGYGNTTLYDGLGSGLPGSNEYDDYDQWFQTIHPGKVPMAPGLDWNSWMGGHWPYNESSHPTAWTGRTAVAAIHSFAKSRAQTNAPFFLKVSFHRPHTP 480
            AIL+GLSPW+HGMLGYG VA R+P+E+PRAM++ GY + +IGK H+  Q       HGF HG     L D  G  +       DY QWF+   P   P A G+ WNS++   +   E  HPT WTG  AV  I ++ + +     PFFLKVSF RPH+P
Sbjct:   81 AILTGLSPWHHGMLGYGKVAERYPFELPRAMADAGYYTFAIGKLHYHPQRNY----HGF-HG----ALLDESGR-VESPGFISDYRQWFKKNAPDLDPDATGIGWNSYLSSPYALPEELHPTRWTGDRAVEFIENYDRDQ-----PFFLKVSFARPHSP 224          
BLAST of mRNA_M-pyrifera_M_contig118785.3869.1 vs. uniprot
Match: A0A0F5JDY2_9BACT (Choline-sulfatase n=4 Tax=Parabacteroides TaxID=375288 RepID=A0A0F5JDY2_9BACT)

HSP 1 Score: 127 bits (319), Expect = 2.210e-31
Identity = 73/159 (45.91%), Postives = 94/159 (59.12%), Query Frame = 1
Query:    7 ILSGLSPWNHGMLGYGVVAIRFPYEMPRAMSEGGYVSASIGKDHFGWQYTVEGLGHGFRHGYGNTTLYDGLGSGLPGSNEY-DDYDQWFQTIHPGKVPMAPGLDWNSWMGGHWPYNESSHPTAWTGRTAVAAIHSFAKSRAQTNAPFFLKVSFHRPHTP 480
            +L+GLSPWNHGMLGYG VA  + YEMP+ + E GY +  IGK H+  Q T+    HGF     + TL D   SG   S ++  DY +WFQ   PGK P   G+ WN  + G +  +E  HPTAWTG+TA   I ++       + P FLKVSF RPH+P
Sbjct:  104 LLTGLSPWNHGMLGYGQVATEYKYEMPKMLRELGYYTFGIGKMHWFPQKTL----HGF-----HATLVDE--SGRSESPDFISDYREWFQLNAPGKNPDLTGIGWNDHVAGVYQLDERLHPTAWTGQTACELIRNY-----DNDQPLFLKVSFARPHSP 246          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118785.3869.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A9LFH8_KARBR3.600e-5253.42Arylsulfatase A (Fragment) n=1 Tax=Karenia brevis ... [more]
A0A813AUU2_9DINO6.950e-5051.25Hypothetical protein n=3 Tax=Symbiodinium TaxID=29... [more]
A0A1Q9CAU4_SYMMI5.080e-4851.25Arylsulfatase n=1 Tax=Symbiodinium microadriaticum... [more]
A0A1X7VMB8_AMPQE9.270e-4853.75Sulfatase domain-containing protein n=1 Tax=Amphim... [more]
A0A0M0JJW5_9EUKA1.910e-3547.47Choline-sulfatase (Fragment) n=1 Tax=Chrysochromul... [more]
R5UQB1_9BACT3.990e-3448.43Uncharacterized protein n=5 Tax=Odoribacter TaxID=... [more]
A0A812VAB8_SYMPI3.580e-3348.89Hypothetical protein n=1 Tax=Symbiodinium pilosum ... [more]
F0YB90_AURAN4.340e-3342.51Sulfatase domain-containing protein n=1 Tax=Aureoc... [more]
A0A7V3L3U8_9BACT1.970e-3145.91Arylsulfatase n=1 Tax=Armatimonadetes bacterium Ta... [more]
A0A0F5JDY2_9BACT2.210e-3145.91Choline-sulfatase n=4 Tax=Parabacteroides TaxID=37... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118785contigM-pyrifera_M_contig118785:29..520 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score175.3
Seed ortholog evalue2.4e-41
Seed eggNOG ortholog400682.PAC_15726007
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Type I phosphodiesterase / nucleotide pyrophosphatase
EggNOG OGs39JSQ@33154,3C138@33208,COG3119@1,KOG3867@2759
COG Functional cat.P
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons1
Model size492
Cds size492
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815706.963665-CDS-M-pyrifera_M_contig118785:28..5201622815706.963665-CDS-M-pyrifera_M_contig118785:28..520Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118785 29..520 +
1692277531.445112-CDS-M-pyrifera_M_contig118785:28..5201692277531.445112-CDS-M-pyrifera_M_contig118785:28..520Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118785 29..520 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118785.3869.1prot_M-pyrifera_M_contig118785.3869.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig118785 29..520 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig118785.3869.1

