prot_M-pyrifera_M_contig101490.312.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101490.312.1
Unique Nameprot_M-pyrifera_M_contig101490.312.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length115
Homology
BLAST of mRNA_M-pyrifera_M_contig101490.312.1 vs. uniprot
Match: A0A183KDQ9_9TREM (Uncharacterized protein n=1 Tax=Schistosoma curassoni TaxID=6186 RepID=A0A183KDQ9_9TREM)

HSP 1 Score: 70.5 bits (171), Expect = 8.330e-12
Identity = 45/114 (39.47%), Postives = 72/114 (63.16%), Query Frame = 0
Query:    1 ADVRRAAISALVVTRETLPDLLERTQDVSDTVRRAALESVAESVAPGVLSASQRDFLVSSGITDSSKSVRQATVMLLAKWLVGHRDSELGLLLR---EFSESVAEQAIASLFQL 111
            A+VRRAA++A+V+T  TLP L+ER +D++D VRRAA + +A       LS ++R  ++  G++D S+ VR+AT  L+  W  G     + LL R   E   S +++A+ SLF++
Sbjct:  211 AEVRRAALAAMVLTTRTLPSLVERCRDLADNVRRAAYKLLASRGILRPLSIAKRIRILQDGLSDRSEEVRKATKELVLAWFNGTNRDPVLLLRRLDPEGDPSTSQKALDSLFEM 324          
BLAST of mRNA_M-pyrifera_M_contig101490.312.1 vs. uniprot
Match: A0A8E0VJ18_9TREM (Condensin complex subunit 3 n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0VJ18_9TREM)

HSP 1 Score: 70.5 bits (171), Expect = 8.800e-12
Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = 0
Query:    1 ADVRRAAISALVVTRETLPDLLERTQDVSDTVRRAALESVAESVAPGVLSASQRDFLVSSGITDSSKSVRQATVMLLAKWLVGHRDSELGLLLREFSESVAE 102
            ADVRRAA++A+V+T  TLP L+ER +DVSD+VRR A + +A       LS ++R  ++  G+TD S  VRQA   L+  W     +  + LL R  +E V E
Sbjct:   75 ADVRRAALAAMVLTTRTLPSLIERCRDVSDSVRRTAYKILATRGVLRPLSIAKRIRVLQDGLTDRSAEVRQAAQELVISWFKATENDPVKLLRRLDTEGVPE 176          
BLAST of mRNA_M-pyrifera_M_contig101490.312.1 vs. uniprot
Match: A0A430QGC8_SCHBO (Condensin complex subunit 3 n=1 Tax=Schistosoma bovis TaxID=6184 RepID=A0A430QGC8_SCHBO)

HSP 1 Score: 70.5 bits (171), Expect = 8.810e-12
Identity = 45/114 (39.47%), Postives = 72/114 (63.16%), Query Frame = 0
Query:    1 ADVRRAAISALVVTRETLPDLLERTQDVSDTVRRAALESVAESVAPGVLSASQRDFLVSSGITDSSKSVRQATVMLLAKWLVGHRDSELGLLLR---EFSESVAEQAIASLFQL 111
            A+VRRAA++A+V+T  TLP L+ER +D++D VRRAA + +A       LS ++R  ++  G++D S+ VR+AT  L+  W  G     + LL R   E   S +++A+ SLF++
Sbjct:  211 AEVRRAALAAMVLTTRTLPSLVERCRDLADNVRRAAYKLLASRGILRPLSIAKRIRILQDGLSDRSEEVRKATKELVLAWFNGTNRDPVLLLRRLDPEGDPSTSQKALDSLFEM 324          
BLAST of mRNA_M-pyrifera_M_contig101490.312.1 vs. uniprot
Match: A0A3Q0KI66_SCHMA (Cnd3 domain-containing protein n=4 Tax=Schistosoma TaxID=6181 RepID=A0A3Q0KI66_SCHMA)

