mRNA_M-pyrifera_M_contig117673.3649.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117673.3649.1 vs. uniprot
Match: A0A2E5M444_9GAMM (Urea ABC transporter ATP-binding protein UrtD n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E5M444_9GAMM) HSP 1 Score: 272 bits (696), Expect = 1.210e-89 Identity = 132/178 (74.16%), Postives = 156/178 (87.64%), Query Frame = 1
Query: 13 KANRRPLLERDVVFDFLIEKPTRDSLVNTTHGNILYLEDISVSFDGFKALNDLTLYVETGELRCIIGPNGAGKTTMMDVITGKTRPDAGTAFYGERLNLLRLSEPEIASLGIGRKFQKPTVFPHHTVFENLELAMAADKRVWPTLVRGITAEERDRLDDVLTMIGLLDHVHALAGILS 546
+ R L++R VF+F E P R+ LVNT G ILYLE+I+VSFDGF+AL+DLTLY+ETGELRC+IGPNGAGKTT+MDVITGKTRPD GTAFYG+R++LLRLSEPEIA+LGIGRKFQKPTVF +HTVF+NLELAMAADKRVWPTLVRG++ EERDR+D+ LT+IGL+D V LAG LS
Sbjct: 7 RRERNSLIDRSRVFEFRSEPPPREELVNTDTGVILYLENITVSFDGFRALDDLTLYIETGELRCLIGPNGAGKTTLMDVITGKTRPDQGTAFYGQRVDLLRLSEPEIATLGIGRKFQKPTVFENHTVFQNLELAMAADKRVWPTLVRGLSGEERDRIDETLTLIGLIDAVGGLAGALS 184
BLAST of mRNA_M-pyrifera_M_contig117673.3649.1 vs. uniprot
Match: A0A381WR78_9ZZZZ (ABC transporter domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381WR78_9ZZZZ) HSP 1 Score: 257 bits (656), Expect = 9.280e-85 Identity = 128/163 (78.53%), Postives = 143/163 (87.73%), Query Frame = 1
Query: 58 FLIEKPTRDSLVNTTHGNILYLEDISVSFDGFKALNDLTLYVETGELRCIIGPNGAGKTTMMDVITGKTRPDAGTAFYGERLNLLRLSEPEIASLGIGRKFQKPTVFPHHTVFENLELAMAADKRVWPTLVRGITAEERDRLDDVLTMIGLLDHVHALAGILS 546
FL KP+RD LVNT G ILYLEDI+VSFDGFKALN+LTLY+ETGELRCIIGPNGAGKTTMMDVITGKTRPD GTAFYG+RL+LLRL+EPEIASLGIGRKFQKPTVF +HTV +NLELAM ADKRVW TL R ++ EERDR+ +VL +IGL + V ALAG LS
Sbjct: 25 FLARKPSRDELVNTDSGYILYLEDITVSFDGFKALNELTLYIETGELRCIIGPNGAGKTTMMDVITGKTRPDFGTAFYGQRLDLLRLTEPEIASLGIGRKFQKPTVFENHTVHDNLELAMEADKRVWATLARRLSGEERDRIAEVLDIIGLKEEVSALAGSLS 187
BLAST of mRNA_M-pyrifera_M_contig117673.3649.1 vs. uniprot
Match: A0A2E6B2F0_9GAMM (Urea ABC transporter ATP-binding protein UrtD n=4 Tax=root TaxID=1 RepID=A0A2E6B2F0_9GAMM) HSP 1 Score: 254 bits (648), Expect = 1.160e-82 Identity = 126/162 (77.78%), Postives = 142/162 (87.65%), Query Frame = 1
Query: 61 LIEKPTRDSLVNTTHGNILYLEDISVSFDGFKALNDLTLYVETGELRCIIGPNGAGKTTMMDVITGKTRPDAGTAFYGERLNLLRLSEPEIASLGIGRKFQKPTVFPHHTVFENLELAMAADKRVWPTLVRGITAEERDRLDDVLTMIGLLDHVHALAGILS 546
+ KP+RD LVNT G ILYLEDI+VSFDGFKALN+LTLY+ETGELRCIIGPNGAGKTTMMDVITGKTRPD GTAFYG+RL+LLRL+EPEIASLGIGRKFQKPTVF +HTV +NLELAM ADKRVW TL R ++ EERDR+ +VL +IGL + V ALAG LS
