prot_M-pyrifera_M_contig114776.3066.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114776.3066.1
Unique Nameprot_M-pyrifera_M_contig114776.3066.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length93
Homology
BLAST of mRNA_M-pyrifera_M_contig114776.3066.1 vs. uniprot
Match: A0A3D5DGX9_9GAMM (DNA helicase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DGX9_9GAMM)

HSP 1 Score: 164 bits (414), Expect = 2.590e-45
Identity = 76/93 (81.72%), Postives = 81/93 (87.10%), Query Frame = 0
Query:    1 DAYQAYEDACARAGLVDFAELLLRAHELWRDTPGLLRHYRERFWHVLVDEFQDTNTLQYAWLRQLVGDDGNLFVVGDDDQSIYSWRGAKVENM 93
            D YQAYE+AC RAGLVDFAELLLRA+ELW   P LLRHY+ERF HVLVDEFQDT+ LQY WLRQLVG  GNLFVVGDDDQSIYSWRGA +ENM
Sbjct:  172 DVYQAYEEACERAGLVDFAELLLRAYELWSTRPELLRHYQERFRHVLVDEFQDTSVLQYGWLRQLVGAQGNLFVVGDDDQSIYSWRGASIENM 264          
BLAST of mRNA_M-pyrifera_M_contig114776.3066.1 vs. uniprot
Match: A0A376L5E2_ECOLX (DNA helicase n=2 Tax=Escherichia coli TaxID=562 RepID=A0A376L5E2_ECOLX)

HSP 1 Score: 151 bits (382), Expect = 4.120e-45
Identity = 66/91 (72.53%), Postives = 79/91 (86.81%), Query Frame = 0
Query:    3 YQAYEDACARAGLVDFAELLLRAHELWRDTPGLLRHYRERFWHVLVDEFQDTNTLQYAWLRQLVGDDGNLFVVGDDDQSIYSWRGAKVENM 93
            YQAY++AC RAGLVDFAELLLRAHELW + P +L+HYRERF ++LVDEFQDTN +QYAW+R L GD G + +VGDDDQSIY WRGA+VEN+
Sbjct:   32 YQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENI 122          
BLAST of mRNA_M-pyrifera_M_contig114776.3066.1 vs. uniprot
Match: A0A2N6GMT4_9GAMM (DNA helicase n=1 Tax=Sedimenticola sp. TaxID=1940285 RepID=A0A2N6GMT4_9GAMM)

HSP 1 Score: 161 bits (408), Expect = 1.850e-44
Identity = 72/91 (79.12%), Postives = 80/91 (87.91%), Query Frame = 0
Query:    3 YQAYEDACARAGLVDFAELLLRAHELWRDTPGLLRHYRERFWHVLVDEFQDTNTLQYAWLRQLVGDDGNLFVVGDDDQSIYSWRGAKVENM 93
            YQ Y++AC R G+VDFAELLLRAHELWRD P +L HYRERF HVLVDEFQDTNT+QYAWLR L G++ NLFVVGDDDQSIY WRGAKVEN+
Sbjct:  174 YQEYQNACERGGVVDFAELLLRAHELWRDRPDVLHHYRERFQHVLVDEFQDTNTIQYAWLRLLAGENNNLFVVGDDDQSIYGWRGAKVENI 264          
BLAST of mRNA_M-pyrifera_M_contig114776.3066.1 vs. uniprot
Match: A0A377B5R8_ECOLX (DNA helicase n=1 Tax=Escherichia coli TaxID=562 RepID=A0A377B5R8_ECOLX)

HSP 1 Score: 151 bits (382), Expect = 2.500e-44
Identity = 66/91 (72.53%), Postives = 79/91 (86.81%), Query Frame = 0
Query:    3 YQAYEDACARAGLVDFAELLLRAHELWRDTPGLLRHYRERFWHVLVDEFQDTNTLQYAWLRQLVGDDGNLFVVGDDDQSIYSWRGAKVENM 93
            YQAY++AC RAGLVDFAELLLRAHELW + P +L+HYRERF ++LVDEFQDTN +QYAW+R L GD G + +VGDDDQSIY WRGA+VEN+
Sbjct:    2 YQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENI 92          
BLAST of mRNA_M-pyrifera_M_contig114776.3066.1 vs. uniprot
Match: A0A1G5QRN2_9GAMM (DNA helicase n=1 Tax=Thiohalomonas denitrificans TaxID=415747 RepID=A0A1G5QRN2_9GAMM)

