prot_M-pyrifera_M_contig117510.3625.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117510.3625.1
Unique Nameprot_M-pyrifera_M_contig117510.3625.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length184
Homology
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BLAST of mRNA_M-pyrifera_M_contig117510.3625.1 vs. uniprot
Match: V4LCH3_9GAMM (Integrase catalytic domain-containing protein n=1 Tax=Thiohalocapsa sp. PB-PSB1 TaxID=1385625 RepID=V4LCH3_9GAMM)

HSP 1 Score: 322 bits (826), Expect = 1.790e-109
Identity = 151/184 (82.07%), Postives = 169/184 (91.85%), Query Frame = 0 
Query:    1 RSTFYHVPEPVSEAELALMKLIDQCHLKHPYFGSRRVRDWLEDRGHRVNRKRVRRLMRTMGLVAVYPKRNLSLANQAHKVYPYLLRDLTINRPNQVWATDITFVPMARGFVYLVAIMDWYSRRVLSWRVSNTLDTSFCIDALNEAIERHGVPEIFNTDQGSQFTSDAFTGVLKHHEIQISMDGK 184
            RSTFYHVP+PVS+ EL LM L+D+CHLKHP++GSRR+RDWLEDRGH+VNRK+VRRLMRTMGL A YPKRNLSLANQAHKVYPYLLR+  I+RPNQVWATDITF+PMARGFVYLVAIMDWYSR+VLSWRVSNTLD SFC+DAL EA++++G PEIFNTDQGSQFTS  FTGVLK   IQISMDGK
Sbjct:   21 RSTFYHVPKPVSDEELELMALMDRCHLKHPFYGSRRIRDWLEDRGHQVNRKKVRRLMRTMGLTAQYPKRNLSLANQAHKVYPYLLRNRVIDRPNQVWATDITFIPMARGFVYLVAIMDWYSRKVLSWRVSNTLDASFCVDALEEALDQYGTPEIFNTDQGSQFTSVDFTGVLKREGIQISMDGK 204
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BLAST of mRNA_M-pyrifera_M_contig117510.3625.1 vs. uniprot
Match: A0A2E7C025_9GAMM (Integrase catalytic domain-containing protein n=2 Tax=Haliea TaxID=475794 RepID=A0A2E7C025_9GAMM)

HSP 1 Score: 326 bits (835), Expect = 2.210e-109
Identity = 153/184 (83.15%), Postives = 168/184 (91.30%), Query Frame = 0 
Query:    1 RSTFYHVPEPVSEAELALMKLIDQCHLKHPYFGSRRVRDWLEDRGHRVNRKRVRRLMRTMGLVAVYPKRNLSLANQAHKVYPYLLRDLTINRPNQVWATDITFVPMARGFVYLVAIMDWYSRRVLSWRVSNTLDTSFCIDALNEAIERHGVPEIFNTDQGSQFTSDAFTGVLKHHEIQISMDGK 184
            RSTFYHVP+PVS+ EL LMKLID+CHL +P+ GSRR+RDWLED GH VNRK+V+RLMRTMGLVA+YPKRNLSLAN AHKVYPYLL+DL I+RPNQ WATDIT++PMARGFVYLVAIMDWYSRRVLSWRVSNTLD SFC+DAL EAIERHG PEIFNTDQGSQFTSD FT VLK H I+ISMDGK
Sbjct:  122 RSTFYHVPKPVSDEELVLMKLIDRCHLDYPFLGSRRIRDWLEDEGHCVNRKKVQRLMRTMGLVAIYPKRNLSLANHAHKVYPYLLKDLVIDRPNQAWATDITYIPMARGFVYLVAIMDWYSRRVLSWRVSNTLDASFCVDALEEAIERHGPPEIFNTDQGSQFTSDDFTDVLKQHGIRISMDGK 305
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BLAST of mRNA_M-pyrifera_M_contig117510.3625.1 vs. uniprot
Match: A0A2E7KF05_9PLAN (Integrase n=2 Tax=Bacteria TaxID=2 RepID=A0A2E7KF05_9PLAN)

