prot_M-pyrifera_M_contig11630.3382.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11630.3382.1
Unique Nameprot_M-pyrifera_M_contig11630.3382.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length79
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig11630.3382.1 vs. uniprot
Match: D8LCL7_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCL7_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 2.150e-25
Identity = 60/76 (78.95%), Postives = 64/76 (84.21%), Query Frame = 0 
Query:    4 SIAGETCSSLSMVLRKPERQLATLDLSCNELQASYMLYDDDIRLLCGALERNTNLTSVDLRMNDVSADLEDLEAIE 79
            SIA E CSSLSMVLRKP + LATLDLSCNELQ      DDDIRLLC ALERN++LTS+DLRMNDVSADLEDLE IE
Sbjct:  430 SIAREACSSLSMVLRKPGKVLATLDLSCNELQ------DDDIRLLCVALERNSSLTSIDLRMNDVSADLEDLEKIE 499
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11630.3382.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCL7_ECTSI2.150e-2578.95Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 24..35
e-value: 1.2
score: 9.4
coord: 55..69
e-value: 0.06
score: 13.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..78
e-value: 1.5E-10
score: 42.3
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 3..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11630contigM-pyrifera_M_contig11630:238..2381 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11630.3382.1mRNA_M-pyrifera_M_contig11630.3382.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11630 238..2381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11630.3382.1 ID=prot_M-pyrifera_M_contig11630.3382.1|Name=mRNA_M-pyrifera_M_contig11630.3382.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=79bp
SANSIAGETCSSLSMVLRKPERQLATLDLSCNELQASYMLYDDDIRLLCG
ALERNTNLTSVDLRMNDVSADLEDLEAIE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf