prot_M-pyrifera_M_contig116560.3445.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116560.3445.1
Unique Nameprot_M-pyrifera_M_contig116560.3445.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length88
Homology
BLAST of mRNA_M-pyrifera_M_contig116560.3445.1 vs. uniprot
Match: A0A7S2XMW5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMW5_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.450e-17
Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    1 GQRRLRRILRAWSALDPSVGYCQGMSFLCAALLCTGLQEESAFWVFVSLMYD--CGLVRLYEDGLAGTRAMMRLVTELLRRHFPRLASH 87
            GQ  LRR+LRA+SA D  VGYCQGM+F+ AA+  T + EE +FW+ VS+M D  C +  L+ +G+AG   ++ +  +L+ +  P+LA+H
Sbjct:  161 GQASLRRVLRAYSAYDAEVGYCQGMNFI-AAMFITFMSEEESFWLLVSVMNDPPCHMRALFGEGMAGAHRVLYVADKLIGKFLPKLANH 248          
BLAST of mRNA_M-pyrifera_M_contig116560.3445.1 vs. uniprot
Match: A0A7S4HJ54_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HJ54_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.950e-16
Identity = 40/90 (44.44%), Postives = 60/90 (66.67%), Query Frame = 0
Query:    1 GQRRLRRILRAWSALDPSVGYCQGMSFLCAALLCTGLQEESAFWVFVSLMYD--CGLVRLYEDGLAGTRAMMRLVTELLRRHFPRLASHL 88
            GQ  LRR+LRA++A DP VGYCQGM+F+ AA+  T + EE AFW+ V +M +  C +  L+ +G+A    ++ +   L+R+  P+LA HL
Sbjct:   56 GQASLRRVLRAYAAHDPDVGYCQGMNFI-AAMFLTFMSEEEAFWLLVHVMNEEPCRMRGLFGEGMAHAHRVLHVAEGLIRQFLPKLAGHL 144          
BLAST of mRNA_M-pyrifera_M_contig116560.3445.1 vs. uniprot
Match: A0A7S1GDG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDG0_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.340e-16
Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    1 GQRRLRRILRAWSALDPSVGYCQGMSFLCAALLCTGLQEESAFWVFVSLMYDCGLVRLYEDGLAGTRAMMRLVTELLRRHFPRLASHL 88
            G   L R++ A++  DP++GY QGM FL  ALL TG+ EE+AFWVFVSLM   GL  LY  G      + R V +++R   P LAS L
Sbjct:  116 GAAALARMMTAYAHYDPALGYTQGMCFLAGALLLTGMAEETAFWVFVSLMTRFGLAGLYRPGFGLLGKVHRGVDDIVRTRMPALASRL 203          
BLAST of mRNA_M-pyrifera_M_contig116560.3445.1 vs. uniprot
Match: I0YKN8_COCSC (TBC-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YKN8_COCSC)

HSP 1 Score: 75.1 bits (183), Expect = 5.880e-14
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 0
Query:    1 GQRRLRRILRAWSALDPSVGYCQGMSFLCAALLCTGLQ--EESAFWVFVSLMYDCGLVR--LYEDGLAGTRAMMRLVTELLRRHFPRLASHL 88
            GQ  LRR+L A+SA  P+VGYCQGM++L AA+L   L+  EE++FW+ V+L+ D G++   LY   L G    MR + EL+    PRL  HL
Sbjct:  124 GQAALRRVLLAFSAHQPAVGYCQGMNYL-AAMLLLALERSEENSFWLLVALIDDGGILYQGLYSQNLVGAHVEMRSLQELVDAKLPRLRQHL 214          
BLAST of mRNA_M-pyrifera_M_contig116560.3445.1 vs. uniprot
Match: A0A2D4CH29_PYTIN (Rab-GAP TBC domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CH29_PYTIN)

HSP 1 Score: 75.1 bits (183), Expect = 7.320e-14
Identity = 38/87 (43.68%), Postives = 58/87 (66.67%), Query Frame = 0
Query:    2 QRRLRRILRAWSALDPSVGYCQGMSFLCAALLCTGLQEESAFWVFVSLMYDCGLVRLYEDGLAGTRAMMRLVTELLRRHFPRLASHL 88
            Q  LRR+L+A+   +P++GYCQ M+FL A LL   L+EE AFWV V+++ D  L + +   + G+RA +R+ T+L+ +  P LA HL
Sbjct:  243 QHELRRVLQAYCLRNPTIGYCQSMNFLGAVLL-QHLEEEEAFWVLVAMLEDL-LPQFHSHSMLGSRAELRVFTDLVHQKLPALAQHL 327          
BLAST of mRNA_M-pyrifera_M_contig116560.3445.1 vs. uniprot
Match: A0A8J9SHI4_9CHLO (TBC1 domain family member 2A n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SHI4_9CHLO)

HSP 1 Score: 73.2 bits (178), Expect = 2.890e-13
Identity = 42/90 (46.67%), Postives = 52/90 (57.78%), Query Frame = 0
Query:    1 GQRRLRRILRAWSALDPSVGYCQGMSFLCAALLCT-GLQEESAFWVFVSLMYDCGLVR--LYEDGLAGTRAMMRLVTELLRRHFPRLASH 87
            GQ  LRR+L A+SA  P VGYCQ M++L A LL      EE AFWV VSL+ D G++   +Y   L G    MR + EL+    PRL  H
Sbjct:  124 GQAALRRVLLAFSAHQPQVGYCQSMNYLAAMLLLALDRSEEKAFWVLVSLIDDGGILYQGMYSQNLVGAHVEMRSLQELVVAKLPRLHQH 213          
BLAST of mRNA_M-pyrifera_M_contig116560.3445.1 vs. uniprot
Match: A0A7S0UNG3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UNG3_9CHLO)

