mRNA_M-pyrifera_M_contig115141.3153.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115141.3153.1 vs. uniprot
Match: A0A8J4UYA2_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UYA2_9MYCE) HSP 1 Score: 104 bits (259), Expect = 3.020e-23 Identity = 60/145 (41.38%), Postives = 85/145 (58.62%), Query Frame = 1
Query: 1 GELESKIVLYFNSTARVAKFYLDLAPEKNREKRLDAKQVGNIFPCVKRDVKDIIHCLGGIKVLLPLFAQLDQPLAPNN----PGEEI--DYTTDTQYILQALALLGDMLGKSDTNEREMERCQGFPIIGFLLEKAVPEHFTSETL 417
L S + L +N A LD P+ ++ DA V +I PCV RD+KDII+CLGGIKVL PL Q++Q + PN+ P E+ T +++ Q LAL DML S+ + EM RCQGF ++G+LL++ PE+ T +L
Sbjct: 1547 SSLTSHLFLNYNCRAIDGDLCLDNTPDIGGDRNYDAVLV-SINPCVSRDIKDIIYCLGGIKVLFPLIPQINQSIDPNSLSMIPDEDNFKTVTNNSKLTFQVLALFKDMLRGSEAIQEEMLRCQGFSVMGYLLQQITPENLTLGSL 1690
BLAST of mRNA_M-pyrifera_M_contig115141.3153.1 vs. uniprot
Match: UPI0006451263 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006451263) HSP 1 Score: 103 bits (258), Expect = 4.110e-23 Identity = 55/137 (40.15%), Postives = 77/137 (56.20%), Query Frame = 1
Query: 7 LESKIVLYFNSTARVAKFYLDLAPEKNREKRLDAKQVGNIFPCVKRDVKDIIHCLGGIKVLLPLFAQLDQPLAPNNPGEEIDYTTDTQYILQALALLGDMLGKSDTNEREMERCQGFPIIGFLLEKAVPEHFTSETL 417
L S++ L +N A LD P ++ D + ++ PCV RD+KDII+CLGGIKVL PL Q++Q L P D T + I+Q L L DML S+ N+ EM RC G P++ +LL+ PE+ T+ L
Sbjct: 1301 LTSRLFLSYNCRAIEGDQCLDTTPNIGADRHFDGT-LHSVHPCVSRDIKDIIYCLGGIKVLFPLLPQMNQQLLQQQPENATD--TANKLIIQILGLFRDMLRGSEANQEEMLRCNGMPVLAYLLQMLPPEYITTGVL 1434
BLAST of mRNA_M-pyrifera_M_contig115141.3153.1 vs. uniprot
Match: D3BT75_POLPP (BEACH domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BT75_POLPP) HSP 1 Score: 100 bits (250), Expect = 4.910e-22 Identity = 55/133 (41.35%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 7 LESKIVLYFNSTARVAKFYLDLAPEKNREKRLDAKQVGNIFPCVKRDVKDIIHCLGGIKVLLPLFAQLDQPLAPNNPGEEIDYTTDTQYILQALALLGDMLGKSDTNEREMERCQGFPIIGFLLEKAVPEHFT 405
L +++ L +N A LD P ++ DA V I PCV RD+KDII+CLGGIKVL PL QL+Q LA ++D T+ ++ +Q L L DML S+ N+ EM RC G ++ +LL+ PE+ T
Sbjct: 1521 LTNRLFLNYNCRAIEGDLCLDNTPNIGGDRNYDATLVA-INPCVSRDIKDIIYCLGGIKVLFPLIPQLNQTLA----DPQLDSTSSSKLTIQVLGLFKDMLRGSEANQEEMLRCNGLAVLSYLLQTIPPENLT 1648
BLAST of mRNA_M-pyrifera_M_contig115141.3153.1 vs. uniprot
Match: F0ZLG9_DICPU (Uncharacterized protein (Fragment) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZLG9_DICPU) HSP 1 Score: 100 bits (249), Expect = 6.630e-22 Identity = 56/139 (40.29%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 1 GELESKIVLYFNSTARVAKFYLDLAPEKNREKRLDAKQVGNIFPCVKRDVKDIIHCLGGIKVLLPLFAQLDQPLAPNNPGEEIDYTTDTQYIL----QALALLGDMLGKSDTNEREMERCQGFPIIGFLLEKAVPEHFT 405
L S + L +N A LD P+ ++ DA V +I PCV RD+KDII+CLGGIKVL PL Q++Q P + ++ + T Q LAL ML +S+ N+ EM RCQGF ++G+LL++ PE+ T