HSP 1 Score: 160 bits (405), Expect = 4.830e-44
Identity = 71/91 (78.02%), Postives = 78/91 (85.71%), Query Frame = 0
Query:    3 YQAYEDACARAGLVDFAELLLRAHELWRDTPGLLRHYRERFWHVLVDEFQDTNTLQYAWLRQLVGDDGNLFVVGDDDQSIYSWRGAKVENM 93
            YQAYE AC R G+VDFAELLLRAHELWRD P LL HYRERF H+LVDEFQDTN +QYAW+R L GD G +FVVGDDDQSIY WRGA+VEN+
Sbjct:  174 YQAYEQACQRGGVVDFAELLLRAHELWRDRPDLLAHYRERFRHILVDEFQDTNAIQYAWIRLLAGDSGQVFVVGDDDQSIYGWRGARVENI 264          
BLAST of mRNA_M-pyrifera_M_contig114776.3066.1 vs. uniprot
Match: T1CF86_9ZZZZ (DNA helicase (Fragment) n=1 Tax=mine drainage metagenome TaxID=410659 RepID=T1CF86_9ZZZZ)

HSP 1 Score: 148 bits (373), Expect = 6.890e-44
Identity = 65/91 (71.43%), Postives = 77/91 (84.62%), Query Frame = 0
Query:    3 YQAYEDACARAGLVDFAELLLRAHELWRDTPGLLRHYRERFWHVLVDEFQDTNTLQYAWLRQLVGDDGNLFVVGDDDQSIYSWRGAKVENM 93
            Y  YE+ACAR+G+VDFAELLLR+ ELWRD P +L+HYR RF HVLVDEFQDTN +QYAWL+ LVG +   FVVGDDDQS+Y WRGA+VEN+
Sbjct:   36 YTLYEEACARSGVVDFAELLLRSFELWRDQPAILQHYRRRFRHVLVDEFQDTNAIQYAWLKLLVGSESCPFVVGDDDQSVYGWRGARVENL 126          
BLAST of mRNA_M-pyrifera_M_contig114776.3066.1 vs. uniprot
Match: A0A379SBL6_SALER (DNA helicase n=1 Tax=Salmonella enterica subsp. arizonae TaxID=59203 RepID=A0A379SBL6_SALER)

HSP 1 Score: 151 bits (381), Expect = 7.920e-44
Identity = 66/91 (72.53%), Postives = 79/91 (86.81%), Query Frame = 0
Query:    3 YQAYEDACARAGLVDFAELLLRAHELWRDTPGLLRHYRERFWHVLVDEFQDTNTLQYAWLRQLVGDDGNLFVVGDDDQSIYSWRGAKVENM 93
            YQAY++AC RAGLVDFAELLLRAHELW + P +L+HYRERF ++LVDEFQDTN +QYAW+R L GD G + +VGDDDQSIY WRGA+VEN+
Sbjct:   31 YQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWVRLLAGDTGKVMIVGDDDQSIYGWRGAQVENI 121          
BLAST of mRNA_M-pyrifera_M_contig114776.3066.1 vs. uniprot
Match: A0A369CGU3_9GAMM (DNA helicase n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369CGU3_9GAMM)

HSP 1 Score: 159 bits (403), Expect = 9.410e-44
Identity = 71/91 (78.02%), Postives = 78/91 (85.71%), Query Frame = 0
Query:    3 YQAYEDACARAGLVDFAELLLRAHELWRDTPGLLRHYRERFWHVLVDEFQDTNTLQYAWLRQLVGDDGNLFVVGDDDQSIYSWRGAKVENM 93
            Y AYE ACAR GLVDFAELLLRAHELW + P LLRHY+ERF H+LVDEFQDTN +QYAWLR L GD G +F VGDDDQSIYSWRGA++ENM
Sbjct:  174 YAAYEAACARGGLVDFAELLLRAHELWLNNPALLRHYQERFRHILVDEFQDTNAIQYAWLRLLAGDSGRMFAVGDDDQSIYSWRGARIENM 264          
BLAST of mRNA_M-pyrifera_M_contig114776.3066.1 vs. uniprot
Match: A0A377UUS3_KLEPN (DNA helicase n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=A0A377UUS3_KLEPN)