Sbjct: 1 MARKPSRDELVNTDSGYILYLEDITVSFDGFKALNELTLYIETGELRCIIGPNGAGKTTMMDVITGKTRPDFGTAFYGQRLDLLRLTEPEIASLGIGRKFQKPTVFENHTVHDNLELAMEADKRVWATLARRLSGEERDRIAEVLDIIGLKEEVSALAGSLS 162
BLAST of mRNA_M-pyrifera_M_contig117673.3649.1 vs. uniprot
Match: A0A3C0TBV8_9GAMM (Urea ABC transporter ATP-binding protein UrtD n=3 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0TBV8_9GAMM) HSP 1 Score: 252 bits (644), Expect = 9.220e-82 Identity = 124/180 (68.89%), Postives = 149/180 (82.78%), Query Frame = 1
Query: 7 EAKANRRPLLERDVVFDFLIEKPTRDSLVNTTHGNILYLEDISVSFDGFKALNDLTLYVETGELRCIIGPNGAGKTTMMDVITGKTRPDAGTAFYGERLNLLRLSEPEIASLGIGRKFQKPTVFPHHTVFENLELAMAADKRVWPTLVRGITAEERDRLDDVLTMIGLLDHVHALAGILS 546
+ + NR ++ D VF+FL+E PTR+ L++T G ILYLEDISVSFDGF+ALN+LTLY+ETGELRCIIGPNGAGKTT+MDVITGKTRPD GTA++G+R+NLLR SEPEIAS+GIGRKFQKPTVF HTV ENLELAM +DKRVW TL +T EE+DR+ +VL +IGL + V AG LS
Sbjct: 4 DPRINRPTQVDPDRVFNFLVETPTREELIDTARGVILYLEDISVSFDGFRALNELTLYIETGELRCIIGPNGAGKTTLMDVITGKTRPDWGTAYFGQRVNLLRRSEPEIASMGIGRKFQKPTVFEQHTVHENLELAMESDKRVWTTLFCSLTGEEKDRIGEVLELIGLSELVGKQAGALS 183
BLAST of mRNA_M-pyrifera_M_contig117673.3649.1 vs. uniprot
Match: A0A6L7N0H3_9GAMM (Urea ABC transporter ATP-binding protein UrtD n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7N0H3_9GAMM) HSP 1 Score: 248 bits (632), Expect = 1.220e-79 Identity = 123/182 (67.58%), Postives = 150/182 (82.42%), Query Frame = 1
Query: 13 KANRRPLLERDVVFDFLIEKPTRDSLVNTTHGNILYLEDISVSFDGFKALNDLTLYVETGELRCIIGPNGAGKTTMMDVITGKTRPDAGTAFYGERLNLLRLSEPEIASLGIGRKFQKPTVFPHHTVFENLELAMAADKRVWPTLVRGITAEERDRLDDVLTMIGLLDHV----HALAGILS 546
+A R LER+ V+DFLIE+P+R LV+T HG ILY+E+++VSFDGFKAL++LTLY+ETGEL CIIGPNGAGKTTMMDVITGKTRPD G+ FYG+RL+L RL E EIA+LGIGRKFQKPTVF HT ++NLELAMAADKRVWPTL+R ++ EER R+++VL+ +GL H LAG LS
Sbjct: 18 EARRAQFLERERVWDFLIERPSRAELVDTDHGYILYIEELTVSFDGFKALDNLTLYIETGELHCIIGPNGAGKTTMMDVITGKTRPDYGSVFYGQRLDLTRLPEAEIATLGIGRKFQKPTVFESHTPYQNLELAMAADKRVWPTLLRRLSGEERGRIEEVLSTVGLGAHAARGADTLAGALS 199
BLAST of mRNA_M-pyrifera_M_contig117673.3649.1 vs. uniprot
Match: A0A558CUL8_9GAMM (Urea ABC transporter ATP-binding protein UrtD n=2 Tax=Sedimenticola TaxID=349742 RepID=A0A558CUL8_9GAMM) HSP 1 Score: 243 bits (619), Expect = 5.040e-78 Identity = 116/176 (65.91%), Postives = 143/176 (81.25%), Query Frame = 1
Query: 19 NRRPLLERDVVFDFLIEKPTRDSLVNTTHGNILYLEDISVSFDGFKALNDLTLYVETGELRCIIGPNGAGKTTMMDVITGKTRPDAGTAFYGERLNLLRLSEPEIASLGIGRKFQKPTVFPHHTVFENLELAMAADKRVWPTLVRGITAEERDRLDDVLTMIGLLDHVHALAGILS 546
