mRNA_M-pyrifera_M_contig117127.3542.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig117127.3542.1
Unique NamemRNA_M-pyrifera_M_contig117127.3542.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig117127.3542.1 vs. uniprot
Match: A0A3B9CZI5_9PLAN (DUF1501 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B9CZI5_9PLAN)

HSP 1 Score: 277 bits (709), Expect = 9.090e-90
Identity = 131/158 (82.91%), Postives = 146/158 (92.41%), Query Frame = 1 
Query:    1 ALLSRRLIEAGVRFVSLNTGYWDDHGNIKRALDNKLPRHDRAVGVLIQDMADRGMLDDTLVITAGEFGRTPRINKNAGRDHWPQAQSILLTGGGFQHGQVIGSTNDKAEHPTSRKIGVEDFCAIVYHALGLKADDIVIDRSDRPVHLLPGGQVPHELL 474
            ALL+RRLIEAGVR+VSLNTGY+DDHGNI+RAL +KLPRHD+AVGVLIQD+ADRGMLDDTLVI AGEFG TPRIN NAGRDHWPQAQSILL GGG++HGQVIG+TN+KAEHP SRKIGVEDFCA VYH+LGL+ DD VID S RPVHL+PGGQVP EL+
Sbjct:  292 ALLARRLIEAGVRYVSLNTGYFDDHGNIERALRDKLPRHDKAVGVLIQDLADRGMLDDTLVIVAGEFGHTPRINANAGRDHWPQAQSILLAGGGYKHGQVIGATNEKAEHPVSRKIGVEDFCATVYHSLGLRIDDEVIDMSGRPVHLVPGGQVPRELI 449
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BLAST of mRNA_M-pyrifera_M_contig117127.3542.1 vs. uniprot
Match: A0A353ZHK1_9PLAN (DUF1501 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A353ZHK1_9PLAN)

HSP 1 Score: 277 bits (709), Expect = 1.020e-89
Identity = 131/159 (82.39%), Postives = 149/159 (93.71%), Query Frame = 1 
Query:    1 ALLSRRLIEAGVRFVSLNTGYWDDHGNIKRALDNKLPRHDRAVGVLIQDMADRGMLDDTLVITAGEFGRTPRINKNAGRDHWPQAQSILLTGGGFQHGQVIGSTNDKAEHPTSRKIGVEDFCAIVYHALGLKADDIVID-RSDRPVHLLPGGQVPHELL 474
            ALL+RRLIEAGVR+VSLNTGYWDDHGN+K ALD+K+PRHDRAVGVLIQD+A+RGMLDDTLVI+AGEFGRTP INK+AGRDHWPQAQSILL GGG++HGQVIGSTN KAE+PTSRK+GVEDFCAIVYHALGL+ DD ++D RS RP HL+PGG+VP ELL
Sbjct:  295 ALLARRLIEAGVRYVSLNTGYWDDHGNLKGALDDKMPRHDRAVGVLIQDLAERGMLDDTLVISAGEFGRTPVINKDAGRDHWPQAQSILLAGGGYRHGQVIGSTNAKAEYPTSRKVGVEDFCAIVYHALGLRVDDTLVDQRSGRPQHLVPGGEVPRELL 453
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BLAST of mRNA_M-pyrifera_M_contig117127.3542.1 vs. uniprot
Match: A0A517Z512_9PLAN (Uncharacterized protein n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z512_9PLAN)

HSP 1 Score: 273 bits (699), Expect = 3.190e-88
Identity = 128/158 (81.01%), Postives = 144/158 (91.14%), Query Frame = 1 
Query:    1 ALLSRRLIEAGVRFVSLNTGYWDDHGNIKRALDNKLPRHDRAVGVLIQDMADRGMLDDTLVITAGEFGRTPRINKNAGRDHWPQAQSILLTGGGFQHGQVIGSTNDKAEHPTSRKIGVEDFCAIVYHALGLKADDIVIDRSDRPVHLLPGGQVPHELL 474
            ALL+RRLIEAGVRFVSLNTGYWDDHGNI+RAL++KLPRHDRAVGVLIQD+ADRGMLDD LV++AGEFGRTPRIN NAGRDHWPQAQSILL GGG++HGQ+IGSTNDKAE+PTSR IGVEDFCA +YHALGL  D  + +   RP+HLLPGG+VP ELL
Sbjct:  295 ALLARRLIEAGVRFVSLNTGYWDDHGNIERALNDKLPRHDRAVGVLIQDLADRGMLDDVLVVSAGEFGRTPRINGNAGRDHWPQAQSILLAGGGYRHGQIIGSTNDKAEYPTSRAIGVEDFCATIYHALGLSPDLTIQNPQGRPMHLLPGGEVPRELL 452
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BLAST of mRNA_M-pyrifera_M_contig117127.3542.1 vs. uniprot
Match: A0A517QIU3_9PLAN (Uncharacterized protein n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QIU3_9PLAN)

HSP 1 Score: 273 bits (699), Expect = 3.190e-88
Identity = 129/158 (81.65%), Postives = 142/158 (89.87%), Query Frame = 1 
Query:    1 ALLSRRLIEAGVRFVSLNTGYWDDHGNIKRALDNKLPRHDRAVGVLIQDMADRGMLDDTLVITAGEFGRTPRINKNAGRDHWPQAQSILLTGGGFQHGQVIGSTNDKAEHPTSRKIGVEDFCAIVYHALGLKADDIVIDRSDRPVHLLPGGQVPHELL 474
            ALL+RRL+EAGVRFVSLNTGYWDDH NIKR LD K+PRHDRAVGVLIQD+ADRGMLDDTLVI+AGEFGRTP+IN NAGRDHWPQAQSILL+GGG++HGQVIGSTN  AE+PTSR +GVEDFCAIVY ALGL  DD +ID S RPVHLLP G VP EL+
Sbjct:  295 ALLARRLVEAGVRFVSLNTGYWDDHSNIKRGLDAKMPRHDRAVGVLIQDLADRGMLDDTLVISAGEFGRTPKINGNAGRDHWPQAQSILLSGGGYRHGQVIGSTNANAEYPTSRPVGVEDFCAIVYRALGLNVDDTIIDPSGRPVHLLPSGVVPRELI 452
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BLAST of mRNA_M-pyrifera_M_contig117127.3542.1 vs. uniprot
Match: A0A1P8WLI1_9PLAN (Uncharacterized protein n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WLI1_9PLAN)

HSP 1 Score: 273 bits (698), Expect = 4.150e-88
Identity = 129/158 (81.65%), Postives = 145/158 (91.77%), Query Frame = 1 
Query:    1 ALLSRRLIEAGVRFVSLNTGYWDDHGNIKRALDNKLPRHDRAVGVLIQDMADRGMLDDTLVITAGEFGRTPRINKNAGRDHWPQAQSILLTGGGFQHGQVIGSTNDKAEHPTSRKIGVEDFCAIVYHALGLKADDIVIDRSDRPVHLLPGGQVPHELL 474
            ALL+RRLI+AGVR+VSLNTGY+DDHGNI+ AL NKLPRHD+AVGVLIQD+A+RGMLDDTLV+ AGEFG TPRIN NAGRDHWPQAQSILL GGG++HGQVIGSTNDKAEHPTSRKIGVEDFCA VYHA+GL  +D +ID S RPV+LLP G+VPHELL
Sbjct:  292 ALLARRLIQAGVRYVSLNTGYFDDHGNIEPALKNKLPRHDKAVGVLIQDLAERGMLDDTLVVVAGEFGHTPRINANAGRDHWPQAQSILLAGGGYRHGQVIGSTNDKAEHPTSRKIGVEDFCATVYHAMGLTKNDQLIDLSGRPVNLLPSGEVPHELL 449
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BLAST of mRNA_M-pyrifera_M_contig117127.3542.1 vs. uniprot
Match: A0A2E0B4T3_9BACT (Uncharacterized protein n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A2E0B4T3_9BACT)

HSP 1 Score: 273 bits (698), Expect = 5.500e-88
Identity = 125/158 (79.11%), Postives = 145/158 (91.77%), Query Frame = 1 
Query:    1 ALLSRRLIEAGVRFVSLNTGYWDDHGNIKRALDNKLPRHDRAVGVLIQDMADRGMLDDTLVITAGEFGRTPRINKNAGRDHWPQAQSILLTGGGFQHGQVIGSTNDKAEHPTSRKIGVEDFCAIVYHALGLKADDIVIDRSDRPVHLLPGGQVPHELL 474
            ALL+RRL+EAGVRFVSLNTGYWD+H NIK+ALD+K+P HDRAVGVLIQD+A+RGML+DTLV++AGEFGRTP+IN NAGRDHWPQAQSIL  GGG++HGQVIG+TNDKAEHP SRK+GVEDFCAIVY A+ LK DD VID+S RPVHLLPGG VP E++
Sbjct:  302 ALLARRLVEAGVRFVSLNTGYWDNHSNIKQALDSKMPMHDRAVGVLIQDLAERGMLEDTLVVSAGEFGRTPKINGNAGRDHWPQAQSILFAGGGYRHGQVIGATNDKAEHPISRKVGVEDFCAIVYRAMNLKPDDTVIDQSGRPVHLLPGGTVPREMI 459
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BLAST of mRNA_M-pyrifera_M_contig117127.3542.1 vs. uniprot
Match: A0A7C7SY69_9PLAN (DUF1501 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7SY69_9PLAN)

