prot_M-pyrifera_M_contig115282.3179.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig115282.3179.1
Unique Name	prot_M-pyrifera_M_contig115282.3179.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	100

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig115282.3179.1 vs. uniprot
Match: A0A495IQ27_MARNT (DNA-binding transcriptional LysR family regulator n=28 Tax=Bacteria TaxID=2 RepID=A0A495IQ27_MARNT)

HSP 1 Score: 193 bits (490), Expect = 2.170e-59
Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 0

Query:    1 MRADHPLAGRQITMEEFLQARHLLVTMSGDAHGFVDSYLDQKGQNRRIAATVNHFSIVPQVLRDSNLIAAVPELISQDCGFVDGLWMGQLPFEVDPTSL 99
            MRADHPLAGRQITMEEFL+ARHLLVTMSGDAHGFVDSYLDQKG +RRIAATVNHFSIVPQ+LR+SNLI AVPELISQDCGFVDGLWMGQLPFEVDPTSL
Sbjct:  172 MRADHPLAGRQITMEEFLEARHLLVTMSGDAHGFVDSYLDQKGCSRRIAATVNHFSIVPQILRESNLITAVPELISQDCGFVDGLWMGQLPFEVDPTSL 270

[Close]

BLAST of mRNA_M-pyrifera_M_contig115282.3179.1 vs. uniprot
Match: W5YUI2_9GAMM (HTH-type transcriptional regulator LeuO n=8 Tax=Marinobacter TaxID=2742 RepID=W5YUI2_9GAMM)

HSP 1 Score: 188 bits (477), Expect = 1.880e-57
Identity = 90/99 (90.91%), Postives = 97/99 (97.98%), Query Frame = 0

Query:    1 MRADHPLAGRQITMEEFLQARHLLVTMSGDAHGFVDSYLDQKGQNRRIAATVNHFSIVPQVLRDSNLIAAVPELISQDCGFVDGLWMGQLPFEVDPTSL 99
            MRADHPLAGRQITMEEFL+ARHLLVTMSGDAHG VDSYLDQKGQ+RRIAAT+NHF+ VPQVLR+SNLIAAVPELISQDCGFVDGLWMG+LPF+VDPTSL
Sbjct:  172 MRADHPLAGRQITMEEFLEARHLLVTMSGDAHGSVDSYLDQKGQSRRIAATMNHFASVPQVLRESNLIAAVPELISQDCGFVDGLWMGELPFDVDPTSL 270

[Close]

BLAST of mRNA_M-pyrifera_M_contig115282.3179.1 vs. uniprot
Match: UPI000A760DBA (LysR substrate-binding domain-containing protein n=1 Tax=Marinobacter similis TaxID=1420916 RepID=UPI000A760DBA)

HSP 1 Score: 185 bits (469), Expect = 3.610e-57
Identity = 87/99 (87.88%), Postives = 95/99 (95.96%), Query Frame = 0

Query:    1 MRADHPLAGRQITMEEFLQARHLLVTMSGDAHGFVDSYLDQKGQNRRIAATVNHFSIVPQVLRDSNLIAAVPELISQDCGFVDGLWMGQLPFEVDPTSL 99
            MR DHPLAGR ITMEEFL ARHLLV+MSG+AHGFVDSYLDQKGQ+RRIA TVNHFSIVPQ+LRD+NLIAAVPELISQDCGFV+GLWMG+LPFE+DPTSL
Sbjct:   98 MREDHPLAGRPITMEEFLSARHLLVSMSGEAHGFVDSYLDQKGQSRRIATTVNHFSIVPQILRDTNLIAAVPELISQDCGFVNGLWMGELPFEIDPTSL 196

[Close]

BLAST of mRNA_M-pyrifera_M_contig115282.3179.1 vs. uniprot
Match: UPI00119D6696 (LysR family transcriptional regulator n=2 Tax=Marinobacter TaxID=2742 RepID=UPI00119D6696)

HSP 1 Score: 185 bits (469), Expect = 2.490e-56
Identity = 88/99 (88.89%), Postives = 96/99 (96.97%), Query Frame = 0

Query:    1 MRADHPLAGRQITMEEFLQARHLLVTMSGDAHGFVDSYLDQKGQNRRIAATVNHFSIVPQVLRDSNLIAAVPELISQDCGFVDGLWMGQLPFEVDPTSL 99
            MR DHPLAG++ITMEEFL+ARHLLVTMSGDAHGFVDSYLDQKG +RRIA TVNHFSIVPQVLR++NLIAAVPELISQDCGFV+GLWMG+LPFEVDPTSL
Sbjct:  172 MREDHPLAGKKITMEEFLEARHLLVTMSGDAHGFVDSYLDQKGLSRRIATTVNHFSIVPQVLRETNLIAAVPELISQDCGFVNGLWMGELPFEVDPTSL 270

