mRNA_M-pyrifera_M_contig118419.3813.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118419.3813.1 vs. uniprot
Match: A0A812WJM1_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812WJM1_9DINO) HSP 1 Score: 62.8 bits (151), Expect = 2.650e-10 Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 7 DALLDPTDDWHARVMWKHACSKGVSGTPFYFVNDVLINGPS--TEQGWKALLDPLVQD 174
+A DPT +AR+ WK+ CS+GVSGTPF+FVN VL + + + W+AL+DPL+ D
Sbjct: 151 NAYADPTLYNNARISWKYGCSRGVSGTPFFFVNGVLTDASADWSLSQWQALIDPLLAD 208
BLAST of mRNA_M-pyrifera_M_contig118419.3813.1 vs. uniprot
Match: A0A8B8BLE9_CRAVI (uncharacterized protein LOC111111455 n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8BLE9_CRAVI) HSP 1 Score: 59.7 bits (143), Expect = 4.660e-9 Identity = 24/57 (42.11%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 13 LLDPTDDWHARVMWKHACSKGVSGTPFYFVNDVLINGPSTE--QGWKALLDPLVQDN 177
+ DP D ARV WK+ C++G+SGTP + VNDV+++ ++ + W+ ++DPL+ DN
Sbjct: 156 MADPNIDEDARVGWKYTCTRGISGTPMFTVNDVIVSADASWGLEEWRKVIDPLLGDN 212
BLAST of mRNA_M-pyrifera_M_contig118419.3813.1 vs. uniprot
Match: A0A024USG4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USG4_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 1.660e-8 Identity = 25/48 (52.08%), Postives = 31/48 (64.58%), Query Frame = 1
Query: 31 DWHARVMWKHACSKGVSGTPFYFVNDVLINGPSTE--QGWKALLDPLV 168
D R WKHAC++G+SGTP Y +NDVLIN T W A L+PL+
Sbjct: 39 DSDTRTEWKHACTRGISGTPQYLLNDVLINAEPTWTFDDWMAFLEPLL 86
BLAST of mRNA_M-pyrifera_M_contig118419.3813.1 vs. uniprot
Match: UPI00148A8737 (uncharacterized protein LOC105341287 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A8737) HSP 1 Score: 57.4 bits (137), Expect = 3.260e-8 Identity = 22/57 (38.60%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 13 LLDPTDDWHARVMWKHACSKGVSGTPFYFVNDVLINGPSTE--QGWKALLDPLVQDN 177
+ DP D ARV WK+ C++G+SGTP + +NDV++ ++ + W+ ++DPL+ +N
Sbjct: 156 MADPLVDEDARVEWKYTCTRGISGTPMFTINDVIVAASASWSLEDWRKVIDPLLSNN 212
BLAST of mRNA_M-pyrifera_M_contig118419.3813.1 vs. uniprot
Match: K1PPX8_CRAGI (Eppin n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1PPX8_CRAGI) HSP 1 Score: 57.4 bits (137), Expect = 4.570e-8 Identity = 22/57 (38.60%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 13 LLDPTDDWHARVMWKHACSKGVSGTPFYFVNDVLINGPSTE--QGWKALLDPLVQDN 177
+ DP D ARV WK+ C++G+SGTP + +NDV++ ++ + W+ ++DPL+ +N
Sbjct: 156 MADPLVDEDARVEWKYTCTRGISGTPMFTINDVIVAADASWSLEDWRKVIDPLLSNN 212
BLAST of mRNA_M-pyrifera_M_contig118419.3813.1 vs. uniprot
Match: A0A816QS37_9BILA (Hypothetical protein n=3 Tax=Rotaria TaxID=231623 RepID=A0A816QS37_9BILA) HSP 1 Score: 55.8 bits (133), Expect = 1.270e-7 Identity = 23/54 (42.59%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 31 DWHARVMWKHACSKGVSGTPFYFVNDVLINGPSTEQ--GWKALLDPLVQDNDDI 186
++ RV WK+ACS+GV GTP +F+N V+I+ T WK+++DP++ ND +
Sbjct: 164 NFETRVSWKYACSRGVLGTPTFFINGVVISADPTWSLNDWKSVIDPILGSNDKV 217
BLAST of mRNA_M-pyrifera_M_contig118419.3813.1 vs. uniprot