HSP 1 Score: 269 bits (688), Expect = 1.160e-86
Identity = 124/158 (78.48%), Postives = 141/158 (89.24%), Query Frame = 1 
Query:    1 ALLSRRLIEAGVRFVSLNTGYWDDHGNIKRALDNKLPRHDRAVGVLIQDMADRGMLDDTLVITAGEFGRTPRINKNAGRDHWPQAQSILLTGGGFQHGQVIGSTNDKAEHPTSRKIGVEDFCAIVYHALGLKADDIVIDRSDRPVHLLPGGQVPHELL 474
            ALL+RRL+EAGVRFVSLNTGYWD+H NIKRALD KLPRHD+AVGVLI D+A+RGMLDD LV+TAGEFGRTPR+NKNAGRDHWPQAQSIL+ GGGF+HGQV+G+TN KAEHP  R IGV DFCAI+YHALG++  D + D S RPVHLLPGG+VP ELL
Sbjct:  287 ALLARRLVEAGVRFVSLNTGYWDNHSNIKRALDEKLPRHDQAVGVLIDDLAERGMLDDVLVVTAGEFGRTPRMNKNAGRDHWPQAQSILVAGGGFRHGQVVGATNSKAEHPIDRAIGVLDFCAIIYHALGMRPGDSIPDLSGRPVHLLPGGEVPRELL 444
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BLAST of mRNA_M-pyrifera_M_contig117127.3542.1 vs. uniprot
Match: A0A517ZWL0_9PLAN (Uncharacterized protein n=4 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZWL0_9PLAN)

HSP 1 Score: 268 bits (684), Expect = 6.150e-86
Identity = 124/158 (78.48%), Postives = 138/158 (87.34%), Query Frame = 1 
Query:    1 ALLSRRLIEAGVRFVSLNTGYWDDHGNIKRALDNKLPRHDRAVGVLIQDMADRGMLDDTLVITAGEFGRTPRINKNAGRDHWPQAQSILLTGGGFQHGQVIGSTNDKAEHPTSRKIGVEDFCAIVYHALGLKADDIVIDRSDRPVHLLPGGQVPHELL 474
            ALL+RRLIE GVRFVSLNTGYWDDH NI  AL++K+PRHDRAVGVLI+D+A RGMLDDTLV+TAGEFGRTP+IN NAGRDHWPQAQSIL  GGG++HGQVIGSTN  AEHPTSRKIGV DFCAI+YHALGL  DD + D + RPVHLL GG VP E+L
Sbjct:  297 ALLARRLIETGVRFVSLNTGYWDDHSNINNALNSKMPRHDRAVGVLIEDLAQRGMLDDTLVVTAGEFGRTPKINANAGRDHWPQAQSILFAGGGYRHGQVIGSTNGNAEHPTSRKIGVNDFCAIIYHALGLHPDDTITDPTGRPVHLLEGGNVPREML 454
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BLAST of mRNA_M-pyrifera_M_contig117127.3542.1 vs. uniprot
Match: A0A3L7USE7_9BACT (DUF1501 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7USE7_9BACT)

