prot_M-pyrifera_M_contig115795.3270.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig115795.3270.1
Unique Nameprot_M-pyrifera_M_contig115795.3270.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length165
Homology
BLAST of mRNA_M-pyrifera_M_contig115795.3270.1 vs. uniprot
Match: UPI0018D7F0D9 (LacI family transcriptional regulator n=2 Tax=Thiosulfatihalobacter marinus TaxID=2792481 RepID=UPI0018D7F0D9)

HSP 1 Score: 164 bits (414), Expect = 1.200e-46
Identity = 87/165 (52.73%), Postives = 110/165 (66.67%), Query Frame = 0
Query:    1 MVMETQFDPAEQEKKIEDALSWRPDGIIFAGDTISSRSRHLIKSNGSRFVEAWAASDDVVDVNIGLSHKEAARRVAAGLAEAGYQRIAFAVRLLGYRVEAERLEGYRLAMREAGLPTCEFEGSSRTSPYQSGADLFAKAWENTPRPDAVFFAGDLLAVGALFEAQ 165
            MV ET+F    QEK+IE A+ WRPDGIIF GDT+S RSR  I ++G  FVEAWAASD  V V+IGLSH+  A ++   L  AGYQ +AF VR LGYRVE ERL+GY  A+  AG      + +     Y++GA +  +A + T RPDA+F AGD+LA GA+FE  
Sbjct:   99 MVFETRFSLEMQEKRIEAAIGWRPDGIIFVGDTVSDRSRRQITASGIPFVEAWAASDTPVGVDIGLSHRAIAAQMTGALIGAGYQTVAFGVRRLGYRVEVERLDGYLDAVSSAGRTPLVVDIADPGEHYKAGAMILRQALDLTSRPDALFLAGDVLAAGAIFECH 263          
BLAST of mRNA_M-pyrifera_M_contig115795.3270.1 vs. uniprot
Match: UPI001D0A696F (substrate-binding domain-containing protein n=1 Tax=Roseobacter sp. H9 TaxID=2763262 RepID=UPI001D0A696F)

HSP 1 Score: 94.4 bits (233), Expect = 6.620e-21
Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = 0
Query:   18 DALSWRPDGIIFAGDTISSRSRHLIKSNGSRFVEAWAASDDVVDVNIGLSHKEAARRVAAGLAEAGYQRIAFAVRLLGYRVEAERLEGYRLAMREAGLPTCEFEGSSRTSPYQSGADLFAKAWENTPRPDAVFFAGDLLAVGALFEAQ 165
            DA+S++  G + A      +   LI  N SRFVEAWA +D+ VD++IG+S+ +AA   A  L       +AFA R LGY +E  R +GYR A+ +       +   +    + +GA+L  +   +  R  +V FAGD++AVGALFEAQ
Sbjct:    7 DAMSFKTPGALLA------KGPFLIARNPSRFVEAWAFTDNPVDISIGVSNFDAAHMAAEALLAKQSGAVAFAARRLGYAIERHREDGYRTAVSDVAQDPIVYTVEAVRPAFAAGAELMRQVMGDD-RVKSVLFAGDVIAVGALFEAQ 147          
BLAST of mRNA_M-pyrifera_M_contig115795.3270.1 vs. uniprot
Match: UPI00039E74B8 (LacI family DNA-binding transcriptional regulator n=1 Tax=Deinococcus aquatilis TaxID=519440 RepID=UPI00039E74B8)

HSP 1 Score: 94.0 bits (232), Expect = 9.920e-20
Identity = 60/167 (35.93%), Postives = 87/167 (52.10%), Query Frame = 0
Query:    5 TQFDPAEQEKKIEDALSWRPDGIIFAGDTISSRSRHLIKSNGSRFVEAWAASDDV-----VDVNIGLSHKEAARRVAAGLAEAGYQRIAFAVRLLGYRVEA-ERLEGYRLAMREAGLPTCEFEGSSRTSPYQSGADLFAKAWENTPRPDAVFFAGDLLAVGALFEAQ 165
            T++   ++EK +E  L WRP GII +G   S R+  L++++G   VE    ++       +D+NIG SH      V   LA  GY++IA+A  L      +  R+ G++ A++  GLP  +   S + S    G DL +      P  DAVFFA D LA GALFE Q
Sbjct:  113 TEYSREKEEKLVEVFLGWRPSGIILSGIDHSERTARLLRASGVPVVETMDLAEPEQAGLPLDLNIGFSHYRVGEAVVEYLAACGYRQIAYAGTLTELDPRSVRRIRGFQNALKRLGLPHHQIGRSDQPSSLAVGRDLLSGLLAEHPTLDAVFFANDELAAGALFECQ 279          
BLAST of mRNA_M-pyrifera_M_contig115795.3270.1 vs. uniprot
Match: UPI001EF0649F (LacI family DNA-binding transcriptional regulator n=2 Tax=Deinococcus TaxID=1298 RepID=UPI001EF0649F)