[Close]

BLAST of mRNA_M-pyrifera_M_contig115282.3179.1 vs. uniprot
Match: A0A495IQT5_MARNT (DNA-binding transcriptional LysR family regulator n=7 Tax=Proteobacteria TaxID=1224 RepID=A0A495IQT5_MARNT)

HSP 1 Score: 185 bits (469), Expect = 3.110e-56
Identity = 88/99 (88.89%), Postives = 96/99 (96.97%), Query Frame = 0

Query:    1 MRADHPLAGRQITMEEFLQARHLLVTMSGDAHGFVDSYLDQKGQNRRIAATVNHFSIVPQVLRDSNLIAAVPELISQDCGFVDGLWMGQLPFEVDPTSL 99
            MRADHPLAGRQITMEEFL+ARHLLV+MSGDAHGFVDSYLDQKG +RRIAATVNHFS VP VLR++NLIAAVPELISQDCGFV+GLWMG+LPF+VDPTSL
Sbjct:  172 MRADHPLAGRQITMEEFLEARHLLVSMSGDAHGFVDSYLDQKGMSRRIAATVNHFSTVPAVLRETNLIAAVPELISQDCGFVNGLWMGELPFDVDPTSL 270

[Close]

BLAST of mRNA_M-pyrifera_M_contig115282.3179.1 vs. uniprot
Match: A0A2A5M0X4_9GAMM (LysR family transcriptional regulator n=1 Tax=Marinobacter sp. ANT_B65 TaxID=2039467 RepID=A0A2A5M0X4_9GAMM)

HSP 1 Score: 183 bits (464), Expect = 1.720e-55
Identity = 84/99 (84.85%), Postives = 98/99 (98.99%), Query Frame = 0

Query:    1 MRADHPLAGRQITMEEFLQARHLLVTMSGDAHGFVDSYLDQKGQNRRIAATVNHFSIVPQVLRDSNLIAAVPELISQDCGFVDGLWMGQLPFEVDPTSL 99
            MRADHPLAG+QITM+EFL+ARHLLV+MSGDAHGFVDSYLDQKG++RRIAATVNHFSIVP++LR++NLIA+VPE+ISQDCGFV+GLWMG LPF+VDPTSL
Sbjct:  172 MRADHPLAGKQITMDEFLEARHLLVSMSGDAHGFVDSYLDQKGKSRRIAATVNHFSIVPEILRETNLIASVPEMISQDCGFVNGLWMGDLPFDVDPTSL 270

[Close]

BLAST of mRNA_M-pyrifera_M_contig115282.3179.1 vs. uniprot
Match: UPI001F281FF4 (LysR substrate-binding domain-containing protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI001F281FF4)

HSP 1 Score: 182 bits (461), Expect = 2.440e-55
Identity = 86/99 (86.87%), Postives = 95/99 (95.96%), Query Frame = 0

Query:    1 MRADHPLAGRQITMEEFLQARHLLVTMSGDAHGFVDSYLDQKGQNRRIAATVNHFSIVPQVLRDSNLIAAVPELISQDCGFVDGLWMGQLPFEVDPTSL 99
            MRADHPLAGR ITM+EFL ARHLLVTMSGDAHGFVDSYLDQKG +RRIA+TVNHFSIVP++LR+S+LIAAVPELISQDCGFV+GLWMG+LPF VDPTSL
Sbjct:  145 MRADHPLAGRPITMDEFLSARHLLVTMSGDAHGFVDSYLDQKGHSRRIASTVNHFSIVPKILRESDLIAAVPELISQDCGFVNGLWMGELPFSVDPTSL 243

[Close]

BLAST of mRNA_M-pyrifera_M_contig115282.3179.1 vs. uniprot
Match: A0A2E9SS20_9GAMM (LysR family transcriptional regulator n=6 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E9SS20_9GAMM)

HSP 1 Score: 180 bits (457), Expect = 2.060e-54
Identity = 86/99 (86.87%), Postives = 94/99 (94.95%), Query Frame = 0

Query:    1 MRADHPLAGRQITMEEFLQARHLLVTMSGDAHGFVDSYLDQKGQNRRIAATVNHFSIVPQVLRDSNLIAAVPELISQDCGFVDGLWMGQLPFEVDPTSL 99
            MRADHPLAGR ITM+EFL ARHLLVTMSGDAHGFVDSYLDQKG +RRIA+TVNHFSIVP++LR S+LIAAVPELISQDCGFV+GLWMG+LPF VDPTSL
Sbjct:  172 MRADHPLAGRPITMDEFLSARHLLVTMSGDAHGFVDSYLDQKGHSRRIASTVNHFSIVPKILRASDLIAAVPELISQDCGFVNGLWMGELPFSVDPTSL 270