HSP 1 Score: 265 bits (676), Expect = 4.740e-85
Identity = 123/158 (77.85%), Postives = 141/158 (89.24%), Query Frame = 1 
Query:    1 ALLSRRLIEAGVRFVSLNTGYWDDHGNIKRALDNKLPRHDRAVGVLIQDMADRGMLDDTLVITAGEFGRTPRINKNAGRDHWPQAQSILLTGGGFQHGQVIGSTNDKAEHPTSRKIGVEDFCAIVYHALGLKADDIVIDRSDRPVHLLPGGQVPHELL 474
            ALL+RRLI+AGVR+VSLNTGY+DDH NI+ AL +KLP+HD+ VGVLIQD+ADRGMLDDTLV+ AGEFG TPRIN N GRDHWPQAQSILL GGG++HGQ+IGSTNDKAE PTSRK+GVEDFCAIVYHA+GLK DD ++D S RP HL+PGG VP ELL
Sbjct:  271 ALLARRLIQAGVRYVSLNTGYFDDHSNIEPALKSKLPQHDKCVGVLIQDLADRGMLDDTLVVVAGEFGHTPRINGNGGRDHWPQAQSILLAGGGYRHGQIIGSTNDKAEFPTSRKVGVEDFCAIVYHAMGLKIDDSIMDLSGRPTHLVPGGVVPSELL 428
[Close]
BLAST of mRNA_M-pyrifera_M_contig117127.3542.1 vs. uniprot
Match: A0A350C9I7_9PLAN (DUF1501 domain-containing protein n=3 Tax=Planctomycetia TaxID=203683 RepID=A0A350C9I7_9PLAN)

HSP 1 Score: 263 bits (672), Expect = 4.790e-84
Identity = 120/158 (75.95%), Postives = 143/158 (90.51%), Query Frame = 1 
Query:    1 ALLSRRLIEAGVRFVSLNTGYWDDHGNIKRALDNKLPRHDRAVGVLIQDMADRGMLDDTLVITAGEFGRTPRINKNAGRDHWPQAQSILLTGGGFQHGQVIGSTNDKAEHPTSRKIGVEDFCAIVYHALGLKADDIVIDRSDRPVHLLPGGQVPHELL 474
            ALL+RRL+EAGVR+VSLNTGY+DDHG+I+ AL +KLPRHDRAVGVLIQD+A+RGMLDDTLV+ AGEFG TPRIN NAGRDHWPQAQSILL GGGF+HGQVIG+TNDKAE+P S+ + VEDFCAIVYHA+GL+ DD+++D + RP HL+P G+VP ELL
Sbjct:  302 ALLARRLVEAGVRYVSLNTGYFDDHGSIEPALKDKLPRHDRAVGVLIQDLAERGMLDDTLVVVAGEFGHTPRINANAGRDHWPQAQSILLAGGGFRHGQVIGATNDKAEYPVSKPVSVEDFCAIVYHAMGLRTDDVIMDLAGRPTHLVPAGEVPAELL 459
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117127.3542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B9CZI5_9PLAN9.090e-9082.91DUF1501 domain-containing protein n=1 Tax=Planctom... [more]
A0A353ZHK1_9PLAN1.020e-8982.39DUF1501 domain-containing protein n=1 Tax=Planctom... [more]
A0A517Z512_9PLAN3.190e-8881.01Uncharacterized protein n=1 Tax=Maioricimonas rari... [more]
A0A517QIU3_9PLAN3.190e-8881.65Uncharacterized protein n=1 Tax=Thalassoglobus pol... [more]
A0A1P8WLI1_9PLAN4.150e-8881.65Uncharacterized protein n=1 Tax=Fuerstiella marisg... [more]
A0A2E0B4T3_9BACT5.500e-8879.11Uncharacterized protein n=2 Tax=Planctomycetia Tax... [more]
A0A7C7SY69_9PLAN1.160e-8678.48DUF1501 domain-containing protein n=1 Tax=Planctom... [more]
A0A517ZWL0_9PLAN6.150e-8678.48Uncharacterized protein n=4 Tax=Symmachiella TaxID... [more]
A0A3L7USE7_9BACT4.740e-8577.85DUF1501 domain-containing protein n=1 Tax=Planctom... [more]
A0A350C9I7_9PLAN4.790e-8475.95DUF1501 domain-containing protein n=3 Tax=Planctom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117127contigM-pyrifera_M_contig117127:2..478 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score261.9
Seed ortholog evalue1.9e-67
Seed eggNOG ortholog1123242.JH636435_gene1191
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein of unknown function (DUF1501)
EggNOG OGs2IWS8@203682,COG4102@1,COG4102@2
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size477
Cds size477
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815688.6301215-CDS-M-pyrifera_M_contig117127:1..4781622815688.6301215-CDS-M-pyrifera_M_contig117127:1..478Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117127 2..478 +
1692277522.7400417-CDS-M-pyrifera_M_contig117127:1..4781692277522.7400417-CDS-M-pyrifera_M_contig117127:1..478Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117127 2..478 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117127.3542.1prot_M-pyrifera_M_contig117127.3542.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig117127 2..478 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig117127.3542.1

