mRNA_M-pyrifera_M_contig11602.3330.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11602.3330.1 vs. uniprot
Match: D7FLN8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLN8_ECTSI) HSP 1 Score: 160 bits (406), Expect = 7.550e-46 Identity = 80/103 (77.67%), Postives = 92/103 (89.32%), Query Frame = 1
Query: 1 LAAYALGASLMQTGVSGEQLTGFVVAFSAMTPIGILLGDLIENDGEDDTAGATCVALAAGTFLYVSLMEVLPTELSSTQHGWSKIGSLLAGFAVSAVVSWLVG 309
LAAYALGASL+Q+GV G+Q+T FV+AFSAMTP+GILLG LIE DGEDD+ GA CVALAAGTFLYVSLMEVLP EL+ST++GWSK+GSL+ GF VSA V WLVG
Sbjct: 297 LAAYALGASLLQSGVYGKQVTLFVIAFSAMTPLGILLGALIEKDGEDDSGGAVCVALAAGTFLYVSLMEVLPPELASTENGWSKMGSLVLGFVVSAGVGWLVG 399
BLAST of mRNA_M-pyrifera_M_contig11602.3330.1 vs. uniprot
Match: D7FLN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLN7_ECTSI) HSP 1 Score: 142 bits (357), Expect = 5.440e-39 Identity = 66/103 (64.08%), Postives = 88/103 (85.44%), Query Frame = 1
Query: 1 LAAYALGASLMQTGVSGEQLTGFVVAFSAMTPIGILLGDLIENDGEDDTAGATCVALAAGTFLYVSLMEVLPTELSSTQHGWSKIGSLLAGFAVSAVVSWLVG 309
+A YALGA+L+Q+GV +Q+T +++AFSAMTP+GIL+G +I+ D ++D+ GA CVALAAGTFLYVSLMEVLP EL+ST++GWSK+GSL+ GF V+ V WLVG
Sbjct: 251 IAGYALGAALLQSGVHAKQVTLYILAFSAMTPLGILIGAIIQQDADNDSGGAVCVALAAGTFLYVSLMEVLPPELASTENGWSKMGSLVLGFLVATGVGWLVG 353
BLAST of mRNA_M-pyrifera_M_contig11602.3330.1 vs. uniprot
Match: A0A8J4AZN8_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AZN8_9CHLO) HSP 1 Score: 85.5 bits (210), Expect = 2.330e-17 Identity = 42/99 (42.42%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 1 LAAYALGASLMQTGVSGEQLTGFVVAFSAMTPIGILLGDLIENDGEDDTAGATCVALAAGTFLYVSLMEVLPTELSSTQHGWSKIGSLLAGFAVSAVVS 297
LAAYALGAS+M++G S E+ + FS TP+GI G + + T+GA ALA+GTFLYV+ MEV+P EL+ +H +K+ + L G+++ ++++
Sbjct: 323 LAAYALGASIMESGASSERFWTVIGCFSLATPLGIFAGYGMSTRSANGTSGAALSALASGTFLYVAFMEVIPKELADGKHRMAKMAAFLLGYSLMSLLA 421
BLAST of mRNA_M-pyrifera_M_contig11602.3330.1 vs. uniprot
Match: A0A8J4GAD1_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GAD1_9CHLO) HSP 1 Score: 85.1 bits (209), Expect = 3.340e-17 Identity = 42/99 (42.42%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 1 LAAYALGASLMQTGVSGEQLTGFVVAFSAMTPIGILLGDLIENDGEDDTAGATCVALAAGTFLYVSLMEVLPTELSSTQHGWSKIGSLLAGFAVSAVVS 297
LAAYALGAS+M++G S E+ + FS TP+GI G + + T+GA ALA+GTFLYV+ MEV+P EL+ +H +K+ + L G+++ ++++
Sbjct: 334 LAAYALGASIMESGASSERFWTVIGCFSLATPLGIFAGYGMSTRSANGTSGAALSALASGTFLYVAFMEVIPKELADGKHRLAKMAAFLLGYSLMSLLA 432
BLAST of mRNA_M-pyrifera_M_contig11602.3330.1 vs. uniprot
Match: A0A3R7JXR2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JXR2_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.780e-16 Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = 1
Query: 1 LAAYALGASLMQTGVSGEQLTGFVVAFSAMTPIGILLGDLIENDGEDDTAGATCVALAAGTFLYVSLMEVLPTELSSTQHGWSKIGSLLAGFAVSAVVS 297
LAA+AL M S QL V FS MTP+GIL G L+ + AG C A A GTFL+VS+ME++P EL ++ K +L +G+A V+S
Sbjct: 250 LAAFALALEFMHHNASRTQLLTTVAVFSLMTPVGILFGRLLVDSENSTPAGGICAAFAGGTFLFVSIMEIIPQELQDPRYQLEKCSALFSGYAAMGVLS 348
BLAST of mRNA_M-pyrifera_M_contig11602.3330.1 vs. uniprot
Match: A0A835YCW4_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YCW4_9CHLO) HSP 1 Score: 80.1 bits (196), Expect = 2.060e-15 Identity = 41/99 (41.41%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 1 LAAYALGASLMQTGVSGEQLTGFVVAFSAMTPIGILLGDLIENDGEDDTAGATCVALAAGTFLYVSLMEVLPTELSSTQHGWSKIGSLLAGFAVSAVVS 297
LAAYALGAS++++G S + + AFS TPIGI G + ++ + +GA ALA+GTFLYV+ MEV+P EL+ +H K+ L G+ + ++++
Sbjct: 335 LAAYALGASIVESGASSTRFWTVISAFSLATPIGIFSGFAMSSNANNSKSGAALSALASGTFLYVAFMEVIPKELADGKHRALKMLVFLIGYGLMSMLA 433
