mRNA_M-pyrifera_M_contig118513.3826.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118513.3826.1 vs. uniprot
Match: UPI001C698DA1 (AsmA family protein n=1 Tax=Hoeflea sp. WL0058 TaxID=2865987 RepID=UPI001C698DA1) HSP 1 Score: 255 bits (652), Expect = 6.890e-79 Identity = 125/179 (69.83%), Postives = 158/179 (88.27%), Query Frame = 1
Query: 1 LQWAGTEIKPGEAIGALSLDAEIQMQNGRAMLNDVIIELEGNRGIGVLDVQNPEDGAPGISGTLAFNSLDVGSFLRAFTPLPQSGEEIAETIDTSFLHQLTLDMRLSSQAATLGPLNLTNLAAAARIVEGRAVFDIGDAEAYGGRLSGRIVIAESGAQGGGEVKFSARDINLAAALGAL 537
L+WAGT+IKPGEA+GA+SLDAE+Q+Q GR++L+ +I+ELEGNRGIGVLD++ ++ PG+SGTLAF++LD+ SFLRAFTPLPQSG++I+ TIDTSFLHQL+LD+RLS+Q+ATLGPLNL N+AAA RI +GRA FD+GDA AYGGRL GRI++AE G +GGG +KFS RDINL AL AL
Sbjct: 291 LEWAGTKIKPGEALGAVSLDAEVQIQRGRSILDKLILELEGNRGIGVLDIEYSDEQKPGVSGTLAFSTLDIMSFLRAFTPLPQSGDDISSTIDTSFLHQLSLDLRLSAQSATLGPLNLANVAAAGRIADGRATFDVGDATAYGGRLLGRIMLAEKGIEGGGGIKFSGRDINLEQALNAL 469
BLAST of mRNA_M-pyrifera_M_contig118513.3826.1 vs. uniprot
Match: UPI00145AE8AD (hypothetical protein n=1 Tax=Nitratireductor sp. XY-223 TaxID=2561926 RepID=UPI00145AE8AD) HSP 1 Score: 248 bits (632), Expect = 3.870e-76 Identity = 128/181 (70.72%), Postives = 154/181 (85.08%), Query Frame = 1
Query: 1 LQWAGTEIKPGEAIGALSLDAEIQMQNGRAMLNDVIIELEGNRGIGVLDVQNPEDGAPGISGTLAFNSLDVGSFLRAFTPLPQSGEEIAETIDTSFLHQLTLDMRLSSQAATLGPLNLTNLAAAARIVEGRAVFDIGDAEAYGGRLSGRIVIAESGAQGGGEVKFSARDINLAAALGALEI 543
L+W GT+IKPGEAIGALSLDAE+Q QNGRAM + +I+ELEGNRGIGVLD + +D PGISGTLAFNSLD+ SFLRAFTPLP++GE+IA+TIDTSFL QL LDMRLSSQ+A+ GP+++TN+AA A+I EGRA FDIGDA AY G + GRI +AESG +GGGE++FSAR+INL AL L I
Sbjct: 266 LEWVGTQIKPGEAIGALSLDAELQWQNGRAMFDKLIVELEGNRGIGVLDFKQYDD-KPGISGTLAFNSLDIASFLRAFTPLPRTGEDIAQTIDTSFLSQLMLDMRLSSQSASFGPISMTNVAATAKIDEGRATFDIGDATAYNGSVLGRITLAESGIEGGGEIRFSARNINLEQALNDLGI 445
BLAST of mRNA_M-pyrifera_M_contig118513.3826.1 vs. uniprot
Match: UPI001C58B741 (hypothetical protein n=1 Tax=Pseudohoeflea sp. DP4N28-3 TaxID=2860393 RepID=UPI001C58B741) HSP 1 Score: 209 bits (533), Expect = 3.510e-61 Identity = 107/176 (60.80%), Postives = 135/176 (76.70%), Query Frame = 1
Query: 1 LQWAGTEIKPGEAIGALSLDAEIQMQNGRAMLNDVIIELEGNRGIGVLDVQNPEDGAPGISGTLAFNSLDVGSFLRAFTPLPQSGEEIAETIDTSFLHQLTLDMRLSSQAATLGPLNLTNLAAAARIVEGRAVFDIGDAEAYGGRLSGRIVIAESGAQGGGEVKFSARDINLAAAL 528
L+W+GTEIKPGEAIGAL L AE+ L+D+I+ ++ NRGIGVLDV E+ P I+GTLAFNSLD+ SFL AFTPLP SG EIA TIDT FL +L LD+RLS+Q+A GP+++TNLAAAAR+ GRA FD+GDA AYGG L GRI I+E+G GGG ++ +ARD+++ A L
