mRNA_M-pyrifera_M_contig11703.3516.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11703.3516.1 vs. uniprot
Match: D7FJW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW1_ECTSI) HSP 1 Score: 383 bits (983), Expect = 8.880e-122 Identity = 292/546 (53.48%), Postives = 325/546 (59.52%), Query Frame = 1
Query: 1 QAHRCALGAEDSSRRGDHGMATDLHLDAARGFLTAAEQVQEHGVLASSLLLLADSHAACAEKGALRLRLTK--KDSLGGA--SSKDLTPAEAYRAAGAASGRGVGRPGGGSGKRPAQPGEGGDGHSRPNANVPDMDDSIMRGPGAR-KAVAATGXXXXXXXXXXXXXXXAELAKKFRPQRDDLLELERQLAKLGLESKTGGPGGRARHRQSLGNPGAHLSSALGESFCLLNQSVIFGGGLAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERRGEGGRXGGPEDSGPEVL-----SPLGGVEVKRG----DAGDG----GHVVGRG---RVGSAAEGXXXXXXXXXXXXXXXXXXXXXXSRGVRACEE-------ETEDRRLSQSGEE--RRAQEEEKEQGEIMRLLTCLKTLGDENVSLMKECEDRDKASKKFQSEAVRDEMRRFQLKYQERFTLLKKTLDEVVRSYPLLAAPGXXXXXXXXXXXXXXRTTEEVQRLSQSNRKLSAQVKKYEKYYLELCQKADSKRKEQLSQAKAAR 1548
+AHRCA GAED+ R+GDH AT+LHL AAR FL AAEQVQEHGVLASSLLLLADSHAA AEKGA+RLRL+ + SL + SS+DLTPAEAYRAA A GV G G G+R S ++ PDMDDSIMRG A AV A G AELA+KFRPQRDDLLELERQLAKLGLESK GGPGGRAR R S G HLSSALG+SF LN+SVIFGGG AGG GG G S P SP G ++ G + GDG G V G G RVG+ G + GV A E E L S EE RR +EEE +QGEIMRLLTCLKTLGDENVSLMKECEDRDK + +SEA+R+EM+RFQLKY ERFTLLKKTLDEV+RSYP LAAPG +TTEEVQRL+Q+NRKL+ QVKKYE YY ELC KA+SKRKEQLSQAKAAR
Sbjct: 14 KAHRCAQGAEDACRKGDHAEATELHLAAARDFLRAAEQVQEHGVLASSLLLLADSHAARAEKGAIRLRLSGEGRGSLNNSLSSSRDLTPAEAYRAAAA----GVKATGKGDGRRENVVXXXXXXXS--HSVGPDMDDSIMRGTVANGNAVEAKGGGCDAA---------AELAQKFRPQRDDLLELERQLAKLGLESKMGGPGGRARQRLSSGGA-PHLSSALGDSFFFLNKSVIFGGGGAGGNGPANAYGNGNGPAAGVLGSPGTRLGVTNPPG--------GGGGGWRSTSAPRRFNESDTSPEGAPQIPSGRGSDNVGDGTRADGRVAGGGETPRVGNTV-GRGADTARRVQGPGSGADRPSAGAGGVWAGESAGEGGGGEGRPALLLSSAEEEARRVREEEAQQGEIMRLLTCLKTLGDENVSLMKECEDRDKVRQ--ESEAIREEMKRFQLKYHERFTLLKKTLDEVMRSYPQLAAPGTASATGGASTSDPAKTTEEVQRLTQTNRKLTEQVKKYENYYKELCLKAESKRKEQLSQAKAAR 532
BLAST of mRNA_M-pyrifera_M_contig11703.3516.1 vs. uniprot
Match: A0A6H5KVB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVB2_9PHAE) HSP 1 Score: 275 bits (703), Expect = 6.630e-81 Identity = 210/412 (50.97%), Postives = 232/412 (56.31%), Query Frame = 1
Query: 391 MDDSIMRGPGAR-KAVAATGXXXXXXXXXXXXXXXAELAKKFRPQRDDLLELERQLAKLGLESKTGGPGGRARHRQSLGNPGAHLSSALGESFCLLNQSVIFGGGLAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERRGEGGRX-GGPEDSGPEVLSPLGGVEVKRG----DAGDG----GHVVGRG---RVGSAAEGXXXXXXXXXXXXXXXXXXXXXXSRGVRACEEETE--------DRRLSQSGEE-RRAQEEEKEQGEIMRLLTCLKTLGDENVSLMKECEDRDKASK----KFQSEAVRDEMRRFQLKYQERFTLLKKTLDEVVRSYPLLAAPGXXXXXXXXXXXXXXRTTEEVQRLSQSNRKLSAQVKKYEKYYLELCQKADSKRKEQLSQAKAAR 1548