HSP 1 Score: 93.6 bits (231), Expect = 1.320e-19
Identity = 61/171 (35.67%), Postives = 87/171 (50.88%), Query Frame = 0
Query:    1 MVMETQFDPAEQEKKIEDALSWRPDGIIFAGDTISSRSRHLIKSNGSRFVEAWAASD-----DVVDVNIGLSHKEAARRVAAGLAEAGYQRIAFAVRLLGYRVEA-ERLEGYRLAMREAGLPTCEFEGSSRTSPYQSGADLFAKAWENTPRPDAVFFAGDLLAVGALFEAQ 165
            M+  T++   ++E  +E  L WRP  I+ +G   S R+  L++++G   VE    +D       +D+NIG SH      V   LA  GY+ IA+A  L      +  R++G++ A++  GLP      S   S    G DL A   E  P+ DAVFFA D LA GALFE Q
Sbjct:  100 MLGSTEYSREKEETLVEVFLGWRPSAIVLSGIDHSERTVRLLRASGVPVVEIMDLADGNDTAQPLDLNIGFSHSRVGEAVVTYLAACGYRNIAYAGTLTTLDPRSVRRIQGFQGALKRLGLPHHLIGRSDLPSSLAVGRDLLAGLLEEFPQTDAVFFANDELAAGALFECQ 270          
BLAST of mRNA_M-pyrifera_M_contig115795.3270.1 vs. uniprot
Match: UPI0019C86160 (LacI family DNA-binding transcriptional regulator n=1 Tax=Deinococcus aquiradiocola TaxID=393059 RepID=UPI0019C86160)

HSP 1 Score: 92.0 bits (227), Expect = 5.070e-19
Identity = 61/171 (35.67%), Postives = 82/171 (47.95%), Query Frame = 0
Query:    1 MVMETQFDPAEQEKKIEDALSWRPDGIIFAGDTISSRSRHLIKSNGSRFVEAW-----AASDDVVDVNIGLSHKEAARRVAAGLAEAGYQRIAFAVRLLGYRVEA-ERLEGYRLAMREAGLPTCEFEGSSRTSPYQSGADLFAKAWENTPRPDAVFFAGDLLAVGALFEAQ 165
            M+  T++   ++EK +E  L WRP GI+ +G   S R+  L+KS G   VE       +     +D+NIG SH      V   LA  GY+ +A+A  L      +  R+ G++ A+   GLP      S   S    G DL        P  DAVFFA D LA GALFE Q
Sbjct:  109 MLGSTEYSREKEEKLVEVFLGWRPSGIVLSGIDHSERTVRLLKSAGIPVVEIMDLAVASEQSQALDLNIGFSHAVVGEAVVRYLASCGYRHVAYAGTLTELDPRSVRRIHGFQTALMRLGLPHHLIGRSDLPSSLAVGRDLVTDLLHRHPEMDAVFFANDELAAGALFECQ 279          
BLAST of mRNA_M-pyrifera_M_contig115795.3270.1 vs. uniprot
Match: A0A1U7NSX4_9DEIO (Gluconate utilization system Gnt-I transcriptional repressor n=2 Tax=Deinococcus marmoris TaxID=249408 RepID=A0A1U7NSX4_9DEIO)

HSP 1 Score: 90.1 bits (222), Expect = 2.510e-18
Identity = 55/171 (32.16%), Postives = 86/171 (50.29%), Query Frame = 0
Query:    1 MVMETQFDPAEQEKKIEDALSWRPDGIIFAGDTISSRSRHLIKSNGSRFVEAW-----AASDDVVDVNIGLSHKEAARRVAAGLAEAGYQRIAFAVRLLGYRVEA-ERLEGYRLAMREAGLPTCEFEGSSRTSPYQSGADLFAKAWENTPRPDAVFFAGDLLAVGALFEAQ 165
            M+  T++ PA +E+ +E  L WRP  ++ +G   + R+  L++++G   VE         +   +D+NIG SH       A  LA  GY++IA+A  L      +  R++G++  + +  LP      S + S    G +L      + P  DAVFFA D LA GALFE Q
Sbjct:  110 MLGSTEYSPAREEQLVEAFLGWRPSAVVLSGLDHTERTSRLLRASGVPVVEIMDLAVEGETGQALDLNIGFSHTRVGEAAATYLARCGYRQIAYAGTLTTLDPRSVRRIQGFQTGLAQLKLPPHLIGRSDQPSSLAVGRELLLSLRRDFPEVDAVFFANDELAAGALFECQ 280          
BLAST of mRNA_M-pyrifera_M_contig115795.3270.1 vs. uniprot
Match: A0A833LK20_9HYPH (LacI family DNA-binding transcriptional regulator n=1 Tax=Bauldia sp. TaxID=2575872 RepID=A0A833LK20_9HYPH)

