mRNA_M-pyrifera_M_contig118186.3767.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig118186.3767.1
Unique NamemRNA_M-pyrifera_M_contig118186.3767.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig118186.3767.1 vs. uniprot
Match: A0A482RJZ7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RJZ7_9ARCH)

HSP 1 Score: 152 bits (385), Expect = 7.630e-44
Identity = 83/174 (47.70%), Postives = 111/174 (63.79%), Query Frame = 1
Query:    1 YFPEIFALAGNWQLVHEYGPWFSYWDTARANIFRRDQGAVDGLKAMQRLMRYNDFRNDPLSAQGCEEGAGNIGRSAENAIACRDDLNIDTCKSNISALGLRDHVATDAKLTAFSLVDPNPQPPTKHPVSTYAQSGPTHDQQPPFVFSQSKFQAAS--HLGVPDKVQWPWVKIDF 516
            YFP IF + G   LV ++GPWFS+ +T+RANIFRRD   V    + +RL+RYNDF +DPLS QGC +       SAENAIACRDDLN      +ISALG RDHVA DAK T+++ +           ++   Q+GPT+DQQP F FS +    AS  H G+PD  ++PW+++ +
Sbjct:   28 YFPFIFNITGGVALVQQFGPWFSWANTSRANIFRRDHVKVTDDASFKRLIRYNDFESDPLSTQGCTQPPS----SAENAIACRDDLNPINGTYSISALGHRDHVAIDAKYTSYARM-------ANGGLTAATQAGPTYDQQPVFSFSNTTPDLASLPHYGLPDTWKFPWMEVTW 190          
BLAST of mRNA_M-pyrifera_M_contig118186.3767.1 vs. uniprot
Match: A0A1V9XW89_9ACAR (Phospholipase B-like (Fragment) n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XW89_9ACAR)

HSP 1 Score: 128 bits (321), Expect = 3.190e-34
Identity = 77/169 (45.56%), Postives = 95/169 (56.21%), Query Frame = 1
Query:    1 YFPEIFALAGNWQLVHEYGPWFSYWDTARANIFRRDQGAVDGLKAMQRLMRYNDFRNDPLSAQGCEEGAGNIGRSAENAIACRDDLNIDTCKSNISALGLRDHVATDAKLTAFSLVDPNPQPPTKHPVSTYAQSGPTHDQQPPFVFSQSKF-QAASHLGVPDKVQWPWV 504
            YFPEIF ++G W LV+E+G WF+Y  TARA +F+RD G V  ++ + RL+R NDFRNDPLS   C         SAENAIA R DL+         ALG R   ATD K+   ++V            S   Q GPT+DQQP F +SQS F Q   H G PD   +P V
Sbjct:   24 YFPEIFNISGQWDLVNEFGDWFTYDKTARALLFKRDHGRVSNVEGLHRLLRSNDFRNDPLSRCQCTPPY-----SAENAIAARSDLSPANGTYPFPALGHRPRGATDVKVINSTMV---------RDFSMLIQCGPTNDQQPTFAWSQSDFNQIIRHEGHPDVFNFPPV 178          
BLAST of mRNA_M-pyrifera_M_contig118186.3767.1 vs. uniprot
Match: A0A2I9LPG8_9SCOR (Phospholipase B-like n=2 Tax=Centruroides TaxID=6875 RepID=A0A2I9LPG8_9SCOR)

HSP 1 Score: 133 bits (334), Expect = 2.780e-33
Identity = 77/160 (48.12%), Postives = 95/160 (59.38%), Query Frame = 1
Query:    4 FPEIFALAGNWQLVHEYGPWFSYWDTARANIFRRDQGAVDGLKAMQRLMRYNDFRNDPLSAQGCEEGAGNIGRSAENAIACRDDLNIDTCKSNISALGLRDHVATDAKLTAFSLVDPNPQPPTKHPVSTYAQSGPTHDQQPPFVFSQSKFQAASHLGVPD 483
            FP+IF ++G  ++V +YG WFSY  T RA IF+RDQG VD L +M ++MRYNDF+ DPLS   C         SAENAIA R DLN        SALG R H A D KLT++SL         +      A +GPT+DQQPPF +S+S F    H G PD
Sbjct:  385 FPKIFNMSGTQEMVKKYGDWFSYDKTPRALIFKRDQGNVDDLTSMTKIMRYNDFKKDPLSRCNCTPPY-----SAENAIAARSDLNPANGTYPFSALGHRAHGAIDMKLTSYSL---------QKGYQFIAYAGPTYDQQPPFQWSKSDFINTPHQGHPD 530          
BLAST of mRNA_M-pyrifera_M_contig118186.3767.1 vs. uniprot
Match: UPI001C927940 (putative phospholipase B-like 2 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C927940)