>prot_M-pyrifera_M_contig118785.3869.1 ID=prot_M-pyrifera_M_contig118785.3869.1|Name=mRNA_M-pyrifera_M_contig118785.3869.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=164bp
TAILSGLSPWNHGMLGYGVVAIRFPYEMPRAMSEGGYVSASIGKDHFGWQ
YTVEGLGHGFRHGYGNTTLYDGLGSGLPGSNEYDDYDQWFQTIHPGKVPM
APGLDWNSWMGGHWPYNESSHPTAWTGRTAVAAIHSFAKSRAQTNAPFFL
KVSFHRPHTPNVS*
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mRNA from alignment at M-pyrifera_M_contig118785:29..520+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig118785.3869.1 ID=mRNA_M-pyrifera_M_contig118785.3869.1|Name=mRNA_M-pyrifera_M_contig118785.3869.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig118785:29..520+ (Macrocystis pyrifera P11B4 male)
ACAGCAATTCTGAGTGGATTATCGCCTTGGAATCATGGTATGTTAGGGTA TGGTGTGGTAGCGATTCGTTTCCCGTACGAGATGCCTCGTGCCATGAGTG AGGGTGGGTATGTGAGTGCTTCGATCGGAAAAGACCACTTTGGGTGGCAA TACACTGTGGAGGGACTGGGTCATGGGTTTCGCCATGGGTATGGGAATAC GACACTGTATGACGGGTTAGGCAGTGGGCTGCCCGGATCCAACGAATACG ATGACTACGACCAATGGTTCCAAACCATCCACCCTGGCAAAGTCCCAATG GCACCTGGGTTGGACTGGAATTCGTGGATGGGAGGCCATTGGCCATACAA CGAGTCCTCACACCCCACTGCATGGACTGGGAGGACAGCGGTGGCAGCCA TCCATTCCTTTGCCAAATCTAGAGCACAAACCAACGCCCCATTCTTCCTC AAGGTATCCTTCCACCGACCACACACCCCAAACGTAAGTTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig118785:29..520+

>mRNA_M-pyrifera_M_contig118785.3869.1 ID=mRNA_M-pyrifera_M_contig118785.3869.1|Name=mRNA_M-pyrifera_M_contig118785.3869.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=984bp|location=Sequence derived from alignment at M-pyrifera_M_contig118785:29..520+ (Macrocystis pyrifera P11B4 male)
ACAGCAATTCTGAGTGGATTATCGCCTTGGAATCATGGTATGTTAGGGTA
TGGTGTGGTAGCGATTCGTTTCCCGTACGAGATGCCTCGTGCCATGAGTG
AGGGTGGGTATGTGAGTGCTTCGATCGGAAAAGACCACTTTGGGTGGCAA
TACACTGTGGAGGGACTGGGTCATGGGTTTCGCCATGGGTATGGGAATAC
GACACTGTATGACGGGTTAGGCAGTGGGCTGCCCGGATCCAACGAATACG
ATGACTACGACCAATGGTTCCAAACCATCCACCCTGGCAAAGTCCCAATG
GCACCTGGGTTGGACTGGAATTCGTGGATGGGAGGCCATTGGCCATACAA
CGAGTCCTCACACCCCACTGCATGGACTGGGAGGACAGCGGTGGCAGCCA
TCCATTCCTTTGCCAAATCTAGAGCACAAACCAACGCCCCATTCTTCCTC
AAGGTATCCTTCCACCGACCACACACCCCAAACGTAAGTTGAACAGCAAT
TCTGAGTGGATTATCGCCTTGGAATCATGGTATGTTAGGGTATGGTGTGG
TAGCGATTCGTTTCCCGTACGAGATGCCTCGTGCCATGAGTGAGGGTGGG
TATGTGAGTGCTTCGATCGGAAAAGACCACTTTGGGTGGCAATACACTGT
GGAGGGACTGGGTCATGGGTTTCGCCATGGGTATGGGAATACGACACTGT
ATGACGGGTTAGGCAGTGGGCTGCCCGGATCCAACGAATACGATGACTAC
GACCAATGGTTCCAAACCATCCACCCTGGCAAAGTCCCAATGGCACCTGG
GTTGGACTGGAATTCGTGGATGGGAGGCCATTGGCCATACAACGAGTCCT
CACACCCCACTGCATGGACTGGGAGGACAGCGGTGGCAGCCATCCATTCC
TTTGCCAAATCTAGAGCACAAACCAACGCCCCATTCTTCCTCAAGGTATC
CTTCCACCGACCACACACCCCAAACGTAAGTTGA
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