mRNA_M-pyrifera_M_contig117054.3520.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117054.3520.1 vs. uniprot
Match: A0A0P1B8A9_PLAHL (Superoxide dismutase [Fe] n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B8A9_PLAHL) HSP 1 Score: 100 bits (249), Expect = 4.160e-25 Identity = 48/80 (60.00%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 1 ARASAVGVRSYSKPVLPELPYDYGELEPVISGKIMELHHSKHHATYVNNVNNAITQLEEAEAKGDAAKVASLQQAFRFNG 240
A A+G RS S LP+LPYD+G LEP ISG+IME+HH KHH YVNN N A+ Q +EAE+KGD AK+ L QA +FNG
Sbjct: 14 ASLRAIGTRSTSSVTLPDLPYDFGALEPSISGQIMEIHHQKHHQAYVNNYNAALEQYDEAESKGDHAKLLGLLQALKFNG 93
BLAST of mRNA_M-pyrifera_M_contig117054.3520.1 vs. uniprot
Match: UPI000C872F3F (superoxide dismutase [Mn], mitochondrial-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI000C872F3F) HSP 1 Score: 100 bits (248), Expect = 2.640e-24 Identity = 47/76 (61.84%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 13 AVGVRSYSKPVLPELPYDYGELEPVISGKIMELHHSKHHATYVNNVNNAITQLEEAEAKGDAAKVASLQQAFRFNG 240
A G++++S LP+LPYDYGELEP ISG+IM++HH KHH TY+ N N A+ QLEEA AKGD++KV LQ A +FNG
Sbjct: 25 ARGLQTFS---LPDLPYDYGELEPAISGEIMKIHHQKHHQTYITNYNKALEQLEEAMAKGDSSKVVGLQSAIKFNG 97
BLAST of mRNA_M-pyrifera_M_contig117054.3520.1 vs. uniprot
Match: H9XW29_9ERIC (Manganese superoxide dismutase 9 (Fragment) n=1 Tax=Diospyros oleifera TaxID=227308 RepID=H9XW29_9ERIC) HSP 1 Score: 96.3 bits (238), Expect = 6.620e-24 Identity = 49/84 (58.33%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 1 ARASAVGVRSYSKPV----LPELPYDYGELEPVISGKIMELHHSKHHATYVNNVNNAITQLEEAEAKGDAAKVASLQQAFRFNG 240
A+ AVG ++S+ LP+LPYDYG LEP ISG+IM+LHH KHH TYV N N A+ QL +A AKGDAA V LQ A +FNG
Sbjct: 43 AKILAVGSTAHSRGFQTFSLPDLPYDYGALEPAISGEIMQLHHQKHHQTYVTNYNKALEQLHDAIAKGDAAAVVKLQSAIKFNG 126
BLAST of mRNA_M-pyrifera_M_contig117054.3520.1 vs. uniprot
Match: H9XW30_9ERIC (Manganese superoxide dismutase 10 (Fragment) n=2 Tax=Diospyros oleifera TaxID=227308 RepID=H9XW30_9ERIC) HSP 1 Score: 96.3 bits (238), Expect = 6.800e-24 Identity = 49/84 (58.33%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 1 ARASAVGVRSYSKPV----LPELPYDYGELEPVISGKIMELHHSKHHATYVNNVNNAITQLEEAEAKGDAAKVASLQQAFRFNG 240
A+ AVG ++S+ LP+LPYDYG LEP ISG+IM+LHH KHH TYV N N A+ QL +A AKGDAA V LQ A +FNG
Sbjct: 44 AKILAVGSTAHSRGFQTLSLPDLPYDYGALEPAISGEIMQLHHQKHHQTYVTNYNKALEQLHDAIAKGDAAAVVKLQSAIKFNG 127
BLAST of mRNA_M-pyrifera_M_contig117054.3520.1 vs. uniprot
Match: A0A4D8XVW6_SALSN (Superoxide dismutase, Fe-Mn family n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8XVW6_SALSN) HSP 1 Score: 95.5 bits (236), Expect = 1.070e-23 Identity = 45/80 (56.25%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 1 ARASAVGVRSYSKPVLPELPYDYGELEPVISGKIMELHHSKHHATYVNNVNNAITQLEEAEAKGDAAKVASLQQAFRFNG 240
A ++ G++++S LP+LPYDYGELEP IS +IM+LHH KHH TY+ N N A+ QL+ A AKGDA+ V LQ A +FNG
Sbjct: 16 APVASRGIQTFS---LPDLPYDYGELEPAISAEIMQLHHQKHHQTYITNYNKALEQLDAAAAKGDASTVVKLQSAIKFNG 92
BLAST of mRNA_M-pyrifera_M_contig117054.3520.1 vs. uniprot
Match: D3J1L2_PENJP (Superoxide dismutase n=10 Tax=Penaeus TaxID=133894 RepID=D3J1L2_PENJP) HSP 1 Score: 98.2 bits (243), Expect = 1.190e-23 Identity = 49/77 (63.64%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 10 SAVGVRSYSKPVLPELPYDYGELEPVISGKIMELHHSKHHATYVNNVNNAITQLEEAEAKGDAAKVASLQQAFRFNG 240
+AVGVRS K LP+LPYDY LEPVI +IM+LHHSKHH TYVNN+N A +L EA+AKGD V SL A +FNG