HSP 1 Score: 72.8 bits (177), Expect = 4.080e-13
Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = 0
Query:    1 GQRRLRRILRAWSALDPSVGYCQGMSFLCAALLCTGLQE-ESAFWVFVSLMYDCGLVRLYEDGLAGTRAMMRLVTELLRRHFPRLASHL 88
            GQ RLR++LRA+S  +PSVGYCQG++FL A L+ T  +  E AFW+ + ++        Y  GL G    MR ++ LL R  P L+ HL
Sbjct:  131 GQVRLRKVLRAFSQQNPSVGYCQGLNFLAAFLMLTQSRSAERAFWILICIVDRLLYPGTYASGLEGCHVEMRTLSSLLDRRKPALSKHL 219          
BLAST of mRNA_M-pyrifera_M_contig116560.3445.1 vs. uniprot
Match: A0A8K0KFV4_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KFV4_LADFU)

HSP 1 Score: 69.3 bits (168), Expect = 4.610e-13
Identity = 38/87 (43.68%), Postives = 49/87 (56.32%), Query Frame = 0
Query:    1 GQRRLRRILRAWSALDPSVGYCQGMSFLCAALLCTGLQEESAFWVFVSLMYDCGLVRLYEDGLAGTRAMMRLVTELLRRHFPRLASH 87
            GQ  L RI +A++  D  VGYCQG+SFL AALL   + EE AF V V LM+D GL  L++DG       +  +  L+    P L  H
Sbjct:    2 GQDSLYRISKAYAVYDEEVGYCQGLSFLAAALL-LHMPEEQAFCVLVKLMFDYGLRDLFKDGFENLYMRLYQLNRLMEEQLPELWQH 87          
BLAST of mRNA_M-pyrifera_M_contig116560.3445.1 vs. uniprot
Match: A0A7S0EXW2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EXW2_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 5.400e-13
Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 0
Query:    1 GQRRLRRILRAWSALDPSVGYCQGMSFLCAALLCTGLQEESAFWVFVSLMYDCGLVRLYEDGLAGTRAMMRLVTELLRRHFPRLASH 87
            GQ  L R+LRA++A +P++GY QGMS   A LL   + EE AFWVF +LM  CGL+ L+  G            +L ++  P+LA+H
Sbjct:   21 GQASLTRLLRAYAAYNPTLGYTQGMSSYAAVLLLY-MSEEDAFWVFATLMEHCGLLGLFAPGFPLLHTYYDRWMQLFKKRLPKLAAH 106          
BLAST of mRNA_M-pyrifera_M_contig116560.3445.1 vs. uniprot
Match: A0A267H4H7_9PLAT (Rab-GAP TBC domain-containing protein n=7 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267H4H7_9PLAT)

HSP 1 Score: 72.4 bits (176), Expect = 6.680e-13
Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0
Query:    5 LRRILRAWSALDPSVGYCQGMSFLCAALLCTGLQEESAFWVFVSLMYDCGLVRLYEDGLAGTRAMMRLVTELLRRHFPRLASH 87
            L R+ +A++  DP+VGYCQGMSFL AALL   L EE AF + V +MYD G+ +++  G  G +     +  LL++H P + SH
Sbjct:  562 LARLSKAYALYDPAVGYCQGMSFLGAALLLQ-LPEEEAFELLVQIMYDYGVRKMFTAGFEGLQLRFYQLDALLKQHCPEVFSH 643          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116560.3445.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2XMW5_9STRA3.450e-1744.94Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S4HJ54_9STRA1.950e-1644.44Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1GDG0_9STRA2.340e-1647.73Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
I0YKN8_COCSC5.880e-1446.74TBC-domain-containing protein n=1 Tax=Coccomyxa su... [more]
A0A2D4CH29_PYTIN7.320e-1443.68Rab-GAP TBC domain-containing protein n=2 Tax=Pyth... [more]
A0A8J9SHI4_9CHLO2.890e-1346.67TBC1 domain family member 2A n=1 Tax=Coccomyxa sp.... [more]
A0A7S0UNG3_9CHLO4.080e-1343.82Hypothetical protein (Fragment) n=1 Tax=Polytomell... [more]
A0A8K0KFV4_LADFU4.610e-1343.68Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A7S0EXW2_9EUKA5.400e-1342.53Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A267H4H7_9PLAT6.680e-1344.58Rab-GAP TBC domain-containing protein n=7 Tax=Macr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 1..88
e-value: 1.2E-25
score: 90.4
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..88
score: 18.143
NoneNo IPR availableGENE3D1.10.8.270coord: 1..51
e-value: 1.4E-17
score: 65.5
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 1..88
NoneNo IPR availablePANTHERPTHR22957:SF444coord: 1..88
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 1..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116560contigM-pyrifera_M_contig116560:26..289 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116560.3445.1mRNA_M-pyrifera_M_contig116560.3445.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116560 26..289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116560.3445.1 ID=prot_M-pyrifera_M_contig116560.3445.1|Name=mRNA_M-pyrifera_M_contig116560.3445.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=88bp
GQRRLRRILRAWSALDPSVGYCQGMSFLCAALLCTGLQEESAFWVFVSLM
YDCGLVRLYEDGLAGTRAMMRLVTELLRRHFPRLASHL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf