mRNA_M-pyrifera_M_contig118024.3743.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118024.3743.1 vs. uniprot
Match: A0A6I6AL62_9PLAN (C-type cytochrome n=13 Tax=Bacteria TaxID=2 RepID=A0A6I6AL62_9PLAN) HSP 1 Score: 380 bits (976), Expect = 3.130e-123 Identity = 180/183 (98.36%), Postives = 183/183 (100.00%), Query Frame = 1
Query: 1 QSPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYPEKYQGNAFIGDVGGNLIHRKTMGSKGATYVASRADENTEFITSPDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGRVYRLLGPNGKVFPVQKLGKLPVDQLVLQMESPNSWNR 549
QSPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYPEKYQGNAFIGDVGGNLIHRKTMGS+GATYVASRADENTEF+TSPDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGR+YRLLGPNGKVFPVQKLGKLPVDQLVLQMESPNSWNR
Sbjct: 306 QSPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYPEKYQGNAFIGDVGGNLIHRKTMGSQGATYVASRADENTEFVTSPDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGRIYRLLGPNGKVFPVQKLGKLPVDQLVLQMESPNSWNR 488
BLAST of mRNA_M-pyrifera_M_contig118024.3743.1 vs. uniprot
Match: A0A517RKF7_9PLAN (Cytochrome c n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RKF7_9PLAN) HSP 1 Score: 352 bits (903), Expect = 1.680e-112 Identity = 168/183 (91.80%), Postives = 175/183 (95.63%), Query Frame = 1
Query: 1 QSPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYPEKYQGNAFIGDVGGNLIHRKTMGSKGATYVASRADENTEFITSPDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGRVYRLLGPNGKVFPVQKLGKLPVDQLVLQMESPNSWNR 549
+SPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYP ++QGNAFIGDVGGNLIHRKTM KGATYVA+RADE+TEFITS DNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGRVYRL P+GK F VQKLGKLPVDQLVLQ+ESPNSWNR
Sbjct: 306 RSPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYPAEFQGNAFIGDVGGNLIHRKTMDGKGATYVATRADEDTEFITSDDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGRVYRLKHPDGKTFKVQKLGKLPVDQLVLQLESPNSWNR 488
BLAST of mRNA_M-pyrifera_M_contig118024.3743.1 vs. uniprot
Match: A6C555_9PLAN (Cytochrome c domain-containing protein n=14 Tax=Planctomycetaceae TaxID=126 RepID=A6C555_9PLAN) HSP 1 Score: 340 bits (872), Expect = 6.010e-108 Identity = 161/183 (87.98%), Postives = 170/183 (92.90%), Query Frame = 1
Query: 1 QSPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYPEKYQGNAFIGDVGGNLIHRKTMGSKGATYVASRADENTEFITSPDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGRVYRLLGPNGKVFPVQKLGKLPVDQLVLQMESPNSWNR 549
+SPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRG AYP+KYQGNAFIGDVGGNLIHRKTM GATYVA+RADE TEFITS DNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGR+YRL+ P G FPVQKLG++ V+QLV Q+ESPN WNR
Sbjct: 308 RSPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGSAYPKKYQGNAFIGDVGGNLIHRKTMDENGATYVATRADEQTEFITSNDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGRIYRLVHPQGNQFPVQKLGEMSVEQLVQQLESPNVWNR 490
BLAST of mRNA_M-pyrifera_M_contig118024.3743.1 vs. uniprot
Match: A0A517WRM1_9PLAN (Cytochrome c n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WRM1_9PLAN) HSP 1 Score: 337 bits (864), Expect = 8.880e-107 Identity = 158/183 (86.34%), Postives = 170/183 (92.90%), Query Frame = 1
Query: 1 QSPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYPEKYQGNAFIGDVGGNLIHRKTMGSKGATYVASRADENTEFITSPDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGRVYRLLGPNGKVFPVQKLGKLPVDQLVLQMESPNSWNR 549