Sbjct: 380 SSLTSHLFLNYNCRALDGDLCLDNTPDIGGDRNYDATLV-SINPCVSRDLKDIIYCLGGIKVLFPLIQQINQKQQPTSSEDQSTDSNSTMINFKLTNQVLALFKHMLKESEANQEEMLRCQGFSVMGYLLQQISPEYLT 517
BLAST of mRNA_M-pyrifera_M_contig115141.3153.1 vs. uniprot
Match: A0A151Z3T4_9MYCE (BEACH domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z3T4_9MYCE) HSP 1 Score: 99.8 bits (247), Expect = 1.250e-21 Identity = 56/139 (40.29%), Postives = 78/139 (56.12%), Query Frame = 1
Query: 1 GELESKIVLYFNSTARVAKFYLDLAPEKNREKRLDAKQVGNIFPCVKRDVKDIIHCLGGIKVLLPLFAQLDQPLAPNNPGEEIDYTTDTQYILQALALLGDMLGKSDTNEREMERCQGFPIIGFLLEKAVPEHFTSETL 417
L + + L +N A LD P ++ DA V +I PCV RD+KDII+CLGGI+VL PL Q+ + P N E ++ +Q LAL DML SD N+ EM RC GF ++G+LL++ PE+ T+ L
Sbjct: 1480 SSLTNHLFLNYNCRAIEGDLCLDNTPNMGGDRNYDATLV-SINPCVSRDIKDIIYCLGGIRVLFPLIHQIST-MPPQNSSE----INSSKLTIQVLALFKDMLFGSDANQEEMLRCSGFKVMGYLLQQIQPENLTNGAL 1612
BLAST of mRNA_M-pyrifera_M_contig115141.3153.1 vs. uniprot
Match: LVSC_DICDI (BEACH domain-containing protein lvsC n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=LVSC_DICDI) HSP 1 Score: 98.2 bits (243), Expect = 4.270e-21 Identity = 57/158 (36.08%), Postives = 82/158 (51.90%), Query Frame = 1
Query: 1 GELESKIVLYFNSTARVAKFYLDLAPEKNREKRLDAKQVGNIFPCVKRDVKDIIHCLGGIKVLLPLFAQLDQPLAP-----------------------NNPGEEIDYTTDTQYILQALALLGDMLGKSDTNEREMERCQGFPIIGFLLEKAVPEHFT 405
L S + L +N A LD P+ +K DA V +I PCV RD+KDII+CLGGIKVL PL Q++ P++P E++ + + + Q LAL ML +S+ N+ EM RCQGF ++G+LL++ PE+ T
Sbjct: 436 SSLTSHLFLNYNCRALDGDLCLDNTPDIGGDKNYDATLV-SINPCVSRDIKDIIYCLGGIKVLFPLIQQINNPISPLSLELITNENXXXXXXXXXXXSQQQTLEQLQQSINIKLTNQVLALFKFMLKESEANQEEMLRCQGFSVMGYLLQQISPEYLT 592
BLAST of mRNA_M-pyrifera_M_contig115141.3153.1 vs. uniprot
Match: F4PIN9_CAVFA (BEACH domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PIN9_CAVFA) HSP 1 Score: 96.3 bits (238), Expect = 2.030e-20 Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 1
Query: 1 GELESKIVLYFNSTARVAKFYLDLAPEKNREKRLDAKQVGNIFPCVKRDVKDIIHCLGGIKVLLPLFAQLDQPLAPNNPGEEIDYTTDTQYILQALALLGDMLGKSDTNEREMERCQGFPIIGFLLEKAVPEHFTSETL 417
L S++ L +N A LD + + DA V +I PCV RD+KDII+CLGGIKVLLPL Q++ LA +P E+ T++++ +Q L L DML S+ N+ EM R G ++ +LL++ PE+ T + L
Sbjct: 1620 SSLTSRLFLNYNCRAIEGDICLDNSLASGGDHNKDATLV-SINPCVSRDIKDIIYCLGGIKVLLPLIPQINMTLA--DPSREL--TSNSELTIQVLGLFKDMLRGSEANQEEMLRVHGLSVLSYLLQQVPPENLTLDAL 1753
BLAST of mRNA_M-pyrifera_M_contig115141.3153.1 vs. uniprot
Match: UPI000644CBFB (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644CBFB) HSP 1 Score: 90.1 bits (222), Expect = 2.890e-18 Identity = 51/140 (36.43%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 7 LESKIVLYFNSTARVAKFYLDLAPEKNREKRLDAKQVGNIFPCVKRDVKDIIHCLGGIKVLLPLFAQLDQPLAPNNP---GEEIDYTTDTQYILQALALLGDMLGKSDTNEREMERCQGFPIIGFLLEKAVPEHFTSETL 417