Sbjct: 15 AAVGVRSQQKHTLPDLPYDYNALEPVICAEIMQLHHSKHHQTYVNNLNVAEEKLAEAQAKGDVNTVISLAPALKFNG 91
BLAST of mRNA_M-pyrifera_M_contig117054.3520.1 vs. uniprot
Match: A0A3R7SM99_PENVA (Mitochondrial MnSOD (Fragment) n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7SM99_PENVA) HSP 1 Score: 94.7 bits (234), Expect = 1.200e-23 Identity = 47/74 (63.51%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 19 GVRSYSKPVLPELPYDYGELEPVISGKIMELHHSKHHATYVNNVNNAITQLEEAEAKGDAAKVASLQQAFRFNG 240
GVRS K LP+LPYDY LEPVI +IM+LHHSKHH TYVNN+N A +L EA+AKGD V SL A +FNG
Sbjct: 5 GVRSQQKHTLPDLPYDYNALEPVICAEIMQLHHSKHHQTYVNNLNVAEEKLAEAQAKGDVNTVISLAPALKFNG 78
BLAST of mRNA_M-pyrifera_M_contig117054.3520.1 vs. uniprot
Match: A8JAX1_CHLRE (Superoxide dismutase n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8JAX1_CHLRE) HSP 1 Score: 98.2 bits (243), Expect = 1.240e-23 Identity = 48/72 (66.67%), Postives = 55/72 (76.39%), Query Frame = 1
Query: 25 RSYSKPVLPELPYDYGELEPVISGKIMELHHSKHHATYVNNVNNAITQLEEAEAKGDAAKVASLQQAFRFNG 240
R+ S LP+LPY YG LEP ISG+IMELHHSKHHATYV N+N A+ Q EAE KGD AK+ SLQ A +FNG
Sbjct: 22 RAMSSVKLPDLPYSYGALEPYISGQIMELHHSKHHATYVANLNKALEQQAEAEHKGDVAKLISLQSAIKFNG 93
BLAST of mRNA_M-pyrifera_M_contig117054.3520.1 vs. uniprot
Match: A0A2G9HSY8_9LAMI (Superoxide dismutase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HSY8_9LAMI) HSP 1 Score: 98.2 bits (243), Expect = 1.300e-23 Identity = 46/79 (58.23%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 4 RASAVGVRSYSKPVLPELPYDYGELEPVISGKIMELHHSKHHATYVNNVNNAITQLEEAEAKGDAAKVASLQQAFRFNG 240
R S++G+R LP+LPYDYG LEP ISG+IM+LHH KHH TYV N N AI QL+ A +KGDA+ + LQ A +FNG
Sbjct: 13 RTSSLGLRGLQTFSLPDLPYDYGALEPAISGEIMQLHHQKHHQTYVTNFNKAIEQLDGAASKGDASTIVKLQSAIKFNG 91
BLAST of mRNA_M-pyrifera_M_contig117054.3520.1 vs. uniprot
Match: A0A446MV64_TRITD (Sod_Fe_N domain-containing protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446MV64_TRITD) HSP 1 Score: 94.7 bits (234), Expect = 1.380e-23 Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 1
Query: 19 GVRSYSKPVLPELPYDYGELEPVISGKIMELHHSKHHATYVNNVNNAITQLEEAEAKGDAAKVASLQQAFRFNG 240
G R + LP+LPYDYG LEP +SG+IM LHH KHHATYV N N A+ QL+ A +KGDA+ V LQ A +FNG
Sbjct: 18 GARGVATFTLPDLPYDYGALEPAVSGEIMRLHHQKHHATYVANYNKALEQLDAAASKGDASAVVGLQSAIKFNG 91 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117054.3520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117054.3520.1 >prot_M-pyrifera_M_contig117054.3520.1 ID=prot_M-pyrifera_M_contig117054.3520.1|Name=mRNA_M-pyrifera_M_contig117054.3520.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp ARASAVGVRSYSKPVLPELPYDYGELEPVISGKIMELHHSKHHATYVNNVback to top mRNA from alignment at M-pyrifera_M_contig117054:56..295- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117054.3520.1 ID=mRNA_M-pyrifera_M_contig117054.3520.1|Name=mRNA_M-pyrifera_M_contig117054.3520.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=240bp|location=Sequence derived from alignment at M-pyrifera_M_contig117054:56..295- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117054:56..295- >mRNA_M-pyrifera_M_contig117054.3520.1 ID=mRNA_M-pyrifera_M_contig117054.3520.1|Name=mRNA_M-pyrifera_M_contig117054.3520.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig117054:56..295- (Macrocystis pyrifera P11B4 male)back to top |