mRNA_M-pyrifera_M_contig117801.3679.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117801.3679.1 vs. uniprot
Match: A0A6G0Q5C4_9STRA (AAA domain-containing protein (Fragment) n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0Q5C4_9STRA) HSP 1 Score: 165 bits (417), Expect = 2.200e-47 Identity = 86/149 (57.72%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 1 LRSLVAGGGAEGSDSGRWAGVVLSSDLQTRVDAITSSARSARRLDMPFRHVLFHGPPGTGKTLVARRIARESGLDYAIMSGGDVGPLGASAVTQIHGLFRWAKSSSRGLLLFVDEAEAFLG---RRSSNQSEHMRQAVNALLFHTGDQA 438
RSL A+G D A VVL + L+TRV I S R+A P+RH+L +GPPGTGKT+VA+R+AR SG+DYAI+SGGDVGPLG+ AVT++H LF+WA SS RG+L+F+DEAEAFLG R ++ SE MR A+NALL+HTG Q+
Sbjct: 47 FRSLFRRNAAKGQDE--LADVVLRNALETRVFEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWANSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLYHTGTQS 193
BLAST of mRNA_M-pyrifera_M_contig117801.3679.1 vs. uniprot
Match: A0A0D2IW80_9CHLO (AAA domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2IW80_9CHLO) HSP 1 Score: 158 bits (399), Expect = 5.760e-46 Identity = 74/126 (58.73%), Postives = 98/126 (77.78%), Query Frame = 1
Query: 61 VVLSSDLQTRVDAITSSARSARRLDMPFRHVLFHGPPGTGKTLVARRIARESGLDYAIMSGGDVGPLGASAVTQIHGLFRWAKSSSRGLLLFVDEAEAFLGRRSSNQSEHMRQAVNALLFHTGDQA 438
++L L +V ++ ++A + +R PFRH+LF+GPPGTGKTLVA+R+AR SGLDYAI+SGGD+ PL AVTQ+H F WA+ S +GLLLF+DEA+AFLGRRS SE +R A+NALL+ TGDQ+
Sbjct: 87 IILPEGLHNQVRSLAATAANTKRHGAPFRHMLFYGPPGTGKTLVAKRLARTSGLDYAILSGGDIAPLEGGAVTQLHSTFDWAEKSRKGLLLFIDEADAFLGRRSDAMSEGLRGALNALLYRTGDQS 212
BLAST of mRNA_M-pyrifera_M_contig117801.3679.1 vs. uniprot
Match: V9EJ63_PHYPR (AAA domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=V9EJ63_PHYPR) HSP 1 Score: 167 bits (424), Expect = 7.480e-46 Identity = 87/149 (58.39%), Postives = 113/149 (75.84%), Query Frame = 1
Query: 1 LRSLVAGGGAEGSDSGRWAGVVLSSDLQTRVDAITSSARSARRLDMPFRHVLFHGPPGTGKTLVARRIARESGLDYAIMSGGDVGPLGASAVTQIHGLFRWAKSSSRGLLLFVDEAEAFLG---RRSSNQSEHMRQAVNALLFHTGDQA 438
LR+L++ A+G D A VVL S L+TRV I S R+A P+RH+L +GPPGTGKT+VA+R+AR SG+DYAI+SGGDVGPLG+ AVT++H LF+WA SS RG+L+F+DEAEAFLG R ++ SE MR A+NALL+HTG Q+
Sbjct: 411 LRALISQKPAKGQDE--LADVVLRSSLETRVLEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWANSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLYHTGTQS 557
BLAST of mRNA_M-pyrifera_M_contig117801.3679.1 vs. uniprot
Match: A0A8K1FJC0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJC0_PYTOL) HSP 1 Score: 166 bits (420), Expect = 2.700e-45 Identity = 87/149 (58.39%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 1 LRSLVAGGGAEGSDSGRWAGVVLSSDLQTRVDAITSSARSARRLDMPFRHVLFHGPPGTGKTLVARRIARESGLDYAIMSGGDVGPLGASAVTQIHGLFRWAKSSSRGLLLFVDEAEAFLG---RRSSNQSEHMRQAVNALLFHTGDQA 438
LR++ A+G D A VVL L+TRV I S R+A P+RH+L +GPPGTGKT+VA+R+AR SG+DYAI+SGGDVGPLG+ AVT++H LF WAKSS RG+L+F+DEAEAFLG R ++ SE MR A+NALLFHTG Q+