HSP 1 Score: 325 bits (834), Expect = 3.140e-109
Identity = 153/184 (83.15%), Postives = 168/184 (91.30%), Query Frame = 0 
Query:    1 RSTFYHVPEPVSEAELALMKLIDQCHLKHPYFGSRRVRDWLEDRGHRVNRKRVRRLMRTMGLVAVYPKRNLSLANQAHKVYPYLLRDLTINRPNQVWATDITFVPMARGFVYLVAIMDWYSRRVLSWRVSNTLDTSFCIDALNEAIERHGVPEIFNTDQGSQFTSDAFTGVLKHHEIQISMDGK 184
            RSTFYH P+PVS+ EL LM LID+CHLKHP++GSRR+RDWLEDRGHRVNRKRV+RLMRTMGLV  YPKRNLSLA+QAHKVYPY LR+L INRPNQVWATDIT++PMARGFVYL AIMDW+SR+VLSWRVSNTLD SFCIDAL EAIE +G PEIFNTDQGSQFTS+ FTGVLK H IQISMDGK
Sbjct:  122 RSTFYHAPKPVSDEELGLMALIDRCHLKHPFYGSRRIRDWLEDRGHRVNRKRVQRLMRTMGLVVQYPKRNLSLADQAHKVYPYRLRNLVINRPNQVWATDITYIPMARGFVYLAAIMDWHSRKVLSWRVSNTLDASFCIDALEEAIETYGAPEIFNTDQGSQFTSEDFTGVLKRHGIQISMDGK 305
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BLAST of mRNA_M-pyrifera_M_contig117510.3625.1 vs. uniprot
Match: A0A2E7C032_9GAMM (Integrase n=5 Tax=Halieaceae TaxID=1706372 RepID=A0A2E7C032_9GAMM)

HSP 1 Score: 324 bits (830), Expect = 1.270e-108
Identity = 151/184 (82.07%), Postives = 169/184 (91.85%), Query Frame = 0 
Query:    1 RSTFYHVPEPVSEAELALMKLIDQCHLKHPYFGSRRVRDWLEDRGHRVNRKRVRRLMRTMGLVAVYPKRNLSLANQAHKVYPYLLRDLTINRPNQVWATDITFVPMARGFVYLVAIMDWYSRRVLSWRVSNTLDTSFCIDALNEAIERHGVPEIFNTDQGSQFTSDAFTGVLKHHEIQISMDGK 184
            RSTFYHVPEPVS+ EL LM LID+CHL++P++GSRR+RDWLED+GH VNRKR++RLMRTM LVA YPKRNLSLANQAHKVYPYLLRDL I+RPNQVWATD+T++PMARGFVYLVAIMDWYSRRVLSWRVSNTLD SFC+DAL EAIE HG PEIFNTDQGSQFTS+ FTGVLK   ++ISMDGK
Sbjct:  122 RSTFYHVPEPVSDEELELMALIDRCHLQYPFYGSRRIRDWLEDQGHVVNRKRIQRLMRTMDLVAQYPKRNLSLANQAHKVYPYLLRDLVIDRPNQVWATDVTYIPMARGFVYLVAIMDWYSRRVLSWRVSNTLDASFCVDALEEAIENHGTPEIFNTDQGSQFTSEDFTGVLKREGVRISMDGK 305
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BLAST of mRNA_M-pyrifera_M_contig117510.3625.1 vs. uniprot
Match: A0A1D8IMX2_9GAMM (Integrase n=3 Tax=Acidihalobacter yilgarnensis TaxID=2819280 RepID=A0A1D8IMX2_9GAMM)