HSP 1 Score: 70.5 bits (171), Expect = 8.870e-12
Identity = 45/114 (39.47%), Postives = 72/114 (63.16%), Query Frame = 0
Query:    1 ADVRRAAISALVVTRETLPDLLERTQDVSDTVRRAALESVAESVAPGVLSASQRDFLVSSGITDSSKSVRQATVMLLAKWLVGHRDSELGLLLR---EFSESVAEQAIASLFQL 111
            A+VRRAA++A+V+T  TLP L+ER +D++D VRRAA + +A       LS ++R  ++  G++D S+ VR+AT  L+  W  G     + LL R   E   S +++A+ SLF++
Sbjct:  193 AEVRRAALAAMVLTTRTLPSLVERCRDLADNVRRAAYKLLASRGILRPLSIAKRIRILQDGLSDRSEEVRKATKELVLAWFNGTNRDPVLLLRRLDPEGDPSTSQKALDSLFEM 306          
BLAST of mRNA_M-pyrifera_M_contig101490.312.1 vs. uniprot
Match: A0A4Z2D0Q7_SCHJA (Condensin complex subunit 3 n=2 Tax=Schistosoma japonicum TaxID=6182 RepID=A0A4Z2D0Q7_SCHJA)

HSP 1 Score: 69.3 bits (168), Expect = 2.250e-11
Identity = 45/114 (39.47%), Postives = 72/114 (63.16%), Query Frame = 0
Query:    1 ADVRRAAISALVVTRETLPDLLERTQDVSDTVRRAALESVAESVAPGVLSASQRDFLVSSGITDSSKSVRQATVMLLAKWLVGHRDSELGLLLREFSES---VAEQAIASLFQL 111
            A+VRRAA++A+V+T  TLP L+ER +D++D VRRAA + +A       LS ++R  ++  G++D S+ VR+AT  L+  W  G     + LL R   ES    +++A+ SLF++
Sbjct:  193 AEVRRAALAAMVLTTRTLPSLVERCRDLADNVRRAAYKLLASRGILRPLSIAKRIRILQDGLSDRSEEVRKATKELVLAWFNGSNRDPVLLLRRLDPESDPGTSQKALDSLFEV 306          
BLAST of mRNA_M-pyrifera_M_contig101490.312.1 vs. uniprot
Match: A0A504YZ57_FASGI (Condensin complex subunit 3 n=2 Tax=Fasciola TaxID=6191 RepID=A0A504YZ57_FASGI)

HSP 1 Score: 67.4 bits (163), Expect = 1.070e-10
Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0
Query:    1 ADVRRAAISALVVTRETLPDLLERTQDVSDTVRRAALESVAESVAPGVLSASQRDFLVSSGITDSSKSVRQATVMLLAKWLVGHRDSELGLLLREFSESVAE 102
            A+VRRAA++A+V+T  TLP L+ER +DVSD+VRR A + +A       LS ++R  ++  G+TD S  VRQA   L+  W        + LL R  +E V E
Sbjct:  196 AEVRRAALAAMVLTTRTLPSLVERCRDVSDSVRRTAYKILATRGVLRPLSIAKRIRVLHDGLTDRSAEVRQAAQELVLSWFKATEGDPVQLLRRLDTEGVPE 297          
BLAST of mRNA_M-pyrifera_M_contig101490.312.1 vs. uniprot
Match: A0A8J4WGY5_9TREM (UVR domain-containing protein n=1 Tax=Paragonimus heterotremus TaxID=100268 RepID=A0A8J4WGY5_9TREM)

HSP 1 Score: 66.2 bits (160), Expect = 2.700e-10
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 0
Query:    2 DVRRAAISALVVTRETLPDLLERTQDVSDTVRRAALESVAESVAPGVLSASQRDFLVSSGITDSSKSVRQATVMLLAKWLVGHRDSELGLLLREFSESVAE 102
            +VRRAA++A+V+T +TLP L+ER +D+SDTVRR A + +        LS ++R  ++  G+TD S  VRQA   L+  W        + LL R  +E V E
Sbjct:   26 EVRRAALAAMVLTTKTLPSLIERCRDLSDTVRRTAYKILTARSVLRPLSIAKRIRILQDGLTDRSAEVRQAAQELVLAWFNATNRDPIHLLRRLDTEGVPE 126          
BLAST of mRNA_M-pyrifera_M_contig101490.312.1 vs. uniprot
Match: A0A5J4NV50_9TREM (Condensin complex subunit 3 n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NV50_9TREM)

HSP 1 Score: 66.2 bits (160), Expect = 2.710e-10
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 0
Query:    2 DVRRAAISALVVTRETLPDLLERTQDVSDTVRRAALESVAESVAPGVLSASQRDFLVSSGITDSSKSVRQATVMLLAKWLVGHRDSELGLLLREFSESVAE 102
            +VRRAA++A+V+T +TLP L+ER +D+SDTVRR A + +        LS ++R  ++  G+TD S  VRQA   L+  W        + LL R  +E V E
Sbjct:  194 EVRRAALAAMVLTTKTLPSLIERCRDLSDTVRRTAYKILTARSVLRPLSIAKRIRILQDGLTDRSAEVRQAAQELVLAWFNATNRDPIHLLRRLDTEGVPE 294          
BLAST of mRNA_M-pyrifera_M_contig101490.312.1 vs. uniprot
Match: A0A7S1EUK3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EUK3_9RHOD)