Sbjct: 407 LRAIFLPKRAKGQDE--LADVVLRETLETRVHEIAKSVRNAILHSAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFHWAKSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLFHTGTQS 553
BLAST of mRNA_M-pyrifera_M_contig117801.3679.1 vs. uniprot
Match: F0Y2W0_AURAN (AAA domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2W0_AURAN) HSP 1 Score: 164 bits (415), Expect = 3.330e-45 Identity = 83/143 (58.04%), Postives = 106/143 (74.13%), Query Frame = 1
Query: 4 RSLVAGGGAEGSDSGRWAGVVLSSDLQTRVDAITSSARSARRLDMPFRHVLFHGPPGTGKTLVARRIARESGLDYAIMSGGDVGPLGASAVTQIHGLFRWAKSSSRGLLLFVDEAEAFLGRRS-SNQSEHMRQAVNALLFHTG 429
R+ A A ++ G GVVL DL+TRV + + R+A+R PFRH+L HGPPGTGKTLVA+R+A+ SGL+YA+MSGGDVGPLGA VT +H LFRWA++S G+L+F+DEAEAFL RS S +EHMR A+NA L+ TG
Sbjct: 250 RAAAARARARAAEDGWLDGVVLPGDLRTRVLQLAVATRNAKRNRAPFRHMLLHGPPGTGKTLVAKRLAKASGLEYALMSGGDVGPLGADGVTALHTLFRWARTSDTGVLIFIDEAEAFLASRSRSKLTEHMRNALNAFLYQTG 392
BLAST of mRNA_M-pyrifera_M_contig117801.3679.1 vs. uniprot
Match: A0A7S1SQA1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SQA1_9CHLO) HSP 1 Score: 155 bits (391), Expect = 6.040e-45 Identity = 73/129 (56.59%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 52 WAGVVLSSDLQTRVDAITSSARSARRLDMPFRHVLFHGPPGTGKTLVARRIARESGLDYAIMSGGDVGPLGASAVTQIHGLFRWAKSSSRGLLLFVDEAEAFLGRRSSNQSEHMRQAVNALLFHTGDQA 438
+A VVL + LQ + + +S + ++ PFRH+LF+GPPGTGK+L A+R+AR SGL YAI+SGGDV PLG AVTQ+H +F WA+++ GLLLF+DEA+AFLGRR N SE +R A+NA+L+ TGDQ+
Sbjct: 64 FADVVLPTKLQDHIAHLAASTTNTKKHGAPFRHMLFYGPPGTGKSLAAKRLARTSGLHYAILSGGDVAPLGGGAVTQLHEIFDWAEATPSGLLLFIDEADAFLGRRGENMSEGLRGALNAMLYRTGDQS 192
BLAST of mRNA_M-pyrifera_M_contig117801.3679.1 vs. uniprot
Match: A0A329SI18_9STRA (AAA domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A329SI18_9STRA) HSP 1 Score: 165 bits (417), Expect = 7.470e-45 Identity = 86/149 (57.72%), Postives = 112/149 (75.17%), Query Frame = 1
Query: 1 LRSLVAGGGAEGSDSGRWAGVVLSSDLQTRVDAITSSARSARRLDMPFRHVLFHGPPGTGKTLVARRIARESGLDYAIMSGGDVGPLGASAVTQIHGLFRWAKSSSRGLLLFVDEAEAFLG---RRSSNQSEHMRQAVNALLFHTGDQA 438
LR+L+ A+G D A VVL S L+TRV I S R+A P+RH+L +GPPGTGKT+VA+R+AR SG+DYAI+SGGDVGPLG+ AVT++H LF+WA +S RG+L+F+DEAEAFLG R ++ SE MR A+NALL+HTG Q+
Sbjct: 412 LRALIRRKPAKGQDE--LADVVLRSSLETRVLEIARSTRNAVLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWANASPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLYHTGTQS 558
BLAST of mRNA_M-pyrifera_M_contig117801.3679.1 vs. uniprot
Match: A0A438EVV7_VITVI (ATPase family AAA domain-containing protein 3 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EVV7_VITVI) HSP 1 Score: 159 bits (401), Expect = 1.330e-44 Identity = 79/145 (54.48%), Postives = 106/145 (73.10%), Query Frame = 1