HSP 1 Score: 132 bits (331), Expect = 7.870e-33
Identity = 85/177 (48.02%), Postives = 105/177 (59.32%), Query Frame = 1
Query:    1 YFPEIFALAGNWQLVHEYGPWFSYWDTARANIFRRDQGAVDGLKAMQRLMRYNDFRNDPLSAQGCEEGAGNIGRSAENAIACRDDLNIDTCKSNISALGLRDHVATDAKLTAFSLVDPNPQPPTKHPVSTYAQ-SGPTHDQQPPFVFSQSKFQAA---SHLGVPDKVQWPWVKIDFQ 519
            YFPEIF ++GN +LV EYG WFSY  T RA IFRRDQ  V  + +M +LMRYND++NDPLSA  CE        SAENAI+ R DLN        SAL  R H ATD KLT   L+          P+  +   SGPT+DQQPPF +S    +AA   +H G PD  Q+  ++ +FQ
Sbjct:  391 YFPEIFNMSGNPELVDEYGDWFSYDMTPRARIFRRDQDGVTDVGSMMKLMRYNDYKNDPLSACDCEPPY-----SAENAISARCDLNPANGTYPFSALSHRLHGATDMKLTTTKLM----------PLMEFIGISGPTYDQQPPFQWSL--LEAADNLAHWGHPDVFQFGPIQWNFQ 550          
BLAST of mRNA_M-pyrifera_M_contig118186.3767.1 vs. uniprot
Match: UPI0018854039 (putative phospholipase B-like 2 n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018854039)

HSP 1 Score: 130 bits (327), Expect = 2.900e-32
Identity = 82/173 (47.40%), Postives = 100/173 (57.80%), Query Frame = 1
Query:    1 YFPEIFALAGNWQLVHEYGPWFSYWDTARANIFRRDQGAVDGLKAMQRLMRYNDFRNDPLSAQGCEEGAGNIGRSAENAIACRDDLNIDTCKSNISALGLRDHVATDAKLTAFSLVDPNPQPPTKHPVSTYAQSGPTHDQQPPFVFSQSKFQAAS-HLGVPD-----KVQWPW 501
            +FP IF ++GN  LV ++G WFSY  T RA IFRRDQ AV  +  M RLMRYNDF++DPLSA  C+        SAEN I+ R DLN         ALG R H ATD KLT   LV      P    +S    +GPT+DQQPPF +S++ F A + H G PD      +QW W
Sbjct:  392 FFPAIFNMSGNPALVAKFGDWFSYERTPRALIFRRDQAAVTDVGGMMRLMRYNDFKHDPLSACDCQPPY-----SAENGISARCDLNPADGTYPFGALGHRSHGATDMKLTTTKLV------PGMEFISI---AGPTYDQQPPFQWSKADFAATTPHQGHPDLFKFEPIQWRW 550          
BLAST of mRNA_M-pyrifera_M_contig118186.3767.1 vs. uniprot
Match: A0A2C9JZC0_BIOGL (Phospholipase B-like n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JZC0_BIOGL)

HSP 1 Score: 128 bits (322), Expect = 1.050e-31
Identity = 76/168 (45.24%), Postives = 96/168 (57.14%), Query Frame = 1
Query:    1 YFPEIFALAGNWQLVHEYGPWFSYWDTARANIFRRDQGAVDGLKAMQRLMRYNDFRNDPLSAQGCEEGAGNIGRSAENAIACRDDLNIDTCKSNISALGLRDHVATDAKLTAFSLVDPNPQPPTKHPVSTYAQSGPTHDQQPPFVFSQSKFQAASHLGVPDKVQWPWV 504
            YFP IF  +G   LV+++G WF+Y    RA I++RD   V  + +M RLMRYNDF +DPLS+  C         SAENAIACRDDLN        SALG R H+ATD KL  FSL            +S  A S PT+D  PPF +S+S +   SH+G PD   +P +
Sbjct:  352 YFPNIFNASGMPALVNQFGDWFTYDKNPRALIYKRDVPKVVDMNSMTRLMRYNDFMHDPLSSCNCTPPY-----SAENAIACRDDLNPIDGTYPFSALGHRPHIATDMKLANFSL---------SLSLSFLAISSPTYDDLPPFQWSKSDYNTMSHVGHPDLWMFPLI 505          
BLAST of mRNA_M-pyrifera_M_contig118186.3767.1 vs. uniprot
Match: A0A6F9DPM0_9ASCI (Phospholipase B-like n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DPM0_9ASCI)