HSP 1 Score: 316 bits (810), Expect = 4.870e-107
Identity = 148/184 (80.43%), Postives = 168/184 (91.30%), Query Frame = 0 
Query:    1 RSTFYHVPEPVSEAELALMKLIDQCHLKHPYFGSRRVRDWLEDRGHRVNRKRVRRLMRTMGLVAVYPKRNLSLANQAHKVYPYLLRDLTINRPNQVWATDITFVPMARGFVYLVAIMDWYSRRVLSWRVSNTLDTSFCIDALNEAIERHGVPEIFNTDQGSQFTSDAFTGVLKHHEIQISMDGK 184
            RSTFY V +PV++ EL LM LID+CHLK+P++GSRR+ DWLED+GHRVNRKRV+RLMRTM L A YPKRNLSLANQAHKVYPYLLRD  I+RPNQVWATD+T++PMARGFVYLVAIMDW+SR+VLSWRVSNTLD SFC+DAL EAIE +G PEIFNTDQGSQFTS+AFTGVLKHH I+ISMDGK
Sbjct:   21 RSTFYRVAKPVTDEELELMALIDRCHLKYPFYGSRRIHDWLEDQGHRVNRKRVQRLMRTMDLRAQYPKRNLSLANQAHKVYPYLLRDRVIDRPNQVWATDVTYIPMARGFVYLVAIMDWHSRKVLSWRVSNTLDVSFCVDALEEAIEAYGAPEIFNTDQGSQFTSEAFTGVLKHHGIRISMDGK 204
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BLAST of mRNA_M-pyrifera_M_contig117510.3625.1 vs. uniprot
Match: A0A2E7ZRN8_9DELT (Integrase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2E7ZRN8_9DELT)

HSP 1 Score: 300 bits (769), Expect = 2.260e-99
Identity = 136/184 (73.91%), Postives = 166/184 (90.22%), Query Frame = 0 
Query:    1 RSTFYHVPEPVSEAELALMKLIDQCHLKHPYFGSRRVRDWLEDRGHRVNRKRVRRLMRTMGLVAVYPKRNLSLANQAHKVYPYLLRDLTINRPNQVWATDITFVPMARGFVYLVAIMDWYSRRVLSWRVSNTLDTSFCIDALNEAIERHGVPEIFNTDQGSQFTSDAFTGVLKHHEIQISMDGK 184
            RSTFYHVP+PVS+ +L LM+L+D+CH + P++GSRR++DWLED G  +NRKR++RLMRTMG+VAVYPK+ LS  N AH+VYPYLLR+LTI+RPNQVWA DIT++PMARGFVYLVAIMDW+SR+VLSWR+SNT+D+SFC+DALNEAI+R+G PEIFNTDQGSQFTSD FT VL  HEI ISMDG+
Sbjct:  122 RSTFYHVPQPVSDEDLELMQLMDRCHTELPFYGSRRIKDWLEDEGQSINRKRIQRLMRTMGIVAVYPKQKLSQPNPAHRVYPYLLRNLTIDRPNQVWAADITYLPMARGFVYLVAIMDWHSRKVLSWRLSNTMDSSFCVDALNEAIDRYGTPEIFNTDQGSQFTSDDFTQVLNEHEIAISMDGR 305
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BLAST of mRNA_M-pyrifera_M_contig117510.3625.1 vs. uniprot
Match: A0A139DES8_9GAMM (Putative transposase n=1 Tax=Marinobacter sp. T13-3 TaxID=1794906 RepID=A0A139DES8_9GAMM)

HSP 1 Score: 270 bits (691), Expect = 7.080e-89
Identity = 125/184 (67.93%), Postives = 156/184 (84.78%), Query Frame = 0 
Query:    1 RSTFYHVPEPVSEAELALMKLIDQCHLKHPYFGSRRVRDWLEDRGHRVNRKRVRRLMRTMGLVAVYPKRNLSLANQAHKVYPYLLRDLTINRPNQVWATDITFVPMARGFVYLVAIMDWYSRRVLSWRVSNTLDTSFCIDALNEAIERHGVPEIFNTDQGSQFTSDAFTGVLKHHEIQISMDGK 184
            RS+ Y+VP    + +L LM LIDQ HL+ PY+GSR++R  LE +GHR+NRKRV+RLMRTMG+ AVYP+  +S+    HKVYPYLL+ L ++RPNQVWATDI++VP+ARGF+YLVAI+DWYSR+VLSWRVSNT+DT FC+DAL EA++RHG PEIFNTDQG+QFTS+ FTGVLK H I+ISMDGK
Sbjct:   22 RSSVYYVPREQCQEDLNLMYLIDQQHLETPYYGSRKMRVHLERQGHRINRKRVQRLMRTMGIQAVYPQPRISIPGDGHKVYPYLLKGLKVDRPNQVWATDISYVPLARGFMYLVAIIDWYSRKVLSWRVSNTMDTDFCVDALEEALQRHGTPEIFNTDQGTQFTSEVFTGVLKAHGIRISMDGK 205
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BLAST of mRNA_M-pyrifera_M_contig117510.3625.1 vs. uniprot
Match: UPI0010FDE644 (IS3 family transposase n=1 Tax=Mariprofundus erugo TaxID=2528639 RepID=UPI0010FDE644)