+SPPEPYR VRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRG AYP+ +QGNAFIGDVGGNLIHRKTM SKGATY+A+RADE TEF+TS DNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESG DRGR+YRL+ P G F VQKLGK+P+DQLV Q++SPNSWNR
Sbjct: 308 RSPPEPYREVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGSAYPKAFQGNAFIGDVGGNLIHRKTMDSKGATYIATRADEQTEFVTSKDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGFDRGRIYRLVHPEGNQFRVQKLGKMPIDQLVKQLDSPNSWNR 490
BLAST of mRNA_M-pyrifera_M_contig118024.3743.1 vs. uniprot
Match: A0A517VF44_9PLAN (Cytochrome c n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517VF44_9PLAN) HSP 1 Score: 313 bits (803), Expect = 6.660e-98 Identity = 148/183 (80.87%), Postives = 163/183 (89.07%), Query Frame = 1
Query: 1 QSPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYPEKYQGNAFIGDVGGNLIHRKTMGSKGATYVASRADENTEFITSPDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGRVYRLLGPNGKVFPVQKLGKLPVDQLVLQMESPNSWNR 549
+SP EPYRVVRTARR ADP F KRLS TE ATG+FTSATGVTIYRGGAYPE +QGNAFIGDVGGNLIHRKTM SKGAT++ASRAD+ TEF+TS DNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPED+KR+LDLESGHDRGR+YRL P+ K F V+KLG + + QLV Q+ESPNSWNR
Sbjct: 308 RSPAEPYRVVRTARRVADPEFSKRLSITEKFATGYFTSATGVTIYRGGAYPEPFQGNAFIGDVGGNLIHRKTMESKGATHIASRADKQTEFVTSTDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDLKRYLDLESGHDRGRIYRLSHPDAKQFKVEKLGDMSIGQLVSQLESPNSWNR 490
BLAST of mRNA_M-pyrifera_M_contig118024.3743.1 vs. uniprot
Match: UPI0014241426 (c-type cytochrome n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI0014241426) HSP 1 Score: 278 bits (711), Expect = 1.290e-84 Identity = 131/183 (71.58%), Postives = 154/183 (84.15%), Query Frame = 1
Query: 1 QSPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYPEKYQGNAFIGDVGGNLIHRKTMGSKGATYVASRADENTEFITSPDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGRVYRLLGPNGKVFPVQKLGKLPVDQLVLQMESPNSWNR 549
+SP EP+R+VRT RRA+DPNF KR++ TELV TGFFTSATGVTIYRG AYPE+Y GNAFIGDVGGNLIHRKT+ G +++A+RAD+NTEFITS D WFRPVNFVNAPDG+L+VLDMYRETIEHP+SIPEDIK LDLESGHDRGR+YR+ PN K + L KL ++LV ++ S NSWNR
Sbjct: 300 RSPAEPWRIVRTRRRASDPNFVKRVAKTELVPTGFFTSATGVTIYRGDAYPEEYHGNAFIGDVGGNLIHRKTLTPNGVSFIATRADQNTEFITSTDTWFRPVNFVNAPDGSLYVLDMYRETIEHPYSIPEDIKAFLDLESGHDRGRIYRITPPNWKRQTPKDLSKLSREELVAELASDNSWNR 482
BLAST of mRNA_M-pyrifera_M_contig118024.3743.1 vs. uniprot
Match: A0A4V0XN27_9BACT (Cytochrome c n=1 Tax=Planctomycetia bacterium TaxID=2052181 RepID=A0A4V0XN27_9BACT) HSP 1 Score: 274 bits (700), Expect = 4.600e-83 Identity = 132/183 (72.13%), Postives = 154/183 (84.15%), Query Frame = 1
Query: 1 QSPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYPEKYQGNAFIGDVGGNLIHRKTMGSKGATYVASRADENTEFITSPDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGRVYRLLGPNGKVFPVQKLGKLPVDQLVLQMESPNSWNR 549
+SPPEP+R+VRTARR ADP F LS +E V GFFTSATG TIYRGGAY E+++GNAFIGDVG NLIHRK M GA++VA RADE TEF+TS DNWFRPVNFVNAPDGTL+VLDMYRETIEHP SIPEDIK +DLESG+DRGR++RL+GP+G+ V+++GKLP DQL+ Q SPNSWNR
Sbjct: 308 RSPPEPWRIVRTARRVADPKFAG-LSQSERVPIGFFTSATGATIYRGGAYAEEFRGNAFIGDVGANLIHRKIMTPAGASFVAKRADEMTEFVTSTDNWFRPVNFVNAPDGTLFVLDMYRETIEHPASIPEDIKALVDLESGNDRGRIWRLVGPDGQRMKVEQIGKLPPDQLIKQFWSPNSWNR 489
BLAST of mRNA_M-pyrifera_M_contig118024.3743.1 vs. uniprot
Match: A0A3E0PVP1_9BACT (Dehydrogenase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PVP1_9BACT) HSP 1 Score: 272 bits (696), Expect = 1.580e-82 Identity = 127/183 (69.40%), Postives = 148/183 (80.87%), Query Frame = 1