Sbjct: 283 LEWSGTEIKPGEAIGALQLSAEVTTSENVTKLDDLIVVIDENRGIGVLDVTLDEEAPPVIAGTLAFNSLDITSFLAAFTPLPHSGAEIASTIDTRFLRELGLDLRLSAQSARFGPISMTNLAAAARVDSGRATFDLGDATAYGGSLIGRIAISEAGTNGGGTLQVTARDVDIGALL 458
BLAST of mRNA_M-pyrifera_M_contig118513.3826.1 vs. uniprot
Match: UPI000C1A806E (AsmA family protein n=1 Tax=Pararhizobium haloflavum TaxID=2037914 RepID=UPI000C1A806E) HSP 1 Score: 205 bits (522), Expect = 9.670e-60 Identity = 106/181 (58.56%), Postives = 137/181 (75.69%), Query Frame = 1
Query: 1 LQWAGTEIKPGEAIGALSLDAEIQMQNGRAMLNDVIIELEGNRGIGVLDVQNPEDGAPGISGTLAFNSLDVGSFLRAFTPLPQSGEEIAETIDTSFLHQLTLDMRLSSQAATLGPLNLTNLAAAARIVEGRAVFDIGDAEAYGGRLSGRIVIAESGAQGGGEVKFSARDINLAAALGALEI 543
L+W+GTEIKPGEAIGAL L+AE+Q + L D+II+++ NRGIG LD+ + P ++GTLA+++LDVG+FLRAFTPLP G+ IA TIDT FL QL +D+RLS+Q A +G L L NLAAAARI EGRA+FDIGDA AYGG + GRI I+E G GGGE++FSA+ ++ A A+ I
Sbjct: 278 LRWSGTEIKPGEAIGALELEAEVQTALPQVRLEDLIIDIDDNRGIGALDISWQDAERPTVAGTLAYDTLDVGAFLRAFTPLPSDGDAIASTIDTGFLRQLGMDLRLSAQTARVGTLTLGNLAAAARIEEGRALFDIGDATAYGGNVLGRIAISEDGFDGGGELQFSAQGVDFGAVYDAIGI 458
BLAST of mRNA_M-pyrifera_M_contig118513.3826.1 vs. uniprot
Match: A0A5E8A0V8_9HYPH (AsmA_2 domain-containing protein n=1 Tax=Hoeflea sp. EC-HK425 TaxID=2038388 RepID=A0A5E8A0V8_9HYPH) HSP 1 Score: 199 bits (506), Expect = 1.910e-57 Identity = 99/171 (57.89%), Postives = 135/171 (78.95%), Query Frame = 1
Query: 1 LQWAGTEIKPGEAIGALSLDAEIQMQNGRAMLNDVIIELEGNRGIGVLDVQNPEDGAPGISGTLAFNSLDVGSFLRAFTPLPQSGEEIAETIDTSFLHQLTLDMRLSSQAATLGPLNLTNLAAAARIVEGRAVFDIGDAEAYGGRLSGRIVIAESGAQGGGEVKFSARDIN 513
L+W+GT+I+PGEA+GAL L A++ + +A L+D+II ++ NRGIGVLD++ ED P I+GTLAFNSLD+ SFL+AFTPLP++G +IA TIDT FL ++ LD+RLS+Q+A+ GP+ L+NLAAAAR+ GRA FD+GDA AYGG L GR+ ++E G GG +V+ SAR N
Sbjct: 286 LEWSGTDIRPGEALGALELTAKVTAERTKAKLDDLIIIIDRNRGIGVLDMELREDAPPLIAGTLAFNSLDIASFLQAFTPLPKAGTDIASTIDTRFLREIGLDLRLSAQSASFGPVALSNLAAAARVDRGRANFDVGDATAYGGSLIGRVALSEKGVDGGFKVQLSARKTN 456
BLAST of mRNA_M-pyrifera_M_contig118513.3826.1 vs. uniprot
Match: A0A2E2M980_9HYPH (AsmA_2 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2E2M980_9HYPH) HSP 1 Score: 199 bits (505), Expect = 3.040e-57 Identity = 100/179 (55.87%), Postives = 136/179 (75.98%), Query Frame = 1
Query: 1 LQWAGTEIKPGEAIGALSLDAEIQMQNGRAMLNDVIIELEGNRGIGVLDVQNPEDGAPGISGTLAFNSLDVGSFLRAFTPLPQSGEEIAETIDTSFLHQLTLDMRLSSQAATLGPLNLTNLAAAARIVEGRAVFDIGDAEAYGGRLSGRIVIAESGAQGGGEVKFSARDINLAAALGAL 537