HSP 1 Score: 273 bits (699), Expect = 9.580e-89
Identity = 125/184 (67.93%), Postives = 156/184 (84.78%), Query Frame = 0 
Query:    1 RSTFYHVPEPVSEAELALMKLIDQCHLKHPYFGSRRVRDWLEDRGHRVNRKRVRRLMRTMGLVAVYPKRNLSLANQAHKVYPYLLRDLTINRPNQVWATDITFVPMARGFVYLVAIMDWYSRRVLSWRVSNTLDTSFCIDALNEAIERHGVPEIFNTDQGSQFTSDAFTGVLKHHEIQISMDGK 184
            RS FY+ P PVS  +L LM+L+D+ HLK+P++GSRR+R WLED GH ++RK+V RLM  MG+V +YPK+N S  N+AHKVYPYLLR L INRPNQVW TDI+++PMA+GF+YLVAIMDW+SR+VLSWR+SNT+D  FC++AL+EAI R G PEIFN+DQG QFTS+AFTG LK H+IQISMDGK
Sbjct:  123 RSGFYYQPVPVSAQDLELMRLLDEGHLKYPFYGSRRLRGWLEDNGHFLSRKKVTRLMHKMGIVPIYPKKNTSKRNKAHKVYPYLLRGLEINRPNQVWCTDISYIPMAKGFLYLVAIMDWHSRKVLSWRLSNTMDVHFCLEALDEAIARFGTPEIFNSDQGCQFTSEAFTGRLKKHDIQISMDGK 306
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BLAST of mRNA_M-pyrifera_M_contig117510.3625.1 vs. uniprot
Match: A0A1J5JFQ9_9PROT (Integrase catalytic domain-containing protein n=1 Tax=Zetaproteobacteria bacterium CG2_30_59_37 TaxID=1805430 RepID=A0A1J5JFQ9_9PROT)

HSP 1 Score: 269 bits (688), Expect = 1.770e-88
Identity = 122/184 (66.30%), Postives = 154/184 (83.70%), Query Frame = 0 
Query:    1 RSTFYHVPEPVSEAELALMKLIDQCHLKHPYFGSRRVRDWLEDRGHRVNRKRVRRLMRTMGLVAVYPKRNLSLANQAHKVYPYLLRDLTINRPNQVWATDITFVPMARGFVYLVAIMDWYSRRVLSWRVSNTLDTSFCIDALNEAIERHGVPEIFNTDQGSQFTSDAFTGVLKHHEIQISMDGK 184
            RS FY+   P+S  EL LM+L+D+ HLK+P++GSR +R WL D GH ++RK+V RLMR MG+V +YPK+N S AN+ HKVYPYLLR + I+RPNQVW TDIT++PMARGF+YLVAIMDW+SR+VLSWR+SNT+D  FC++AL+EA+ R G PEIFN+DQGSQFTS+AFTG LK H I+ISMDGK
Sbjct:   21 RSGFYYQAAPISAEELELMRLLDEGHLKYPFYGSRCLRGWLSDHGHELSRKKVVRLMRKMGIVPIYPKKNTSKANRQHKVYPYLLRGMAIDRPNQVWCTDITYIPMARGFLYLVAIMDWHSRKVLSWRLSNTMDAHFCLEALDEAVTRFGTPEIFNSDQGSQFTSEAFTGALKQHGIRISMDGK 204
[Close]
BLAST of mRNA_M-pyrifera_M_contig117510.3625.1 vs. uniprot
Match: W8KR09_9GAMM (Integrase n=4 Tax=Ectothiorhodospira TaxID=1051 RepID=W8KR09_9GAMM)