HSP 1 Score: 90.1 bits (222), Expect = 2.510e-18
Identity = 57/165 (34.55%), Postives = 88/165 (53.33%), Query Frame = 0
Query:    1 MVMETQFDPAEQEKKIEDALSWRPDGIIFAGDTISSRSRHLIKSNGSRFVEAWAASDDVVDVNIGLSHKEAARRVAAGLAEAGYQRIAFAVRLLGYRVEAERLEGYRLAMREAGLPTCEFEGSSRTSPYQSGADLFAKAWENTPRPDAVFFAGDLLAVGALFEAQ 165
            +V+ +++   E+EK +   L   P+ +I  G   ++R+R L++ +G   V+    +D  +D+NIGLS ++AA      L   GY+RIA     L  R    RLEG+R A RE+G+       + R S  + G  LF +  +  P  DAVF   D LA+G+LFE Q
Sbjct:  106 LVLNSRYSAEEEEKAVVTLLGHHPEAMIVVGVDQTARTRMLLEQSGVPVVQTMELADAPIDINIGLSQRDAAFAATRYLLGCGYRRIANMTAPLDARAR-RRLEGFRGACRESGVADEMVATAPRQSSVKLGVALFTELIDRWPDVDAVFCGNDNLALGSLFECQ 269          
BLAST of mRNA_M-pyrifera_M_contig115795.3270.1 vs. uniprot
Match: UPI001E45424D (LacI family DNA-binding transcriptional regulator n=1 Tax=Roseomonas sp. CECT 9278 TaxID=2845823 RepID=UPI001E45424D)

HSP 1 Score: 88.2 bits (217), Expect = 1.230e-17
Identity = 59/166 (35.54%), Postives = 84/166 (50.60%), Query Frame = 0
Query:    1 MVMETQFDPAEQEKKIEDALSWRPDGIIFAGDTISSRSRHLIKSNGSRFVEAWAASDDVVDVNIGLSHKEAARRVAAGLAEAGYQRIAFAVRLLGYRVEA-ERLEGYRLAMREAGLPTCEFEGSSRTSPYQSGADLFAKAWENTPRPDAVFFAGDLLAVGALFEAQ 165
            MV ++ + P E+E  +   L+ R  G++    T +   R LI+ +G   VE    +DD +D+ +  S+ +AAR +   L   GY+RIA     L     + ER  G+  A+ EAGLP              SG +   +  E TP  DAVFFAGD+LAVGAL E Q
Sbjct:  118 MVADSAYSPQEEEALVTAFLAQRVAGLVLHNTTHTPALRALIRRSGVPVVENGTLADDPLDMVVSYSNVDAARAMTLHLVRLGYRRIALVTLPLANNERSLERRRGHAAALAEAGLPADPRIMLEMPPGLPSGCEAIMRLLEITPAVDAVFFAGDVLAVGALLECQ 283          
BLAST of mRNA_M-pyrifera_M_contig115795.3270.1 vs. uniprot
Match: A0A0S1Y3J6_9BORD (LacI family transcriptional regulator n=2 Tax=Bordetella sp. N TaxID=1746199 RepID=A0A0S1Y3J6_9BORD)

HSP 1 Score: 88.2 bits (217), Expect = 1.300e-17
Identity = 59/156 (37.82%), Postives = 86/156 (55.13%), Query Frame = 0
Query:   11 EQEKKIEDALSWRPDGIIFAGDTISSRSRHLIKSNGSRFVEAWAASDDVVDVNIGLSHKEAARRVAAGLAEAGYQRIAF-AVRLLGYRVEAERLEGYRLAMREAGLPTCEFEGSSRTSPYQSGADLFAKAWENTPRPDAVFFAGDLLAVGALFEAQ 165
            E+E  +   LS R  G+I  G   + R+  ++K+ G   +E      D +D+ +  S+ EAA  +   LA  GY+RIAF ++     R  +ERL GY  A++ AGL           S   SGA++ ++  + TP  DAVFFAGD+LA+GALFEAQ
Sbjct:  135 EEESLVGAMLSQRVCGLILHGTEHTPRALTIMKNAGIPIIETGDIPADPIDMAVSYSNAEAASAMTLHLARRGYKRIAFVSLDTKTNRRASERLRGYLAALKSAGLRKDPRLIREAESGIASGAEVMSQLMKVTPAVDAVFFAGDVLALGALFEAQ 290          
BLAST of mRNA_M-pyrifera_M_contig115795.3270.1 vs. uniprot
Match: A0A7V8TRZ1_9GAMM (LacI family DNA-binding transcriptional regulator n=1 Tax=Ectothiorhodospiraceae bacterium WFHF3C12 TaxID=1914406 RepID=A0A7V8TRZ1_9GAMM)