N R ++ RD VFDF+++ T V+ +HG ILYLEDISVSFDGFKA+NDL LY++ GELRCIIGPNGAGKTTMMD+ITGKTRPD G+AF+G+ +NL++LSEPEIA GIGRKFQKPTVF HTVFENLEL+MA DKR+WPTL + +RD++D+VLT+I L +H + AG LS
Sbjct: 6 NLREVMRRDRVFDFMLQ--TTGLEVDLSHGTILYLEDISVSFDGFKAINDLNLYIDAGELRCIIGPNGAGKTTMMDIITGKTRPDKGSAFFGQNINLMQLSEPEIAQAGIGRKFQKPTVFESHTVFENLELSMAGDKRIWPTLTAQLNGTQRDKIDEVLTIIALQEHRNLYAGALS 179
BLAST of mRNA_M-pyrifera_M_contig117673.3649.1 vs. uniprot
Match: A0A382DMV2_9ZZZZ (ABC transporter domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382DMV2_9ZZZZ) HSP 1 Score: 241 bits (616), Expect = 9.490e-78 Identity = 120/166 (72.29%), Postives = 139/166 (83.73%), Query Frame = 1
Query: 49 VFDFLIEKPTRDSLVNTTHGNILYLEDISVSFDGFKALNDLTLYVETGELRCIIGPNGAGKTTMMDVITGKTRPDAGTAFYGERLNLLRLSEPEIASLGIGRKFQKPTVFPHHTVFENLELAMAADKRVWPTLVRGITAEERDRLDDVLTMIGLLDHVHALAGILS 546
V +FLIE P RD L+NT G ILYLEDI+VSFDGF+ALN+LTLY+E GELRCIIGPNGAGKTT+MDVITGKTR D G AF+G+R++L RLSEPEIA+LGIGRKFQKPTVF HTVFENLELAM ADKRVW TL + E+ DR+D+VL++IGL D VH AG L+
Sbjct: 1 VANFLIESPARDELINTKTGVILYLEDITVSFDGFRALNELTLYIEAGELRCIIGPNGAGKTTLMDVITGKTRADHGRAFFGQRVDLQRLSEPEIATLGIGRKFQKPTVFELHTVFENLELAMHADKRVWSTLWAQLDGEQLDRIDEVLSLIGLKDQVHLEAGALA 166
BLAST of mRNA_M-pyrifera_M_contig117673.3649.1 vs. uniprot
Match: A0A357I8M1_9GAMM (Urea ABC transporter ATP-binding protein UrtD n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A357I8M1_9GAMM) HSP 1 Score: 242 bits (617), Expect = 1.050e-77 Identity = 119/175 (68.00%), Postives = 143/175 (81.71%), Query Frame = 1
Query: 25 RPLLERDVVFDFLIEK-PTRDSLVNTTHGNILYLEDISVSFDGFKALNDLTLYVETGELRCIIGPNGAGKTTMMDVITGKTRPDAGTAFYGERLNLLRLSEPEIASLGIGRKFQKPTVFPHHTVFENLELAMAADKRVWPTLVRGITAEERDRLDDVLTMIGLLDHVHALAGILS 546
R ++RD VF+FL K RD ++ THG ILYLED+SVSFDGFKA+NDL LY++ GELRCIIGPNGAGKTTMMD+ITGKTRPD G+ F+G+R++LL+LSEPEIAS GIGRKFQKPTVF +HTVFENLELAM DKRVWPTL ++ E++D +D+ LT IGL +H A AG LS
Sbjct: 8 RRSVDRDEVFEFLRPKINVRD--LDLTHGTILYLEDVSVSFDGFKAINDLNLYIDAGELRCIIGPNGAGKTTMMDIITGKTRPDTGSVFFGQRIDLLKLSEPEIASNGIGRKFQKPTVFEYHTVFENLELAMEGDKRVWPTLRATLSGEDKDHIDETLTTIGLQEHAQAYAGALS 180
BLAST of mRNA_M-pyrifera_M_contig117673.3649.1 vs. uniprot
Match: A0A0B0H2N8_SOVGS (ABC-type urea transporter UrtABCDE, subunit D n=4 Tax=Solemya velum gill symbiont TaxID=2340 RepID=A0A0B0H2N8_SOVGS) HSP 1 Score: 237 bits (605), Expect = 6.090e-76 Identity = 114/173 (65.90%), Postives = 142/173 (82.08%), Query Frame = 1
