mRNA_M-pyrifera_M_contig11512.3146.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11512.3146.1 vs. uniprot
Match: D7FTN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN5_ECTSI) HSP 1 Score: 250 bits (639), Expect = 5.550e-77 Identity = 114/133 (85.71%), Postives = 125/133 (93.98%), Query Frame = 1
Query: 1 RGWFYHKAVWLILPGGKKVVLTARVHKPLFGQAEGELVLLEMPQVDRPLAEHNLPWREKVLASGPDVMFEVVDLDPTDCTVQVVCAEFFGGKVTMHSVWGGGSLPGSRPSVTESWVLDYNAGPAYSISAADLR 399
RGWFYHKAVW++LPGGKKVVLTARVHKP+FGQAEGELVLLEMP+VD PL+E NLPWREKVL +GPDVMFEVVDLD D TVQV+CAEFFGG+VTMHS+WGGG LPGS+PSVTESWVLD NAGPAYSI+AADLR
Sbjct: 408 RGWFYHKAVWVVLPGGKKVVLTARVHKPIFGQAEGELVLLEMPRVDSPLSEQNLPWREKVLVTGPDVMFEVVDLDREDSTVQVICAEFFGGRVTMHSLWGGGQLPGSQPSVTESWVLDDNAGPAYSITAADLR 540
BLAST of mRNA_M-pyrifera_M_contig11512.3146.1 vs. uniprot
Match: A0A6H5KJ55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ55_9PHAE) HSP 1 Score: 251 bits (640), Expect = 7.300e-75 Identity = 114/133 (85.71%), Postives = 125/133 (93.98%), Query Frame = 1
Query: 1 RGWFYHKAVWLILPGGKKVVLTARVHKPLFGQAEGELVLLEMPQVDRPLAEHNLPWREKVLASGPDVMFEVVDLDPTDCTVQVVCAEFFGGKVTMHSVWGGGSLPGSRPSVTESWVLDYNAGPAYSISAADLR 399
RGWFYHKAVW++LPGGKKVVLTARVHKP+FGQAEGELVLLEMP+VD PL+E NLPWREKVL +GPDVMFEVVDLD D TVQV+CAEFFGG+VTMHS+WGGG LPGS+PSVTESWVLD NAGPAYSI+AADLR
Sbjct: 750 RGWFYHKAVWVVLPGGKKVVLTARVHKPIFGQAEGELVLLEMPRVDHPLSEQNLPWREKVLVTGPDVMFEVVDLDREDSTVQVICAEFFGGRVTMHSLWGGGQLPGSQPSVTESWVLDDNAGPAYSITAADLR 882
BLAST of mRNA_M-pyrifera_M_contig11512.3146.1 vs. uniprot
Match: A0A836CJ47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ47_9STRA) HSP 1 Score: 171 bits (433), Expect = 8.650e-49 Identity = 80/132 (60.61%), Postives = 98/132 (74.24%), Query Frame = 1
Query: 1 RGWFYHKAVWLILPGGKKVVLTARVHKPLFGQAEGELVLLEMPQVDRPLAEHNLPWREKVLASGPDVMFEVVDLDPTDCTVQVVCAEFFGGKVTMHSVWGGGSLPGSRPSVTESWVLDYNAGPAYSISAADL 396
+GWFYHKAVW+ +P G++ VL AR KPLFG GELVL +MP V +PLA + LPWRE VLA+GPDVMF +VDLD D TV+V AEFF ++TMHSV G + G++ V +SWVLD N GPAYS+ AADL
Sbjct: 62 KGWFYHKAVWVNMPDGRRGVLAARATKPLFGGGRGELVLFDMPSVAQPLAAYALPWRETVLANGPDVMFHLVDLDDADGTVEVFAAEFFARRLTMHSVRWGDARRGTQSQVVQSWVLDSNCGPAYSVVAADL 193
BLAST of mRNA_M-pyrifera_M_contig11512.3146.1 vs. uniprot
Match: A0A4D9DCX2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCX2_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.410e-38 Identity = 74/134 (55.22%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 4 GWFYHKAVWLIL--PGGKKVVLTARVHKPLFGQAEGELVLLEMPQVDRPLAEHNLPWREKVLASGPDVMFEVVDLDPTDCTVQVVCAEFFGGKVTMHSVWGGGSLPGSRPSVTESWVLDYNAGPAYSISAADLR 399
GWFYHKA W+ L PGG+ +LTAR KP F Q EGELVLL P+ PLAE N PW+E VLA GPDVMF+V DLDPTD ++V +EFF ++++H + G G P V S VLD GPAYS+ ADLR