HSP 1 Score: 269 bits (687), Expect = 2.520e-88
Identity = 127/184 (69.02%), Postives = 154/184 (83.70%), Query Frame = 0 
Query:    1 RSTFYHVPEPVSEAELALMKLIDQCHLKHPYFGSRRVRDWLEDRGHRVNRKRVRRLMRTMGLVAVYPKRNLSLANQAHKVYPYLLRDLTINRPNQVWATDITFVPMARGFVYLVAIMDWYSRRVLSWRVSNTLDTSFCIDALNEAIERHGVPEIFNTDQGSQFTSDAFTGVLKHHEIQISMDGK 184
            RS+ Y+ P+P  +++L LM+LID+ +L+ P++GSRR+R +L   GH VNRKRV+RLMR MGL AVYP+   S   + H++YPYLLRDL I+RPNQVWATD+TF+PMARGF+YLVAIMDW+SRRVLSWRVSNTLDT FCIDAL EA+ RHG PEIFNTDQG QFTS AFT VL+ H+IQISMDGK
Sbjct:   22 RSSVYYRPKPAQDSDLELMRLIDEEYLRRPFYGSRRMRAYLNRLGHPVNRKRVQRLMRQMGLHAVYPRPRTSRPGEGHRIYPYLLRDLVIDRPNQVWATDVTFIPMARGFMYLVAIMDWHSRRVLSWRVSNTLDTDFCIDALEEALTRHGRPEIFNTDQGCQFTSKAFTQVLEDHKIQISMDGK 205
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117510.3625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
V4LCH3_9GAMM1.790e-10982.07Integrase catalytic domain-containing protein n=1 ... [more]
A0A2E7C025_9GAMM2.210e-10983.15Integrase catalytic domain-containing protein n=2 ... [more]
A0A2E7KF05_9PLAN3.140e-10983.15Integrase n=2 Tax=Bacteria TaxID=2 RepID=A0A2E7KF0... [more]
A0A2E7C032_9GAMM1.270e-10882.07Integrase n=5 Tax=Halieaceae TaxID=1706372 RepID=A... [more]
A0A1D8IMX2_9GAMM4.870e-10780.43Integrase n=3 Tax=Acidihalobacter yilgarnensis Tax... [more]
A0A2E7ZRN8_9DELT2.260e-9973.91Integrase n=2 Tax=Proteobacteria TaxID=1224 RepID=... [more]
A0A139DES8_9GAMM7.080e-8967.93Putative transposase n=1 Tax=Marinobacter sp. T13-... [more]
UPI0010FDE6449.580e-8967.93IS3 family transposase n=1 Tax=Mariprofundus erugo... [more]
A0A1J5JFQ9_9PROT1.770e-8866.30Integrase catalytic domain-containing protein n=1 ... [more]
W8KR09_9GAMM2.520e-8869.02Integrase n=4 Tax=Ectothiorhodospira TaxID=1051 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 91..181
e-value: 5.2E-22
score: 78.3
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 89..184
score: 15.806
IPR025948HTH-like domainPFAMPF13276HTH_21coord: 14..69
e-value: 1.1E-17
score: 63.9
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 79..182
e-value: 1.4E-18
score: 69.4
IPR038965Transposase InsF-likePANTHERPTHR42648FAMILY NOT NAMEDcoord: 20..183
NoneNo IPR availablePANTHERPTHR42648:SF5TRANSPOSASE INSF FOR INSERTION SEQUENCE IS3A-RELATEDcoord: 20..183
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 91..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117510contigM-pyrifera_M_contig117510:3..554 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117510.3625.1mRNA_M-pyrifera_M_contig117510.3625.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117510 3..554 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117510.3625.1 ID=prot_M-pyrifera_M_contig117510.3625.1|Name=mRNA_M-pyrifera_M_contig117510.3625.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp
RSTFYHVPEPVSEAELALMKLIDQCHLKHPYFGSRRVRDWLEDRGHRVNR
KRVRRLMRTMGLVAVYPKRNLSLANQAHKVYPYLLRDLTINRPNQVWATD
ITFVPMARGFVYLVAIMDWYSRRVLSWRVSNTLDTSFCIDALNEAIERHG
VPEIFNTDQGSQFTSDAFTGVLKHHEIQISMDGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR025948HTH-like_dom
IPR036397RNaseH_sf
IPR038965InsF-like
IPR012337RNaseH-like_sf