Query: 28 PLLERDVVFDFLIEKPTRDSLVNTTHGNILYLEDISVSFDGFKALNDLTLYVETGELRCIIGPNGAGKTTMMDVITGKTRPDAGTAFYGERLNLLRLSEPEIASLGIGRKFQKPTVFPHHTVFENLELAMAADKRVWPTLVRGITAEERDRLDDVLTMIGLLDHVHALAGILS 546
P +ERD V+ F+ P D ++T+HG ILYLED++VSFDGFKA+NDLTLY+ETGELRCIIGPNGAGKTTMMD+ITGKT PD+G A++G++++LL+LSEPEIA GIGRKFQKPTVF HTVFENLELA+ +DKRVWPTL ++ E+RD +++ L +IGL D LAG LS
Sbjct: 6 PFMERDQVWSFMTPPPVLD--LDTSHGPILYLEDLNVSFDGFKAINDLTLYIETGELRCIIGPNGAGKTTMMDIITGKTTPDSGQAWFGQKIDLLKLSEPEIAEAGIGRKFQKPTVFEFHTVFENLELAIKSDKRVWPTLFADLSGEQRDHIEEALEIIGLQDLSKQLAGSLS 176
BLAST of mRNA_M-pyrifera_M_contig117673.3649.1 vs. uniprot
Match: A0A0F7JUT5_9GAMM (Urea ABC transporter ATP-binding protein n=1 Tax=Sedimenticola thiotaurini TaxID=1543721 RepID=A0A0F7JUT5_9GAMM) HSP 1 Score: 236 bits (603), Expect = 1.350e-75 Identity = 116/176 (65.91%), Postives = 142/176 (80.68%), Query Frame = 1
Query: 19 NRRPLLERDVVFDFLIEKPTRDSLVNTTHGNILYLEDISVSFDGFKALNDLTLYVETGELRCIIGPNGAGKTTMMDVITGKTRPDAGTAFYGERLNLLRLSEPEIASLGIGRKFQKPTVFPHHTVFENLELAMAADKRVWPTLVRGITAEERDRLDDVLTMIGLLDHVHALAGILS 546
N R + D VFDF+++ TR V+ +HGNILYLEDISVSFDGFKA+NDL LY+E GELRCIIGPNGAGKTTMMD+ITGKTRPD G+A++G+ ++LL LSEPEI+ +GIGRKFQKPTVF +H+VFENLEL+MA DKRVW L ++AE+RD +D+VL +IGL LAG LS
Sbjct: 6 NLRETMRPDRVFDFMLQ--TRGLEVDISHGNILYLEDISVSFDGFKAINDLNLYIEAGELRCIIGPNGAGKTTMMDIITGKTRPDRGSAYFGQNIDLLHLSEPEISQVGIGRKFQKPTVFEYHSVFENLELSMAGDKRVWAILTARLSAEQRDFIDEVLEIIGLQAEARQLAGSLS 179 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117673.3649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117673.3649.1 >prot_M-pyrifera_M_contig117673.3649.1 ID=prot_M-pyrifera_M_contig117673.3649.1|Name=mRNA_M-pyrifera_M_contig117673.3649.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp MAEAKANRRPLLERDVVFDFLIEKPTRDSLVNTTHGNILYLEDISVSFDGback to top mRNA from alignment at M-pyrifera_M_contig117673:1..546- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117673.3649.1 ID=mRNA_M-pyrifera_M_contig117673.3649.1|Name=mRNA_M-pyrifera_M_contig117673.3649.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig117673:1..546- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117673:1..546- >mRNA_M-pyrifera_M_contig117673.3649.1 ID=mRNA_M-pyrifera_M_contig117673.3649.1|Name=mRNA_M-pyrifera_M_contig117673.3649.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig117673:1..546- (Macrocystis pyrifera P11B4 male)back to top |