Sbjct: 546 GWFYHKATWVDLLGPGGRPCLLTARATKPFFAQTEGELVLLLQPEGPFPLAEWNTPWQEVVLAKGPDVMFDVADLDPTDDVLEVFASEFFSRRLSLHRIIKGDWRTGRLPRVLTSEVLDDALGPAYSVVLADLR 679
BLAST of mRNA_M-pyrifera_M_contig11512.3146.1 vs. uniprot
Match: A0A7S4DAE7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAE7_HETAK) HSP 1 Score: 135 bits (340), Expect = 1.950e-34 Identity = 67/138 (48.55%), Postives = 92/138 (66.67%), Query Frame = 1
Query: 4 GWFYHKAVWL-ILPGGKKVVLTARVHKPLFGQAEGELVLLEMPQVDRPLAEHNLPWREKVLASGPDVMFEVVDLDPTDCTVQVVCAEFFGGKVTMHSV-----WGGGSLPGSRPSVTESWVLDYNAGPAYSISAADLR 399
G+FYHKAVW+ + G+K +LTAR KPL GQAEGELV E P V PLA PW+E V+ +GPDVMFEV+D+DP D ++++V AEFF ++T+ S+ W L ++ V + V+D GPAY ++AA+LR
Sbjct: 212 GFFYHKAVWVDLFQTGQKGILTARAKKPLLGQAEGELVFFEQPLVRDPLASFCTPWKETVITTGPDVMFEVIDIDPDDDSIEIVAAEFFNERLTLTSLAPRRDW----LGPNKIQVKQKMVIDAGCGPAYGVTAANLR 345
BLAST of mRNA_M-pyrifera_M_contig11512.3146.1 vs. uniprot
Match: L1JIM1_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JIM1_GUITC) HSP 1 Score: 128 bits (322), Expect = 7.580e-32 Identity = 71/136 (52.21%), Postives = 87/136 (63.97%), Query Frame = 1
Query: 1 RGWFYHKAVWLILPGGKKVVLTARVHKPL--FGQAEGELVLLEMPQVDRPLAEHNLPWREKVLASGPDVMFEVVDLDPTDCTVQVVCAEFFGGKVTMHSV-WGGGSLPGSRPSVTESWVLDYNAGPAYSISAADLR 399
+ WFYH+AV L G + VLTAR KP+ F +AEGELV LE P P AE NLPWRE +LA GPDVMFEVVDLDP D TV+VV AEFF +++ S+ W P V ++ ++D G AYS+ AADL
Sbjct: 277 KSWFYHRAVPLHF-GSARGVLTARARKPILPFQEAEGELVWLEQPDTVNPFAEWNLPWREVILAEGPDVMFEVVDLDPEDDTVEVVAAEFFRQRLSFFSLRW---DETCKSPKVVQTELIDDKLGQAYSVVAADLE 408
BLAST of mRNA_M-pyrifera_M_contig11512.3146.1 vs. uniprot
Match: A0A7S4CRI4_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CRI4_9EUGL) HSP 1 Score: 112 bits (279), Expect = 1.080e-26 Identity = 58/120 (48.33%), Postives = 77/120 (64.17%), Query Frame = 1
Query: 46 GKKVVLTARVHKPL--FGQAEGELVLLEMPQVDRPLAEHNLPWREKVLASGPDVMFEVVDLDPTDCTVQVVCAEFFGGKVTMHSV-WGGGSLPGSRPSVTESWVLDYNAGPAYSISAADL 396
G++ +LTAR +KPL F +A GELV LE P P E + PW+E VL +GPDVMF+VVDLDP D TV+V +EFF ++T+H + W S P V ++ V+D GPAY + ADL
Sbjct: 1 GREGILTARANKPLVPFTKALGELVWLERPNTLAPFREWSAPWKEHVLVTGPDVMFDVVDLDPNDETVEVFASEFFAERLTLHRIAW---SRASDAPFVVDTQVIDNGLGPAYGVVVADL 117
BLAST of mRNA_M-pyrifera_M_contig11512.3146.1 vs. uniprot
Match: A0A7S1DNQ2_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DNQ2_HEMAN) HSP 1 Score: 106 bits (264), Expect = 3.030e-24 Identity = 64/132 (48.48%), Postives = 76/132 (57.58%), Query Frame = 1
Query: 10 FYHKAVWLILPGGKKVVLTARVHKPL--FGQAEGELVLLEMPQVDRPLAEHNLPWREKVLASGPDVMFEVVDLDPTDCTVQVVCAEFFGGKVTMHSV-WGGGSLPGSRPSVTESWVLDYNAGPAYSISAADL 396
FYHKAV + G + V LTAR PL + + GELV LE P +P A + PWRE VLA GPDVMF+V DLD D TVQV AEFF ++TM S+ W RP V + VLD G AYS+ L