Query: 1 QSPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYPEKYQGNAFIGDVGGNLIHRKTMGSKGATYVASRADENTEFITSPDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGRVYRLLGPNGKVFPVQKLGKLPVDQLVLQMESPNSWNR 549
+SP EP+R+VRT RRAADPNF R TELVATGFFTSATGVTIYRG AYPE ++GNAFIGDVGGNL+HRKT+ G T+ A+RAD++ EFITS DNWFRPVNFVN PDG L++LDMYRETIEHPFSIPEDIK+HLDLESG DRGR+YR+ P K P L ++ +LV Q+ S N+WNR
Sbjct: 300 KSPAEPWRIVRTRRRAADPNFADRAPATELVATGFFTSATGVTIYRGDAYPEPFRGNAFIGDVGGNLVHRKTLAPNGVTFTATRADQDVEFITSTDNWFRPVNFVNGPDGCLYILDMYRETIEHPFSIPEDIKQHLDLESGDDRGRIYRIAPPEWKQKPFPNLAEMNTSKLVDQLNSTNAWNR 482
BLAST of mRNA_M-pyrifera_M_contig118024.3743.1 vs. uniprot
Match: A0A518CMK3_9PLAN (Cytochrome c n=2 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CMK3_9PLAN) HSP 1 Score: 271 bits (693), Expect = 4.340e-82 Identity = 130/182 (71.43%), Postives = 150/182 (82.42%), Query Frame = 1
Query: 4 SPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYPEKYQGNAFIGDVGGNLIHRKTMGSKGATYVASRADENTEFITSPDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGRVYRLLGPNGKVFPVQKLGKLPVDQLVLQMESPNSWNR 549
SPPEP+R++RT RRA+DP+F KRLS ELV GFFTSATGVTIYRG AYPE+YQGNAFIGDVGGNLIHRKT+ GA ++A RAD++TEFI S D WFRPVNFVNAPDGTL VLDMYRETIEHP+SIPEDIK++L LESGHDRGRVYR++ P K +L +QLV ++ES NSWNR
Sbjct: 306 SPPEPWRIIRTKRRASDPSFAKRLSANELVPIGFFTSATGVTIYRGTAYPEEYQGNAFIGDVGGNLIHRKTLTLDGAAFLAERADQDTEFIRSRDTWFRPVNFVNAPDGTLMVLDMYRETIEHPYSIPEDIKKYLYLESGHDRGRVYRIVSPMMKQIQFPQLKDATSEQLVAELESLNSWNR 487
BLAST of mRNA_M-pyrifera_M_contig118024.3743.1 vs. uniprot
Match: A0A1Y0BNG8_9BACT (K820 n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1Y0BNG8_9BACT) HSP 1 Score: 271 bits (692), Expect = 8.260e-82 Identity = 129/182 (70.88%), Postives = 147/182 (80.77%), Query Frame = 1
Query: 4 SPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYPEKYQGNAFIGDVGGNLIHRKTMGSKGATYVASRADENTEFITSPDNWFRPVNFVNAPDGTLWVLDMYRETIEHPFSIPEDIKRHLDLESGHDRGRVYRLLGPNGKVFPVQKLGKLPVDQLVLQMESPNSWNR 549
SP EP+R+VRT RRA+DPN+RKRL PTELVATGFFTSATGVTIYRG AYPE+++GNAFIGDVGGNL+HRKTM GA+++A RAD+N EFITS D WFRPVNFVN PDG L++LDMYRETIEHP SIPEDIK LDLESG RGR+YRL+ PN KL P +LV +ESPN W R
Sbjct: 339 SPAEPWRIVRTRRRASDPNYRKRLPPTELVATGFFTSATGVTIYRGDAYPEEFRGNAFIGDVGGNLVHRKTMHEAGASFLAVRADDNVEFITSTDTWFRPVNFVNGPDGCLYILDMYRETIEHPVSIPEDIKAFLDLESGDRRGRIYRLVPPNWSRKAPPKLADWPSSELVKALESPNGWTR 520 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118024.3743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118024.3743.1 >prot_M-pyrifera_M_contig118024.3743.1 ID=prot_M-pyrifera_M_contig118024.3743.1|Name=mRNA_M-pyrifera_M_contig118024.3743.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp QSPPEPYRVVRTARRAADPNFRKRLSPTELVATGFFTSATGVTIYRGGAYback to top mRNA from alignment at M-pyrifera_M_contig118024:2..550+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118024.3743.1 ID=mRNA_M-pyrifera_M_contig118024.3743.1|Name=mRNA_M-pyrifera_M_contig118024.3743.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig118024:2..550+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118024:2..550+ >mRNA_M-pyrifera_M_contig118024.3743.1 ID=mRNA_M-pyrifera_M_contig118024.3743.1|Name=mRNA_M-pyrifera_M_contig118024.3743.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1098bp|location=Sequence derived from alignment at M-pyrifera_M_contig118024:2..550+ (Macrocystis pyrifera P11B4 male)back to top |