HSP 1 Score: 127 bits (318), Expect = 6.020e-31
Identity = 73/172 (42.44%), Postives = 98/172 (56.98%), Query Frame = 1
Query:    1 YFPEIFALAGNWQLVHEYGPWFSYWDTARANIFRRDQGAVDGLKAMQRLMRYNDFRNDPLSAQGCEEGAGNIGRSAENAIACRDDLNIDTCKSNISALGLRDHVATDAKLTAFSLVDPNPQPPTKHPVSTYAQSGPTHDQQPPFVFSQSKFQAASHLGVPDKVQWPWVKIDF 516
            YF  IF  +G   +  +YG WFSY  T RA IF R+Q  V  L  M +LMRYN+F++DPLSA  C         S+EN IA R DLN  + +  I+ALG R+H ATD K+T+  ++               A+ GPTHDQQP FV+S+S F   SH G+PD+  +  V + +
Sbjct:  414 YFKSIFEKSGTAAMEKKYGNWFSYDKTPRALIFARNQSQVSDLSHMIKLMRYNNFKHDPLSACNCTPPY-----SSENTIAARCDLNPQSGQYPIAALGFRNHGATDVKVTSSEMI---------RKYEMVAECGPTHDQQPVFVWSESPFAHLSHRGMPDRYDFEPVHVTW 571          
BLAST of mRNA_M-pyrifera_M_contig118186.3767.1 vs. uniprot
Match: B3RK05_TRIAD (Phospholipase B-like n=2 Tax=Trichoplax TaxID=10227 RepID=B3RK05_TRIAD)

HSP 1 Score: 126 bits (317), Expect = 6.740e-31
Identity = 70/161 (43.48%), Postives = 96/161 (59.63%), Query Frame = 1
Query:    1 YFPEIFALAGNWQLVHEYGPWFSYWDTARANIFRRDQGAVDGLKAMQRLMRYNDFRNDPLSAQGCEEGAGNIGRSAENAIACRDDLNIDTCKSNISALGLRDHVATDAKLTAFSLVDPNPQPPTKHPVSTYAQSGPTHDQQPPFVFSQSKFQAASHLGVPD 483
            YF  IF ++GN +   +YG WF++    RA IF+RDQ  V+ ++++ +LMRYNDF++DPLS   C         SAENAI+ R DLN    K NI ALG R H  TD+K T +++            + +YA +GPTH+QQPPF +S +KF     LG PD
Sbjct:  383 YFSSIFNMSGNQEQAKKYGNWFTHDKCPRALIFKRDQHKVNSMESLMKLMRYNDFKHDPLSRCNCTPPY-----SAENAISARSDLNPADGKYNIGALGHRCHGGTDSKSTNYTMFHSG--------LKSYAIAGPTHEQQPPFRWSTAKFNMTKPLGHPD 530          
BLAST of mRNA_M-pyrifera_M_contig118186.3767.1 vs. uniprot
Match: A0A482RPK5_9ARCH (SWIM-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RPK5_9ARCH)

HSP 1 Score: 120 bits (300), Expect = 6.890e-31
Identity = 68/172 (39.53%), Postives = 100/172 (58.14%), Query Frame = 1
Query:    7 PEIFALAGNWQLVHEYGPWFSYWDTARANIFRRDQGAVDGLKAMQRLMRYNDFRNDPLSAQGCEEGAGNIGRSAENAIACRDDLNIDTCKSNISALGLRDHVATDAKLTAFS-LVDPNPQPPTKHPVSTYAQSGPTHDQQPPFVFSQSKFQAASHLGVPDKVQWPWVKIDFQ 519
            P +FA++G WQ+VH YG  ++Y  T+RA IF RDQG V     ++ L+RYNDF +DPL+ QGC +       S  NAIA R DL   + K  I  +  +D  A DAK T+ S ++  N        + +  Q+GPT+ QQP F +S +     +H+G PD   +PW+++D+Q
Sbjct:   44 PTLFAISGQWQMVHLYGAHYTYNATSRALIFARDQGKVVDEATLRALIRYNDFEHDPLAIQGCLDNKP----SGSNAIAERGDLTPKSYKC-IPDVSFQDEAALDAKYTSASRMLSGN--------LVSVMQAGPTYYQQPVFSWSNTSLTGIAHVGQPDTWNFPWIEVDWQ 202          
BLAST of mRNA_M-pyrifera_M_contig118186.3767.1 vs. uniprot
Match: UPI001BB139DF (putative phospholipase B-like 2 n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB139DF)