Query: 7 SLVAGGGAEGSDSGRWAGVVLSSDLQTRVDAITSSARSARRLDMPFRHVLFHGPPGTGKTLVARRIARESGLDYAIMSGGDVGPLGASAVTQIHGLFRWAKSSSRGLLLFVDEAEAFLGRRSSNQ-SEHMRQAVNALLFHTGDQA 438
S AGG G + + ++L LQ R++ + + + + PFR++LF+GPPGTGKT+VAR IAR+SGLDYA+M+GGDV PLGA AVT+IH +F WAK S++GLLLF+DEA+AFL R+S + SE R A+NALLF TGDQ+
Sbjct: 88 STAAGGARPGENKTSFGNIILHPSLQRRIEHLARATSNTKSHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHQIFDWAKKSNKGLLLFIDEADAFLCERNSTRMSEAQRSALNALLFRTGDQS 232
BLAST of mRNA_M-pyrifera_M_contig117801.3679.1 vs. uniprot
Match: A0A250WYZ9_9CHLO (AAA domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WYZ9_9CHLO) HSP 1 Score: 162 bits (411), Expect = 2.260e-44 Identity = 76/126 (60.32%), Postives = 98/126 (77.78%), Query Frame = 1
Query: 61 VVLSSDLQTRVDAITSSARSARRLDMPFRHVLFHGPPGTGKTLVARRIARESGLDYAIMSGGDVGPLGASAVTQIHGLFRWAKSSSRGLLLFVDEAEAFLGRRSSNQSEHMRQAVNALLFHTGDQA 438
++L DL + V + S+A + R+ PFRH+LF+GPPGTGKT+ A+R+AR SG+DYAIMSGGDV PL AVTQ+H LF W++ S +GLLLF+DEA+AFLGRR N SE +R A+NALLF TGDQ+
Sbjct: 323 IILPEDLHSNVRLLASAASNTRKHGAPFRHMLFYGPPGTGKTMAAKRLARTSGMDYAIMSGGDVAPLAGKAVTQLHELFDWSERSRKGLLLFIDEADAFLGRRGDNMSEGLRGALNALLFRTGDQS 448
BLAST of mRNA_M-pyrifera_M_contig117801.3679.1 vs. uniprot
Match: A0A225WZW4_9STRA (AAA domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZW4_9STRA) HSP 1 Score: 163 bits (413), Expect = 2.280e-44 Identity = 81/131 (61.83%), Postives = 103/131 (78.63%), Query Frame = 1
Query: 55 AGVVLSSDLQTRVDAITSSARSARRLDMPFRHVLFHGPPGTGKTLVARRIARESGLDYAIMSGGDVGPLGASAVTQIHGLFRWAKSSSRGLLLFVDEAEAFLG---RRSSNQSEHMRQAVNALLFHTGDQA 438
A VVL S L+TR+ I S R+A P+RH+L +GPPGTGKT+VA+R+AR SG+DYAI+SGGDVGPLG+ AVT++H LF+WA SS RG+L+F+DEAEAFLG R ++ SE MR A+NALLFHTG Q+
Sbjct: 405 ADVVLRSTLETRILEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWANSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLFHTGTQS 535 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117801.3679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117801.3679.1 >prot_M-pyrifera_M_contig117801.3679.1 ID=prot_M-pyrifera_M_contig117801.3679.1|Name=mRNA_M-pyrifera_M_contig117801.3679.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp LRSLVAGGGAEGSDSGRWAGVVLSSDLQTRVDAITSSARSARRLDMPFRHback to top mRNA from alignment at M-pyrifera_M_contig117801:5..521- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117801.3679.1 ID=mRNA_M-pyrifera_M_contig117801.3679.1|Name=mRNA_M-pyrifera_M_contig117801.3679.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=517bp|location=Sequence derived from alignment at M-pyrifera_M_contig117801:5..521- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117801:5..521- >mRNA_M-pyrifera_M_contig117801.3679.1 ID=mRNA_M-pyrifera_M_contig117801.3679.1|Name=mRNA_M-pyrifera_M_contig117801.3679.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig117801:5..521- (Macrocystis pyrifera P11B4 male)back to top |