Sbjct: 209 FYHKAVPCSIDGHEGV-LTARARLPLVPWMKGVGELVWLEKPDTLQPTAPWSTPWREIVLAEGPDVMFDVADLDEGDTTVQVFAAEFFARRLTMFSILW---DADAGRPRVVQREVLDSQLGQAYSVQVLSL 336
BLAST of mRNA_M-pyrifera_M_contig11512.3146.1 vs. uniprot
Match: A0A7S0PKA3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PKA3_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.330e-23 Identity = 58/154 (37.66%), Postives = 81/154 (52.60%), Query Frame = 1
Query: 4 GWFYHKAVWLILPG-GKKVVLTARVHKPLFGQA----EGELVLLEMPQVDR-----------------PLAEHNLPWREKVLASGPDVMFEVVDLDPTDCTVQVVCAEFFGGKVTMHSVWGGGSLPGSRPSVTESWVLDYNAGPAYSISAADLR 399
GW+YH+AVW+ L G++ VL AR P+ G+ GELV +E P+ R P +LPW+ +L GPDVMF V DLD D +V+++ ++FFG KVT+HSV G P V V+D G ++S +DLR
Sbjct: 23 GWYYHRAVWIDLTNDGRQSVLAARARSPIPGRPLEENVGELVFIERPRPYRYDEETGTPLDVDGTVFDPFGPRHLPWKTTILDEGPDVMFCVADLDEKDNSVEIIASQFFGKKVTLHSV-----ERGLNPRVNFRRVIDDRCGSSFSAILSDLR 171
BLAST of mRNA_M-pyrifera_M_contig11512.3146.1 vs. uniprot
Match: A0A1Z5JA26_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JA26_FISSO) HSP 1 Score: 98.6 bits (244), Expect = 2.370e-21 Identity = 62/158 (39.24%), Postives = 82/158 (51.90%), Query Frame = 1
Query: 7 WFYHKAVWLILPG-GKKVVLTARVHKPLFGQAE----------GELVLLEMPQ-----------------VDRPLAEHNLPWREKVLASGPDVMFEVVDLDPTDCTVQVVCAEFFGGKVTMHSVWGGGSLPGSRPSVTESWVLDYNAGPAYSISAADL 396
WFYH+AVW+ L G G++ +LTAR A+ GEL+ LE P V PL +LPW+ VLASGPDVMF V D+DP D T++V+ ++FF GKV++HS+ G P V S +D N G A+ ADL
Sbjct: 349 WFYHRAVWVDLTGDGRQSLLTARCQVSTSLNADLNIMSGIQKTGELIWLECPAPAKRDPTTGTPLDHDGTVFDPLDPKHLPWKAHVLASGPDVMFCVADMDPMDDTIEVLSSQFFPGKVSLHSI-----RRGPSPKVVFSRDIDGNCGAAFGSILADL 501 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11512.3146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11512.3146.1 >prot_M-pyrifera_M_contig11512.3146.1 ID=prot_M-pyrifera_M_contig11512.3146.1|Name=mRNA_M-pyrifera_M_contig11512.3146.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=134bp RGWFYHKAVWLILPGGKKVVLTARVHKPLFGQAEGELVLLEMPQVDRPLAback to top mRNA from alignment at M-pyrifera_M_contig11512:840..3746- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11512.3146.1 ID=mRNA_M-pyrifera_M_contig11512.3146.1|Name=mRNA_M-pyrifera_M_contig11512.3146.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2907bp|location=Sequence derived from alignment at M-pyrifera_M_contig11512:840..3746- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11512:840..3746- >mRNA_M-pyrifera_M_contig11512.3146.1 ID=mRNA_M-pyrifera_M_contig11512.3146.1|Name=mRNA_M-pyrifera_M_contig11512.3146.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig11512:840..3746- (Macrocystis pyrifera P11B4 male)back to top |