>prot_M-pyrifera_M_contig117127.3542.1 ID=prot_M-pyrifera_M_contig117127.3542.1|Name=mRNA_M-pyrifera_M_contig117127.3542.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=159bp
ALLSRRLIEAGVRFVSLNTGYWDDHGNIKRALDNKLPRHDRAVGVLIQDM
ADRGMLDDTLVITAGEFGRTPRINKNAGRDHWPQAQSILLTGGGFQHGQV
IGSTNDKAEHPTSRKIGVEDFCAIVYHALGLKADDIVIDRSDRPVHLLPG
GQVPHELL*
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mRNA from alignment at M-pyrifera_M_contig117127:2..478+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig117127.3542.1 ID=mRNA_M-pyrifera_M_contig117127.3542.1|Name=mRNA_M-pyrifera_M_contig117127.3542.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=477bp|location=Sequence derived from alignment at M-pyrifera_M_contig117127:2..478+ (Macrocystis pyrifera P11B4 male)
GCTCTGCTCTCCCGGCGGCTCATCGAAGCGGGAGTACGATTCGTCTCGCT
GAACACGGGTTATTGGGACGATCACGGCAACATCAAACGGGCCCTCGACA
ACAAACTCCCTCGACACGACCGGGCTGTCGGTGTGCTCATCCAAGACATG
GCCGATCGAGGCATGCTGGACGACACACTGGTCATCACAGCTGGCGAATT
CGGTCGTACCCCGCGCATCAACAAGAACGCCGGTCGCGATCACTGGCCTC
AAGCTCAGAGTATTCTCCTCACCGGCGGCGGTTTCCAACACGGCCAAGTC
ATTGGCAGCACCAACGACAAAGCTGAACATCCAACATCCCGCAAAATCGG
CGTCGAAGACTTCTGCGCGATCGTCTATCACGCCTTGGGCCTCAAGGCGG
ACGACATTGTAATCGACCGCAGCGATCGCCCGGTGCACTTGCTCCCCGGT
GGACAGGTCCCTCACGAGTTGTTGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig117127:2..478+

>mRNA_M-pyrifera_M_contig117127.3542.1 ID=mRNA_M-pyrifera_M_contig117127.3542.1|Name=mRNA_M-pyrifera_M_contig117127.3542.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=954bp|location=Sequence derived from alignment at M-pyrifera_M_contig117127:2..478+ (Macrocystis pyrifera P11B4 male)
GCTCTGCTCTCCCGGCGGCTCATCGAAGCGGGAGTACGATTCGTCTCGCT
GAACACGGGTTATTGGGACGATCACGGCAACATCAAACGGGCCCTCGACA
ACAAACTCCCTCGACACGACCGGGCTGTCGGTGTGCTCATCCAAGACATG
GCCGATCGAGGCATGCTGGACGACACACTGGTCATCACAGCTGGCGAATT
CGGTCGTACCCCGCGCATCAACAAGAACGCCGGTCGCGATCACTGGCCTC
AAGCTCAGAGTATTCTCCTCACCGGCGGCGGTTTCCAACACGGCCAAGTC
ATTGGCAGCACCAACGACAAAGCTGAACATCCAACATCCCGCAAAATCGG
CGTCGAAGACTTCTGCGCGATCGTCTATCACGCCTTGGGCCTCAAGGCGG
ACGACATTGTAATCGACCGCAGCGATCGCCCGGTGCACTTGCTCCCCGGT
GGACAGGTCCCTCACGAGTTGTTGTAAGCTCTGCTCTCCCGGCGGCTCAT
CGAAGCGGGAGTACGATTCGTCTCGCTGAACACGGGTTATTGGGACGATC
ACGGCAACATCAAACGGGCCCTCGACAACAAACTCCCTCGACACGACCGG
GCTGTCGGTGTGCTCATCCAAGACATGGCCGATCGAGGCATGCTGGACGA
CACACTGGTCATCACAGCTGGCGAATTCGGTCGTACCCCGCGCATCAACA
AGAACGCCGGTCGCGATCACTGGCCTCAAGCTCAGAGTATTCTCCTCACC
GGCGGCGGTTTCCAACACGGCCAAGTCATTGGCAGCACCAACGACAAAGC
TGAACATCCAACATCCCGCAAAATCGGCGTCGAAGACTTCTGCGCGATCG
TCTATCACGCCTTGGGCCTCAAGGCGGACGACATTGTAATCGACCGCAGC
GATCGCCCGGTGCACTTGCTCCCCGGTGGACAGGTCCCTCACGAGTTGTT
GTAA
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