HSP 1 Score: 126 bits (316), Expect = 1.060e-30
Identity = 78/170 (45.88%), Postives = 98/170 (57.65%), Query Frame = 1
Query:    1 YFPEIFALAGNWQLVHEYGPWFSYWDTARANIFRRDQGAVDGLKAMQRLMRYNDFRNDPLSAQGCEEGAGNIGRSAENAIACRDDLNIDTCKSNISALGLRDHVATDAKLTAFSLVDPNPQPPTKHPVSTYAQSGPTHDQQPPFVFSQSKFQAASHLGVPDKVQWPWVKI 510
            +F +I+  +G       YG WFSY  TARANIFRR++  V  LK+M +LMRYN+F +DPLSA  C     N   SAENAIA R DLN        SALG R H ATD K+T  S++           +S  A  GPTHDQQPPF +S+S F    HLG PD   +  +++
Sbjct:  401 FFKDIYDKSGWPANKRRYGNWFSYNKTARANIFRRNETDVTDLKSMIKLMRYNNFEHDPLSACDC-----NPPYSAENAIAARSDLNPVKGHYPFSALGHRLHGATDMKVTTSSMMKS---------LSMIAVCGPTHDQQPPFQWSKSDFNQTLHLGHPDLFDFKPIEV 556          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118186.3767.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482RJZ7_9ARCH7.630e-4447.70Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A1V9XW89_9ACAR3.190e-3445.56Phospholipase B-like (Fragment) n=1 Tax=Tropilaela... [more]
A0A2I9LPG8_9SCOR2.780e-3348.13Phospholipase B-like n=2 Tax=Centruroides TaxID=68... [more]
UPI001C9279407.870e-3348.02putative phospholipase B-like 2 n=2 Tax=Amphibalan... [more]
UPI00188540392.900e-3247.40putative phospholipase B-like 2 n=1 Tax=Pollicipes... [more]
A0A2C9JZC0_BIOGL1.050e-3145.24Phospholipase B-like n=1 Tax=Biomphalaria glabrata... [more]
A0A6F9DPM0_9ASCI6.020e-3142.44Phospholipase B-like n=1 Tax=Phallusia mammillata ... [more]
B3RK05_TRIAD6.740e-3143.48Phospholipase B-like n=2 Tax=Trichoplax TaxID=1022... [more]
A0A482RPK5_9ARCH6.890e-3139.53SWIM-type domain-containing protein n=1 Tax=archae... [more]
UPI001BB139DF1.060e-3045.88putative phospholipase B-like 2 n=1 Tax=Lytechinus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118186contigM-pyrifera_M_contig118186:25..546 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score129.0
Seed ortholog evalue2.1e-27
Seed eggNOG ortholog10228.TriadP63473
Preferred namePLBD2
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.phospholipase
EggNOG OGs38SPP@33154,3BEP4@33208,KOG3774@1,KOG3774@2759
COG Functional cat.T
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons1
Model size522
Cds size522
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815701.2996342-CDS-M-pyrifera_M_contig118186:24..5461622815701.2996342-CDS-M-pyrifera_M_contig118186:24..546Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118186 25..546 -
1692277528.738894-CDS-M-pyrifera_M_contig118186:24..5461692277528.738894-CDS-M-pyrifera_M_contig118186:24..546Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118186 25..546 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118186.3767.1prot_M-pyrifera_M_contig118186.3767.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig118186 25..546 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig118186.3767.1