[Close]

BLAST of mRNA_M-pyrifera_M_contig115282.3179.1 vs. uniprot
Match: A0A094IKY3_9GAMM (Transcriptional regulator n=8 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A094IKY3_9GAMM)

HSP 1 Score: 178 bits (452), Expect = 1.100e-53
Identity = 84/99 (84.85%), Postives = 95/99 (95.96%), Query Frame = 0

Query:    1 MRADHPLAGRQITMEEFLQARHLLVTMSGDAHGFVDSYLDQKGQNRRIAATVNHFSIVPQVLRDSNLIAAVPELISQDCGFVDGLWMGQLPFEVDPTSL 99
            MR  HPLAG+ ITMEEFL+ARHLLV+MSGDAHGFVDSYL+QKGQ+RRIAATVNHFSI+P VLR++NLIAAVPELISQDCGFV+GLWMG+LPFEVDPTS+
Sbjct:  172 MREGHPLAGKPITMEEFLEARHLLVSMSGDAHGFVDSYLNQKGQSRRIAATVNHFSIMPHVLRETNLIAAVPELISQDCGFVNGLWMGELPFEVDPTSM 270

[Close]

BLAST of mRNA_M-pyrifera_M_contig115282.3179.1 vs. uniprot
Match: A0A1S2CI47_9GAMM (Transcriptional regulator n=1 Tax=Marinobacter sp. AC-23 TaxID=1879031 RepID=A0A1S2CI47_9GAMM)

HSP 1 Score: 176 bits (447), Expect = 5.620e-53
Identity = 82/99 (82.83%), Postives = 93/99 (93.94%), Query Frame = 0

Query:    1 MRADHPLAGRQITMEEFLQARHLLVTMSGDAHGFVDSYLDQKGQNRRIAATVNHFSIVPQVLRDSNLIAAVPELISQDCGFVDGLWMGQLPFEVDPTSL 99
            MR DHPLAG+ ITME+FL ARHLLV+MSGDAHGFVD+YLD+KGQ+RRIAATVNHFSIVP +LR S+LIAAVPELISQDCGF+DGLW+G+LPF VDPTSL
Sbjct:  172 MREDHPLAGKTITMEQFLAARHLLVSMSGDAHGFVDNYLDEKGQSRRIAATVNHFSIVPNILRQSDLIAAVPELISQDCGFIDGLWLGELPFPVDPTSL 270

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig115282.3179.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig115282.3179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A495IQ27_MARNT	2.170e-59	93.94	DNA-binding transcriptional LysR family regulator ...	[more]
W5YUI2_9GAMM	1.880e-57	90.91	HTH-type transcriptional regulator LeuO n=8 Tax=Ma...	[more]
UPI000A760DBA	3.610e-57	87.88	LysR substrate-binding domain-containing protein n...	[more]
UPI00119D6696	2.490e-56	88.89	LysR family transcriptional regulator n=2 Tax=Mari...	[more]
A0A495IQT5_MARNT	3.110e-56	88.89	DNA-binding transcriptional LysR family regulator ...	[more]
A0A2A5M0X4_9GAMM	1.720e-55	84.85	LysR family transcriptional regulator n=1 Tax=Mari...	[more]
UPI001F281FF4	2.440e-55	86.87	LysR substrate-binding domain-containing protein n...	[more]
A0A2E9SS20_9GAMM	2.060e-54	86.87	LysR family transcriptional regulator n=6 Tax=Gamm...	[more]
A0A094IKY3_9GAMM	1.100e-53	84.85	Transcriptional regulator n=8 Tax=Gammaproteobacte...	[more]
A0A1S2CI47_9GAMM	5.620e-53	82.83	Transcriptional regulator n=1 Tax=Marinobacter sp....	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.190.10		coord: 1..95 e-value: 1.8E-24 score: 88.1
None	No IPR available	PANTHER	PTHR30118:SF15		coord: 1..98
None	No IPR available	PANTHER	PTHR30118	HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO-RELATED	coord: 1..98
None	No IPR available	SUPERFAMILY	53850	Periplasmic binding protein-like II	coord: 1..97

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig115282	contig	M-pyrifera_M_contig115282:39..338 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig115282.3179.1	mRNA_M-pyrifera_M_contig115282.3179.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig115282 3..476 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig115282.3179.1 ID=prot_M-pyrifera_M_contig115282.3179.1|Name=mRNA_M-pyrifera_M_contig115282.3179.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=100bp
MRADHPLAGRQITMEEFLQARHLLVTMSGDAHGFVDSYLDQKGQNRRIAA
TVNHFSIVPQVLRDSNLIAAVPELISQDCGFVDGLWMGQLPFEVDPTSL*