L+W+GT+I+PGEAIGAL L A++ A L+D+I+ ++ NRGIGVLD+ + P ++GTLAFN+LDV SFLRAFTPLP SG EIA TIDT FL +L LD+RLS+Q+A LGP+ ++N+AAAAR+ GRA FD+GDA AYGG L GR++++E+G++GG + + S RD+ A AL
Sbjct: 282 LEWSGTDIRPGEAIGALELGAKLSTSEMTAKLDDLILVVDQNRGIGVLDLAFDKSAPPLVAGTLAFNTLDVTSFLRAFTPLPHSGSEIASTIDTRFLRELRLDLRLSAQSARLGPITMSNMAAAARVDGGRATFDLGDATAYGGNLLGRVLVSEAGSRGGAKFQLSVRDMEFGALFDAL 460
BLAST of mRNA_M-pyrifera_M_contig118513.3826.1 vs. uniprot
Match: A0A098T5D1_9HYPH (AsmA_2 domain-containing protein n=2 Tax=Hoeflea sp. BAL378 TaxID=1547437 RepID=A0A098T5D1_9HYPH) HSP 1 Score: 198 bits (504), Expect = 3.240e-57 Identity = 100/171 (58.48%), Postives = 136/171 (79.53%), Query Frame = 1
Query: 1 LQWAGTEIKPGEAIGALSLDAEIQMQNGRAMLNDVIIELEGNRGIGVLDVQNPEDGAPGISGTLAFNSLDVGSFLRAFTPLPQSGEEIAETIDTSFLHQLTLDMRLSSQAATLGPLNLTNLAAAARIVEGRAVFDIGDAEAYGGRLSGRIVIAESGAQGGGEVKFSARDIN 513
L+W+G +IKPGEA+GAL L A+I + +A L+D+I+ ++ NRGIGVLDV ED P ++GTLAFNSLD+ SFL+AFTPLP +G +IA TIDT FL ++ LD+RLS+Q+A+LGP+ L+NLAAAAR+ +GRA FD+GDA AYGG + GRI ++E G +GG +V+ SAR I+
Sbjct: 277 LEWSGADIKPGEALGALELTAKITAEPTKAKLDDLIVMIDRNRGIGVLDVALREDEPPLVAGTLAFNSLDIASFLQAFTPLPVTGADIASTIDTRFLREIGLDLRLSAQSASLGPVVLSNLAAAARVEQGRANFDVGDATAYGGSVMGRIALSEKGIEGGVKVQLSARQID 447
BLAST of mRNA_M-pyrifera_M_contig118513.3826.1 vs. uniprot
Match: A9CYZ7_HOEPD (Uncharacterized protein involved in outer membrane biogenesis n=1 Tax=Hoeflea phototrophica (strain DSM 17068 / NCIMB 14078 / DFL-43) TaxID=411684 RepID=A9CYZ7_HOEPD) HSP 1 Score: 197 bits (501), Expect = 1.020e-56 Identity = 98/171 (57.31%), Postives = 133/171 (77.78%), Query Frame = 1
Query: 1 LQWAGTEIKPGEAIGALSLDAEIQMQNGRAMLNDVIIELEGNRGIGVLDVQNPEDGAPGISGTLAFNSLDVGSFLRAFTPLPQSGEEIAETIDTSFLHQLTLDMRLSSQAATLGPLNLTNLAAAARIVEGRAVFDIGDAEAYGGRLSGRIVIAESGAQGGGEVKFSARDIN 513
L+W+G +IKPGEA+GAL L A++ + RA L+D+II ++ NRGIGVLD++ ED P I+GTLAFN LD+ SFL+AFTPLP+ G +IA TIDT FL ++ LD+RLS+Q+A+ GP+ L+NLAAAAR+ +GRA FD+GDA AYGG L GRI ++E G GG +++ S R+ N
Sbjct: 286 LEWSGADIKPGEALGALELTAQLSAEPTRAKLDDLIIMIDANRGIGVLDLELHEDTPPMIAGTLAFNRLDIASFLQAFTPLPRGGVDIASTIDTRFLREIGLDLRLSAQSASFGPVVLSNLAAAARVEQGRANFDVGDATAYGGSLIGRIAVSEKGIDGGLDIQLSTRNTN 456
BLAST of mRNA_M-pyrifera_M_contig118513.3826.1 vs. uniprot
Match: A0A1C1YTN3_9HYPH (AsmA_2 domain-containing protein n=1 Tax=Hoeflea olei TaxID=1480615 RepID=A0A1C1YTN3_9HYPH) HSP 1 Score: 197 bits (501), Expect = 1.060e-56 Identity = 100/171 (58.48%), Postives = 136/171 (79.53%), Query Frame = 1