>prot_M-pyrifera_M_contig118186.3767.1 ID=prot_M-pyrifera_M_contig118186.3767.1|Name=mRNA_M-pyrifera_M_contig118186.3767.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp
YFPEIFALAGNWQLVHEYGPWFSYWDTARANIFRRDQGAVDGLKAMQRLM
RYNDFRNDPLSAQGCEEGAGNIGRSAENAIACRDDLNIDTCKSNISALGL
RDHVATDAKLTAFSLVDPNPQPPTKHPVSTYAQSGPTHDQQPPFVFSQSK
FQAASHLGVPDKVQWPWVKIDFQ*
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mRNA from alignment at M-pyrifera_M_contig118186:25..546-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig118186.3767.1 ID=mRNA_M-pyrifera_M_contig118186.3767.1|Name=mRNA_M-pyrifera_M_contig118186.3767.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig118186:25..546- (Macrocystis pyrifera P11B4 male)
TACTTTCCCGAGATCTTCGCGCTGGCCGGAAATTGGCAGCTGGTGCACGA GTACGGGCCGTGGTTCTCCTACTGGGACACTGCGCGGGCCAACATCTTCC GACGAGACCAAGGTGCCGTGGACGGACTCAAGGCCATGCAGCGGCTCATG CGCTACAACGACTTCCGAAACGACCCACTCAGCGCCCAAGGGTGCGAGGA AGGGGCTGGGAATATAGGACGGTCGGCGGAAAACGCAATCGCGTGCAGAG ACGACCTCAACATTGACACGTGCAAATCCAACATCTCCGCACTCGGCCTC CGAGACCACGTCGCCACCGACGCGAAACTCACCGCCTTCTCCCTCGTCGA CCCAAACCCACAACCCCCGACCAAGCACCCCGTGTCCACCTACGCACAGT CCGGACCCACGCACGACCAGCAACCCCCCTTCGTCTTCTCCCAGTCCAAG TTCCAAGCAGCTTCGCACCTCGGAGTCCCAGACAAGGTGCAGTGGCCGTG GGTCAAGATCGACTTTCAGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig118186:25..546-

>mRNA_M-pyrifera_M_contig118186.3767.1 ID=mRNA_M-pyrifera_M_contig118186.3767.1|Name=mRNA_M-pyrifera_M_contig118186.3767.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig118186:25..546- (Macrocystis pyrifera P11B4 male)
TACTTTCCCGAGATCTTCGCGCTGGCCGGAAATTGGCAGCTGGTGCACGA
GTACGGGCCGTGGTTCTCCTACTGGGACACTGCGCGGGCCAACATCTTCC
GACGAGACCAAGGTGCCGTGGACGGACTCAAGGCCATGCAGCGGCTCATG
CGCTACAACGACTTCCGAAACGACCCACTCAGCGCCCAAGGGTGCGAGGA
AGGGGCTGGGAATATAGGACGGTCGGCGGAAAACGCAATCGCGTGCAGAG
ACGACCTCAACATTGACACGTGCAAATCCAACATCTCCGCACTCGGCCTC
CGAGACCACGTCGCCACCGACGCGAAACTCACCGCCTTCTCCCTCGTCGA
CCCAAACCCACAACCCCCGACCAAGCACCCCGTGTCCACCTACGCACAGT
CCGGACCCACGCACGACCAGCAACCCCCCTTCGTCTTCTCCCAGTCCAAG
TTCCAAGCAGCTTCGCACCTCGGAGTCCCAGACAAGGTGCAGTGGCCGTG
GGTCAAGATCGACTTTCAGTAGTACTTTCCCGAGATCTTCGCGCTGGCCG
GAAATTGGCAGCTGGTGCACGAGTACGGGCCGTGGTTCTCCTACTGGGAC
ACTGCGCGGGCCAACATCTTCCGACGAGACCAAGGTGCCGTGGACGGACT
CAAGGCCATGCAGCGGCTCATGCGCTACAACGACTTCCGAAACGACCCAC
TCAGCGCCCAAGGGTGCGAGGAAGGGGCTGGGAATATAGGACGGTCGGCG
GAAAACGCAATCGCGTGCAGAGACGACCTCAACATTGACACGTGCAAATC
CAACATCTCCGCACTCGGCCTCCGAGACCACGTCGCCACCGACGCGAAAC
TCACCGCCTTCTCCCTCGTCGACCCAAACCCACAACCCCCGACCAAGCAC
CCCGTGTCCACCTACGCACAGTCCGGACCCACGCACGACCAGCAACCCCC
CTTCGTCTTCTCCCAGTCCAAGTTCCAAGCAGCTTCGCACCTCGGAGTCC
CAGACAAGGTGCAGTGGCCGTGGGTCAAGATCGACTTTCAGTAG
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