HSP 1 Score: 63.5 bits (153), Expect = 4.550e-10
Identity = 35/86 (40.70%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    1 ADVRRAAISALVVTRETLPDLLERTQDVSDTVRRAALESVAESVAPGVLSASQRDFLVSSGITDSSKSVRQATVMLLAK--WLVGH 84
            A VR+A ++++ +T+ETL  LL+RT+DV+  VR AA+  +A  V P +L+  QRD L+  G+ D +++VR+AT   L +  W  G+
Sbjct:   88 ASVRKACVTSIAITKETLQCLLQRTRDVNLEVRLAAIRGIALKVEPTMLTKEQRDSLLEQGLRDRTENVRKATAEYLLRDGWFHGY 173          
BLAST of mRNA_M-pyrifera_M_contig101490.312.1 vs. uniprot
Match: UPI000F67EB79 (LOW QUALITY PROTEIN: condensin complex subunit 3-like n=1 Tax=Penaeus vannamei TaxID=6689 RepID=UPI000F67EB79)

HSP 1 Score: 65.5 bits (158), Expect = 4.810e-10
Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = 0
Query:    2 DVRRAAISALVVTRETLPDLLERTQDVSDTVRRAALESVAESVAPGVLSASQRDFLVSSGITDSSKSVRQATVM-LLAKWLVGHRDSELGLLLR---EFSESVAEQAIASLFQ 110
            DVRRA ++++ +T +TLPD+LERT+DV D VRR A E ++  V    L+ +QR  L++ G+TD S  VR A    L+  WL     + L LL     E +   AE A+ S+F+
Sbjct:  211 DVRRAVLTSIAITFQTLPDILERTRDVRDLVRRQAFEVISRKVHLKSLTIAQRVRLIAEGLTDRSDVVRGAVEKNLIQSWLRMVNGNVLDLLSCLDVETAVKEAELALQSMFR 323          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101490.312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A183KDQ9_9TREM8.330e-1239.47Uncharacterized protein n=1 Tax=Schistosoma curass... [more]
A0A8E0VJ18_9TREM8.800e-1243.14Condensin complex subunit 3 n=1 Tax=Fasciolopsis b... [more]
A0A430QGC8_SCHBO8.810e-1239.47Condensin complex subunit 3 n=1 Tax=Schistosoma bo... [more]
A0A3Q0KI66_SCHMA8.870e-1239.47Cnd3 domain-containing protein n=4 Tax=Schistosoma... [more]
A0A4Z2D0Q7_SCHJA2.250e-1139.47Condensin complex subunit 3 n=2 Tax=Schistosoma ja... [more]
A0A504YZ57_FASGI1.070e-1042.16Condensin complex subunit 3 n=2 Tax=Fasciola TaxID... [more]
A0A8J4WGY5_9TREM2.700e-1040.59UVR domain-containing protein n=1 Tax=Paragonimus ... [more]
A0A5J4NV50_9TREM2.710e-1040.59Condensin complex subunit 3 n=1 Tax=Paragonimus we... [more]
A0A7S1EUK3_9RHOD4.550e-1040.70Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
UPI000F67EB794.810e-1040.71LOW QUALITY PROTEIN: condensin complex subunit 3-l... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..115
e-value: 2.9E-5
score: 25.4
IPR027165Condensin complex subunit 3PANTHERPTHR14418CONDENSIN COMPLEX SUBUNIT 3-RELATEDcoord: 1..111
NoneNo IPR availablePANTHERPTHR14418:SF5CONDENSIN COMPLEX SUBUNIT 3coord: 1..111
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101490contigM-pyrifera_M_contig101490:326..670 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101490.312.1mRNA_M-pyrifera_M_contig101490.312.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101490 326..670 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101490.312.1 ID=prot_M-pyrifera_M_contig101490.312.1|Name=mRNA_M-pyrifera_M_contig101490.312.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp
ADVRRAAISALVVTRETLPDLLERTQDVSDTVRRAALESVAESVAPGVLS
ASQRDFLVSSGITDSSKSVRQATVMLLAKWLVGHRDSELGLLLREFSESV
AEQAIASLFQLAARP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR027165CND3
IPR016024ARM-type_fold