HSP 1 Score: 151 bits (382), Expect = 1.120e-43
Identity = 66/91 (72.53%), Postives = 79/91 (86.81%), Query Frame = 0
Query:    3 YQAYEDACARAGLVDFAELLLRAHELWRDTPGLLRHYRERFWHVLVDEFQDTNTLQYAWLRQLVGDDGNLFVVGDDDQSIYSWRGAKVENM 93
            YQAY++AC RAGLVDFAELLLRAHELW + P +L+HYRERF ++LVDEFQDTN +QYAW+R L GD G + +VGDDDQSIY WRGA+VEN+
Sbjct:   45 YQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENI 135          
BLAST of mRNA_M-pyrifera_M_contig114776.3066.1 vs. uniprot
Match: A0A349S3K0_9GAMM (DNA helicase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349S3K0_9GAMM)

HSP 1 Score: 152 bits (385), Expect = 1.400e-43
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = 0
Query:    3 YQAYEDACARAGLVDFAELLLRAHELWRDTPGLLRHYRERFWHVLVDEFQDTNTLQYAWLRQLVGDDGNLFVVGDDDQSIYSWRGAKVENM 93
            YQAYE AC + GL+DFAE+LLR HE+WR+ P LL  Y++RF H+LVDEFQDTNT+QYAWLRQL G +G+LF+VGDDDQ+IY WRGAK+EN+
Sbjct:  175 YQAYEQACQQNGLIDFAEILLRCHEMWRNHPALLTEYQQRFQHILVDEFQDTNTIQYAWLRQLTGKEGHLFIVGDDDQAIYGWRGAKIENI 265          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114776.3066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DGX9_9GAMM2.590e-4581.72DNA helicase n=1 Tax=Gammaproteobacteria bacterium... [more]
A0A376L5E2_ECOLX4.120e-4572.53DNA helicase n=2 Tax=Escherichia coli TaxID=562 Re... [more]
A0A2N6GMT4_9GAMM1.850e-4479.12DNA helicase n=1 Tax=Sedimenticola sp. TaxID=19402... [more]
A0A377B5R8_ECOLX2.500e-4472.53DNA helicase n=1 Tax=Escherichia coli TaxID=562 Re... [more]
A0A1G5QRN2_9GAMM4.830e-4478.02DNA helicase n=1 Tax=Thiohalomonas denitrificans T... [more]
T1CF86_9ZZZZ6.890e-4471.43DNA helicase (Fragment) n=1 Tax=mine drainage meta... [more]
A0A379SBL6_SALER7.920e-4472.53DNA helicase n=1 Tax=Salmonella enterica subsp. ar... [more]
A0A369CGU3_9GAMM9.410e-4478.02DNA helicase n=1 Tax=Thioalbus denitrificans TaxID... [more]
A0A377UUS3_KLEPN1.120e-4372.53DNA helicase n=1 Tax=Klebsiella pneumoniae TaxID=5... [more]
A0A349S3K0_9GAMM1.400e-4370.33DNA helicase (Fragment) n=1 Tax=Gammaproteobacteri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034739UvrD/AddA helicase, N-terminalPFAMPF00580UvrD-helicasecoord: 2..93
e-value: 9.2E-33
score: 114.1
NoneNo IPR availableGENE3D3.40.50.300coord: 19..93
e-value: 3.5E-36
score: 127.4
NoneNo IPR availablePANTHERPTHR11070:SF7DNA HELICASE IIcoord: 2..93
IPR013986DExx box DNA helicase domain superfamilyGENE3D1.10.10.160coord: 2..18
e-value: 3.5E-36
score: 127.4
IPR000212DNA helicase, UvrD/REP typePANTHERPTHR11070UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERcoord: 2..93
IPR014016UvrD-like helicase, ATP-binding domainPROSITEPS51198UVRD_HELICASE_ATP_BINDcoord: 1..93
score: 21.256
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114776contigM-pyrifera_M_contig114776:231..509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114776.3066.1mRNA_M-pyrifera_M_contig114776.3066.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114776 231..509 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114776.3066.1 ID=prot_M-pyrifera_M_contig114776.3066.1|Name=mRNA_M-pyrifera_M_contig114776.3066.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp
DAYQAYEDACARAGLVDFAELLLRAHELWRDTPGLLRHYRERFWHVLVDE
FQDTNTLQYAWLRQLVGDDGNLFVVGDDDQSIYSWRGAKVENM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034739UvrD/AddA_N
IPR013986DExx_box_DNA_helicase_dom_sf
IPR000212DNA_helicase_UvrD/REP
IPR014016UvrD-like_ATP-bd
IPR027417P-loop_NTPase