prot_M-pyrifera_M_contig11729.3576.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11729.3576.1
Unique Nameprot_M-pyrifera_M_contig11729.3576.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length108
Homology
BLAST of mRNA_M-pyrifera_M_contig11729.3576.1 vs. uniprot
Match: D7G867_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G867_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 6.270e-50
Identity = 87/108 (80.56%), Postives = 90/108 (83.33%), Query Frame = 0
Query:    1 HLDDAEIKVGTVEGMCPLEEMSRRVPGDLHILEKEHPALLMPADGRSGGAPPRPWSNNDLVVKRHQRAAAGMDISKPELLRTPQWLARTVDHLVANCMDKGPQGGGDP 108
            HLDDA+IK GTVE MCP EEMSRRVPGDLHILEKEHP   MP  G   G PPR W ++DLVVKRHQRAAAGMDISKPELLRTP WLARTVDHLV  CMDKGP GGGDP
Sbjct:  247 HLDDAKIKQGTVEAMCPPEEMSRRVPGDLHILEKEHPDFFMPDLG--DGGPPRLWLHDDLVVKRHQRAAAGMDISKPELLRTPLWLARTVDHLVMICMDKGPHGGGDP 352          
BLAST of mRNA_M-pyrifera_M_contig11729.3576.1 vs. uniprot
Match: A0A5J4Z7I1_PORPP (Germinal-center associated nuclear protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7I1_PORPP)

HSP 1 Score: 61.2 bits (147), Expect = 1.220e-8
Identity = 36/101 (35.64%), Postives = 57/101 (56.44%), Query Frame = 0
Query:    2 LDDAEIKVGTVEGMCPLEE-MSRRVPGDLHILEKEHPALLMPADGRSGGAPPRPWSNNDLVVKRHQRAAAGMDISKPELLRTPQWLARTVDHLVANCMDKG 101
            L+ +E  VGT   MCP +E + R+   DL I E      ++P  G +G A      ++   VK++ R+AA  + ++PE +R PQ L RT+D+L+   +DKG
Sbjct:  476 LEQSECLVGTCLDMCPAKERIDRQEQRDLSIFE------ILPGTGANGEAS---LVDHAHAVKKYARSAAASEAARPEQIRPPQVLVRTMDYLIDEILDKG 567          
BLAST of mRNA_M-pyrifera_M_contig11729.3576.1 vs. uniprot
Match: A0A2R5GTD9_9STRA (SAC3 family protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTD9_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.270e-8
Identity = 36/101 (35.64%), Postives = 53/101 (52.48%), Query Frame = 0
Query:    9 VGTVEGMCPLEEMSRRV-PGDLHILEKEHPALLMPADGRSGGAPPRPWSNNDLVVKRHQRAAAGMDISKPELLRTPQWLARTVDHLVANCMDKGPQGGGDP 108
            VG    MCP  E  RR     LH+LE++HP +            P   S  +L VK   R++AGM +  P+++R    LART+D+L  + +D+ P+ G DP
Sbjct:  792 VGECMKMCPKSETDRRYHENSLHLLERQHPEM------------PELPSKYELTVKSFMRSSAGMVLDIPDIVRPESVLARTIDYLWDDILDR-PERGADP 879          
BLAST of mRNA_M-pyrifera_M_contig11729.3576.1 vs. uniprot
Match: A0A2V3J181_9FLOR (Germinal-center associated nuclear protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J181_9FLOR)

HSP 1 Score: 53.5 bits (127), Expect = 6.140e-6
Identity = 35/102 (34.31%), Postives = 51/102 (50.00%), Query Frame = 0
Query:    2 LDDAEIKVGTVEGMCPLEEMSRRVPG-DLHILEKEHPALLMPADGRSGGAPPRPWSNNDLV--VKRHQRAAAGMDISKPELLRTPQWLARTVDHLVANCMDK 100
            + DA+  +GT + MCPL+E   R+   D+ + E +                  P S  DL   VK+++R+AA  +  KPE +R P  LART+DHL   C  K
Sbjct:  560 IQDAKQLIGTCQEMCPLDEFESRIAQRDVSLFELKQ----------------GPGSEPDLTKAVKKYRRSAAISEEQKPEEVRPPPVLARTMDHLKKVCDSK 645          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11729.3576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G867_ECTSI6.270e-5080.56PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A5J4Z7I1_PORPP1.220e-835.64Germinal-center associated nuclear protein n=1 Tax... [more]
A0A2R5GTD9_9STRA2.270e-835.64SAC3 family protein 1 n=1 Tax=Hondaea fermentalgia... [more]
A0A2V3J181_9FLOR6.140e-634.31Germinal-center associated nuclear protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005062SAC3/GANP/THP3PFAMPF03399SAC3_GANPcoord: 10..100
e-value: 1.8E-12
score: 47.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11729contigM-pyrifera_M_contig11729:9092..9415 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11729.3576.1mRNA_M-pyrifera_M_contig11729.3576.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11729 9092..9415 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11729.3576.1 ID=prot_M-pyrifera_M_contig11729.3576.1|Name=mRNA_M-pyrifera_M_contig11729.3576.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
HLDDAEIKVGTVEGMCPLEEMSRRVPGDLHILEKEHPALLMPADGRSGGA
PPRPWSNNDLVVKRHQRAAAGMDISKPELLRTPQWLARTVDHLVANCMDK
GPQGGGDP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005062SAC3/GANP/THP3