Match: UPI0010A32865 (uncharacterized protein LOC114717665 n=2 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A32865) HSP 1 Score: 55.5 bits (132), Expect = 1.460e-7 Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 1
Query: 1 ISDALLDPTDDWHARVMWKHACSKGVSGTPFYFVNDVLINGPSTE---QGWKALLDPLVQDN 177
I D D H RV +K+A S+GVS TPF++VN L+ G + +GW+ ++DPLV N
Sbjct: 162 IKSGFNDRKTDLHTRVSFKYAASRGVSETPFFYVNGFLLPGTGSALDYKGWRKVIDPLVGSN 223
BLAST of mRNA_M-pyrifera_M_contig118419.3813.1 vs. uniprot
Match: UPI001CF49BA6 (uncharacterized protein LOC122957631 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF49BA6) HSP 1 Score: 55.1 bits (131), Expect = 1.650e-7 Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 1 ISDALLDPTDDWHARVMWKHACSKGVSGTPFYFVNDVLING--PSTEQG-WKALLDPLV 168
I D L + R+ WK+ CS+ VSGTPF+F+ND+ + PS G WK L+DPL+
Sbjct: 152 IKDGLSNTDYYQDTRISWKYGCSRTVSGTPFFFLNDIFVTEATPSWSVGDWKKLIDPLL 210
BLAST of mRNA_M-pyrifera_M_contig118419.3813.1 vs. uniprot
Match: A0A8J1TNN7_OWEFU (Ofus.G043352 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TNN7_OWEFU) HSP 1 Score: 54.3 bits (129), Expect = 2.780e-7 Identity = 23/52 (44.23%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 19 DPTDDWHARVMWKHACSKGVSGTPFYFVNDVLINGPSTEQG-WKALLDPLVQ 171
D T + +ARV WK+ CS+GV+GTP +FVN V ++ S ++G W + +D L++
Sbjct: 145 DDTLENNARVAWKYGCSRGVAGTPTFFVNGVFVDAASWDEGKWHSFIDELLK 196
BLAST of mRNA_M-pyrifera_M_contig118419.3813.1 vs. uniprot
Match: A0A7J7P4F8_9MAGN (Thioredoxin-like_fold domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7P4F8_9MAGN) HSP 1 Score: 54.3 bits (129), Expect = 3.450e-7 Identity = 25/61 (40.98%), Postives = 38/61 (62.30%), Query Frame = 1
Query: 1 ISDALLDPTDDWHARVMWKHACSKGVSGTPFYFVNDVLIN--GPSTE-QGWKALLDPLVQD 174
+ D D RV +K+ CS+GV GTPF+FVN L+ G + + +GWK+++DPL+ D
Sbjct: 159 VESGFSDRQTDLATRVSFKYGCSRGVYGTPFFFVNGFLLPDAGDAIDYKGWKSIIDPLIAD 219 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118419.3813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118419.3813.1 >prot_M-pyrifera_M_contig118419.3813.1 ID=prot_M-pyrifera_M_contig118419.3813.1|Name=mRNA_M-pyrifera_M_contig118419.3813.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=63bp ISDALLDPTDDWHARVMWKHACSKGVSGTPFYFVNDVLINGPSTEQGWKAback to top mRNA from alignment at M-pyrifera_M_contig118419:310..498- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118419.3813.1 ID=mRNA_M-pyrifera_M_contig118419.3813.1|Name=mRNA_M-pyrifera_M_contig118419.3813.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=189bp|location=Sequence derived from alignment at M-pyrifera_M_contig118419:310..498- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118419:310..498- >mRNA_M-pyrifera_M_contig118419.3813.1 ID=mRNA_M-pyrifera_M_contig118419.3813.1|Name=mRNA_M-pyrifera_M_contig118419.3813.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=378bp|location=Sequence derived from alignment at M-pyrifera_M_contig118419:310..498- (Macrocystis pyrifera P11B4 male)back to top |