MDDSIMRG A AV A G AELAKKFRPQRDDLLELERQLAKLGLESK GGPGGRAR R S G HLSSALG+SF LN+SVIFGG AGG G GGR P SP G ++ G + GDG G V G G RVG+ G + G A E E LS + EE RR +EEE +QGEIMRLLTCLKTLGDENVSLMKECE+RDKAS + +SEA+R+EM+RFQLKY ERFTLLKKTLDEV+RSYP LAAPG +T EEVQRL+Q+NRKL+ QVKKYE YY ELC KA+SKRKEQLSQAKAAR
Sbjct: 1 MDDSIMRGTAANGNAVEANGGGCDAA---------AELAKKFRPQRDDLLELERQLAKLGLESKMGGPGGRARQRLSSGGA-PHLSSALGDSFFFLNKSVIFGGAGAGGNGLVAVGGPANAYGNGNGPAAGVLGSPGTRPGVTNPPGGGGGRSTSAPRRFNEGDASPEGAPQIPSGRGSDNVGDGTRADGRVAGGGEIPRVGNTV-GRGADTARRVQGPGCGADRPSAGAGGAWAGESAREGGGGEGRPSLLLSSAEEEARRVREEEAQQGEIMRLLTCLKTLGDENVSLMKECEERDKASASTAVRQESEAIREEMKRFQLKYHERFTLLKKTLDEVMRSYPQLAAPGTASAAGGTSTSDPAKTVEEVQRLTQTNRKLTEQVKKYENYYKELCLKAESKRKEQLSQAKAAR 401
BLAST of mRNA_M-pyrifera_M_contig11703.3516.1 vs. uniprot
Match: W7TZI2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZI2_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.990e-5 Identity = 43/135 (31.85%), Postives = 67/135 (49.63%), Query Frame = 1
Query: 1129 EQGEIMRLLTCLKTLGDENVSLMKECEDRDKASKKFQSEAVRDEMRRFQLKYQERFTLLKKTLDEVVRSYPLLAAPGXXXXXXXXXXXXXXRTTE------EVQRLSQSNRKLSAQVKKYEKYYLELCQKADSKR 1515
+QGE++RLL C+KTLGDEN L+K ED ++A + ++E +R E FQ Y +RF L+ L+E YP + P E + R ++ RK A + +Y+ +Y +L Q K+
Sbjct: 356 QQGEVVRLLACMKTLGDENALLIKRAEDGERARQ--ENERIRRETLEFQELYAKRFKGLRAALEEFREKYPHESNPANHVASLRETARVKSLEAEVESLTVRLNREKEAGRKKDAMLARYQAWYTKLRQSVGQKK 488 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11703.3516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11703.3516.1 >prot_M-pyrifera_M_contig11703.3516.1 ID=prot_M-pyrifera_M_contig11703.3516.1|Name=mRNA_M-pyrifera_M_contig11703.3516.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=611bp QAHRCALGAEDSSRRGDHGMATDLHLDAARGFLTAAEQVQEHGVLASSLLback to top mRNA from alignment at M-pyrifera_M_contig11703:47..7165+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11703.3516.1 ID=mRNA_M-pyrifera_M_contig11703.3516.1|Name=mRNA_M-pyrifera_M_contig11703.3516.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7119bp|location=Sequence derived from alignment at M-pyrifera_M_contig11703:47..7165+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11703:47..7165+ >mRNA_M-pyrifera_M_contig11703.3516.1 ID=mRNA_M-pyrifera_M_contig11703.3516.1|Name=mRNA_M-pyrifera_M_contig11703.3516.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3666bp|location=Sequence derived from alignment at M-pyrifera_M_contig11703:47..7165+ (Macrocystis pyrifera P11B4 male)back to top |