L +++ L +N A LD P ++ DA V +I PC+ RD+KDII+CLGGIKVL PL Q +Q + ID + + + +Q LAL DML S+ N+ EM RC+G ++ +LL++ ++ T L
Sbjct: 1480 LTNRLFLSYNCRAIDGDICLDNTPNIGVDRNCDAALV-SINPCISRDIKDIIYCLGGIKVLFPLIPQANQSSLGGSSLSSSSVIDPSNNARLTMQILALFKDMLRGSEANQEEMLRCKGLSVLSYLLQQIPSDNLTQYVL 1618
BLAST of mRNA_M-pyrifera_M_contig115141.3153.1 vs. uniprot
Match: A0A1Y1I8F1_KLENI (WD40 and Beach domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I8F1_KLENI) HSP 1 Score: 87.8 bits (216), Expect = 1.860e-17 Identity = 52/165 (31.52%), Postives = 80/165 (48.48%), Query Frame = 1
Query: 7 LESKIVLYFNSTARVAKFYLDLAP--EKNREKRLDAKQVGNIFPCVKRDVKDIIHCLGGIKVLLPLFAQLDQPLA--------PNNP--------------------GEEIDYTTDTQYILQALALLGDMLGKSDTNEREMERCQGFPIIGFLLEKAVPEHFTSE 411
L ++VL +N+ A + + + AP E++ E DA +G CV R ++D+IHC+GGI LLPLF QLDQP+A P +P + +D+ D ++ + L ML N+ +M QGF ++G LE+ P+H T E
Sbjct: 1449 LAPRVVLAYNAQASLGRTVYNNAPFAEQSAELAYDAAILGGTQLCVTRKMQDVIHCVGGIPSLLPLFTQLDQPVASSPDLDSEPTSPVSPSNSTTSPEALSSLQNETSKSLDFAVDHSMAVEVIGALSAMLTSHPANQEDMHANQGFAVVGHQLERVSPQHLTVE 1613
BLAST of mRNA_M-pyrifera_M_contig115141.3153.1 vs. uniprot
Match: A0A6A5BID4_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BID4_NAEFO) HSP 1 Score: 77.4 bits (189), Expect = 7.990e-14 Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 1
Query: 100 LDAKQVGNIFPCVKRDVKDIIHCLGGIKVLLPLFAQLDQPLAPNNPGEEIDYTTDTQYILQALALLGDMLGKSDTNEREMERCQGFPIIGFLLEKAVPEHFTSETL 417
L+A+ + CV + KDII CLGGIKVL PLF QLD+ L+ + ++ ++ + +LL D+L + N +M RC+GF +I FLL++ P+H T T+
Sbjct: 1570 LNARILNGTQLCVTHNAKDIIGCLGGIKVLFPLFLQLDR-LSHTDQVVSVNDRSEPYMVNTLFSLLIDLLSEHVDNLEDMARCRGFLVISFLLKQISPQHLTRSTV 1674 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115141.3153.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115141.3153.1 >prot_M-pyrifera_M_contig115141.3153.1 ID=prot_M-pyrifera_M_contig115141.3153.1|Name=mRNA_M-pyrifera_M_contig115141.3153.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp GELESKIVLYFNSTARVAKFYLDLAPEKNREKRLDAKQVGNIFPCVKRDVback to top mRNA from alignment at M-pyrifera_M_contig115141:24..440- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115141.3153.1 ID=mRNA_M-pyrifera_M_contig115141.3153.1|Name=mRNA_M-pyrifera_M_contig115141.3153.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=417bp|location=Sequence derived from alignment at M-pyrifera_M_contig115141:24..440- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115141:24..440- >mRNA_M-pyrifera_M_contig115141.3153.1 ID=mRNA_M-pyrifera_M_contig115141.3153.1|Name=mRNA_M-pyrifera_M_contig115141.3153.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig115141:24..440- (Macrocystis pyrifera P11B4 male)back to top |