Query: 1 LQWAGTEIKPGEAIGALSLDAEIQMQNGRAMLNDVIIELEGNRGIGVLDVQNPEDGAPGISGTLAFNSLDVGSFLRAFTPLPQSGEEIAETIDTSFLHQLTLDMRLSSQAATLGPLNLTNLAAAARIVEGRAVFDIGDAEAYGGRLSGRIVIAESGAQGGGEVKFSARDIN 513
L+W+G +IKPGEA+GAL L A++ ++ +A L+D+I+ ++ NRGIGVLD+ ED P ++GTLAFNSLDV SFL+AFTPLP SG +IA TIDT FL ++ LD+RLS+Q+A+LG + L+NLAAAAR+ EGRA FDIGDA AYGG + GR+ ++E G +GG +V+ SAR I+
Sbjct: 286 LEWSGADIKPGEALGALELSAKLTAESAKAKLDDLIVMIDRNRGIGVLDIALREDEPPLVAGTLAFNSLDVVSFLQAFTPLPASGADIASTIDTRFLREIGLDLRLSAQSASLGAVVLSNLAAAARVEEGRANFDIGDATAYGGSVMGRMALSEKGVEGGVKVQLSARRID 456
BLAST of mRNA_M-pyrifera_M_contig118513.3826.1 vs. uniprot
Match: A0A317PM59_9HYPH (AsmA protein n=2 Tax=Hoeflea marina TaxID=274592 RepID=A0A317PM59_9HYPH) HSP 1 Score: 196 bits (499), Expect = 1.470e-56 Identity = 97/181 (53.59%), Postives = 137/181 (75.69%), Query Frame = 1
Query: 1 LQWAGTEIKPGEAIGALSLDAEIQMQNGRAMLNDVIIELEGNRGIGVLDVQNPEDGAPGISGTLAFNSLDVGSFLRAFTPLPQSGEEIAETIDTSFLHQLTLDMRLSSQAATLGPLNLTNLAAAARIVEGRAVFDIGDAEAYGGRLSGRIVIAESGAQGGGEVKFSARDINLAAALGALEI 543
L+W+GTEIKPG+A+GAL + A+I A L+++ I ++ NRG GVLDV+ P + P + GTLAFN+LD+ SFL+AFTPLP++G++IA TIDT FL ++ LD+RLS+Q A GP+ ++NLAAAAR+ EGRA+FDIGDA AYGG L+GRI I+E G GG +++ SAR+ + A+++
Sbjct: 266 LEWSGTEIKPGDALGALEMTADISAGGLAAKLDNLTIMIDQNRGTGVLDVELPAEAPPTVGGTLAFNTLDITSFLKAFTPLPKAGDDIASTIDTRFLREIGLDLRLSAQTARFGPVVMSNLAAAARVEEGRAMFDIGDATAYGGNLTGRIAISEKGVDGGAKLRISARNTDFGKLFDAMDM 446 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118513.3826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118513.3826.1 >prot_M-pyrifera_M_contig118513.3826.1 ID=prot_M-pyrifera_M_contig118513.3826.1|Name=mRNA_M-pyrifera_M_contig118513.3826.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp LQWAGTEIKPGEAIGALSLDAEIQMQNGRAMLNDVIIELEGNRGIGVLDVback to top mRNA from alignment at M-pyrifera_M_contig118513:2..544- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118513.3826.1 ID=mRNA_M-pyrifera_M_contig118513.3826.1|Name=mRNA_M-pyrifera_M_contig118513.3826.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=543bp|location=Sequence derived from alignment at M-pyrifera_M_contig118513:2..544- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118513:2..544- >mRNA_M-pyrifera_M_contig118513.3826.1 ID=mRNA_M-pyrifera_M_contig118513.3826.1|Name=mRNA_M-pyrifera_M_contig118513.3826.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1086bp|location=Sequence derived from alignment at M-pyrifera_M_contig118513:2..544- (Macrocystis pyrifera P11B4 male)back to top |