HSP 1 Score: 87.4 bits (215), Expect = 1.850e-17
Identity = 58/163 (35.58%), Postives = 85/163 (52.15%), Query Frame = 0
Query:    5 TQFDPAEQEKKIEDALSWRPDGIIFAGDTISSRSRHLIKSNGSRFVEAWAASDDVVDVNIGLSHKEAARRVAAGLAEAGYQRIAFAVRLLGYRVEAE-RLEGYRLAMREAGLPT-CEFEGSSRTSPYQSGADLFAKAWENTPRPDAVFFAGDLLAVGALFEAQ 165
            T +   E+ + +   L+ RP G++  G    S+   L+++     VE W    D VD+ +G S+ EA R + A LA  G +RI F          AE RL GYR A+RE GL T    E  ++ S + +GA+   +     P  +A+FFA D+LA+GALFE Q
Sbjct:   94 TGYSLREESRLVGAILAQRPAGLLATGLQHESQGLTLLRTTDIPIVETWNVDGDPVDMAVGFSNFEACRAMVATLARRGARRIGFVSAPTTANDRAEQRLRGYRHAVRELGLDTDARLEREAKFS-FHAGAERLVEMIAERPDVEAIFFANDILAIGALFECQ 255          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115795.3270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0018D7F0D91.200e-4652.73LacI family transcriptional regulator n=2 Tax=Thio... [more]
UPI001D0A696F6.620e-2138.51substrate-binding domain-containing protein n=1 Ta... [more]
UPI00039E74B89.920e-2035.93LacI family DNA-binding transcriptional regulator ... [more]
UPI001EF0649F1.320e-1935.67LacI family DNA-binding transcriptional regulator ... [more]
UPI0019C861605.070e-1935.67LacI family DNA-binding transcriptional regulator ... [more]
A0A1U7NSX4_9DEIO2.510e-1832.16Gluconate utilization system Gnt-I transcriptional... [more]
A0A833LK20_9HYPH2.510e-1834.55LacI family DNA-binding transcriptional regulator ... [more]
UPI001E45424D1.230e-1735.54LacI family DNA-binding transcriptional regulator ... [more]
A0A0S1Y3J6_9BORD1.300e-1737.82LacI family transcriptional regulator n=2 Tax=Bord... [more]
A0A7V8TRZ1_9GAMM1.850e-1735.58LacI family DNA-binding transcriptional regulator ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 69..165
e-value: 3.5E-17
score: 64.9
NoneNo IPR availablePANTHERPTHR30146LACI-RELATED TRANSCRIPTIONAL REPRESSORcoord: 1..165
NoneNo IPR availablePANTHERPTHR30146:SF2HTH-TYPE TRANSCRIPTIONAL REGULATOR GNTRcoord: 1..165
IPR001761Periplasmic binding protein/LacI sugar binding domainPFAMPF00532Peripla_BP_1coord: 8..163
e-value: 1.8E-10
score: 40.8
IPR028082Periplasmic binding protein-like ISUPERFAMILY53822Periplasmic binding protein-like Icoord: 3..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115795contigM-pyrifera_M_contig115795:3..497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115795.3270.1mRNA_M-pyrifera_M_contig115795.3270.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig115795 3..512 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig115795.3270.1 ID=prot_M-pyrifera_M_contig115795.3270.1|Name=mRNA_M-pyrifera_M_contig115795.3270.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp
MVMETQFDPAEQEKKIEDALSWRPDGIIFAGDTISSRSRHLIKSNGSRFV
EAWAASDDVVDVNIGLSHKEAARRVAAGLAEAGYQRIAFAVRLLGYRVEA
ERLEGYRLAMREAGLPTCEFEGSSRTSPYQSGADLFAKAWENTPRPDAVF
FAGDLLAVGALFEAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001761Peripla_BP/Lac1_sug-bd_dom
IPR028082Peripla_BP_I