BLAST of mRNA_M-pyrifera_M_contig11602.3330.1 vs. uniprot
Match: A0A7J6MSZ9_PERCH (Uncharacterized protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MSZ9_PERCH) HSP 1 Score: 79.7 bits (195), Expect = 3.340e-15 Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 1
Query: 1 LAAYALGASLMQTGVSGEQLTGFVVAFSAMTPIGILLGDL-IENDGEDDTAG---ATCVALAAGTFLYVSLMEVLPTELSSTQHGWSKIGSLLAGFAVSAVVS-WL 303
LAA+ALG S +++GVS ++ + F+A TPIG L GD+ +G TA A C ALAAGTFL VS ME++P +S + +SK+ ++L GF AV++ W+
Sbjct: 930 LAAFALGCSFVESGVSDKRFVTLGLIFAAGTPIGALFGDIGYSAEGNKHTAAVFSAVCKALAAGTFLQVSSMEIIPQVFASAEGRFSKLSAVLVGFGAMAVLALWI 1035
BLAST of mRNA_M-pyrifera_M_contig11602.3330.1 vs. uniprot
Match: A0A3R7GT88_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GT88_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 5.200e-15 Identity = 45/114 (39.47%), Postives = 71/114 (62.28%), Query Frame = 1
Query: 1 LAAYALGASLMQTGVSGEQLTGFVVAFSAMTPIGILLGDLIENDGEDDTAGA-TCVALAAGTFLYVSLMEVLPTELSSTQHGW--------------SKIGSLLAGFAVSAVVS 297
LAA+ALG+ L+Q+ + Q+T ++V FS M+ IGI++G +I D +D+A A CVALA+GTF+YV++MEV+P E HG K +L+AG+A+ +++
Sbjct: 195 LAAFALGSGLVQSAMPVAQVTLYMVVFSFMSIIGIIIGWIIAADSSEDSAAAGICVALASGTFIYVAVMEVIPQEFPRHSHGGHGDHGHQPKNTLTIQKTIALVAGYAIFGLLA 308
BLAST of mRNA_M-pyrifera_M_contig11602.3330.1 vs. uniprot
Match: C5KL75_PERM5 (Uncharacterized protein n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KL75_PERM5) HSP 1 Score: 78.6 bits (192), Expect = 6.030e-15 Identity = 44/106 (41.51%), Postives = 69/106 (65.09%), Query Frame = 1
Query: 1 LAAYALGASLMQTGVSGEQLTGFVVAFSAMTPIGILLGDLIENDGEDDTAGA----TCVALAAGTFLYVSLMEVLPTELSSTQHGWSKIGSLLAGFAVSAVVS-WL 303
LAA+ALG SL+++ VSG + + + F+A TP+G LLG++ + G+ A A TC ALA+GTFL VS ME++P +S + +SK+ ++L GF A ++ W+
Sbjct: 274 LAAFALGCSLVESTVSGRRFFVYSLIFAAGTPVGALLGNIGISSGKSVHAAAVFTATCKALASGTFLQVSSMEIIPQVFASAEGRFSKLTAILVGFGAMATLAVWI 379
BLAST of mRNA_M-pyrifera_M_contig11602.3330.1 vs. uniprot
Match: A0A150GMX7_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GMX7_GONPE) HSP 1 Score: 78.2 bits (191), Expect = 9.460e-15 Identity = 41/99 (41.41%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 1 LAAYALGASLMQTGVSGEQLTGFVVAFSAMTPIGILLGDLIENDGEDDTAGATCVALAAGTFLYVSLMEVLPTELSSTQHGWSKIGSLLAGFAVSAVVS 297
LAAYALGAS++++G S + + FS TPIGI G + + +GA ALA+GTFLYV+ MEV+P EL+ +H +K+G+ L G+ + ++++
Sbjct: 314 LAAYALGASIVESGASSNRFWTVIGCFSMATPIGIFAGYGMSS-AASSKSGAALSALASGTFLYVAFMEVIPKELADGRHRAAKMGAFLLGYGLMSLLA 411 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11602.3330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11602.3330.1 >prot_M-pyrifera_M_contig11602.3330.1 ID=prot_M-pyrifera_M_contig11602.3330.1|Name=mRNA_M-pyrifera_M_contig11602.3330.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp MQTGVSGEQLTGFVVAFSAMTPIGILLGDLIENDGEDDTAGATCVALAAGback to top mRNA from alignment at M-pyrifera_M_contig11602:995..1306+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11602.3330.1 ID=mRNA_M-pyrifera_M_contig11602.3330.1|Name=mRNA_M-pyrifera_M_contig11602.3330.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=312bp|location=Sequence derived from alignment at M-pyrifera_M_contig11602:995..1306+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11602:995..1306+ >mRNA_M-pyrifera_M_contig11602.3330.1 ID=mRNA_M-pyrifera_M_contig11602.3330.1|Name=mRNA_M-pyrifera_M_contig11602.3330.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig11602:995..1306+ (Macrocystis pyrifera P11B4 male)back to top |