prot_M-pyrifera_M_contig114622.3044.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114622.3044.1
Unique Nameprot_M-pyrifera_M_contig114622.3044.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length176
Homology
BLAST of mRNA_M-pyrifera_M_contig114622.3044.1 vs. uniprot
Match: A0A3C1KS33_9GAMM (AAA domain-containing protein n=3 Tax=Haliea TaxID=475794 RepID=A0A3C1KS33_9GAMM)

HSP 1 Score: 280 bits (717), Expect = 2.850e-90
Identity = 157/174 (90.23%), Postives = 165/174 (94.83%), Query Frame = 0
Query:    2 PLHDGAEHAQDAIATEAQASPGVVRGRQHLTVVAGAGGVAARRTGTDEMPAEVEHASVEVDLPSSTMAETVVAAPPAHKPEPVEETAGANPEPVAPSEPSAEPVAARSAAKPAQKVASRRRDPAAKRAAGHAARAASEPPREHGGGWVIGLILLSSVALVAWAATGFSLGFFLE 175
            PLHDGAEHAQDAIATEAQASP VVRGRQHLTVVAGAGGVAARRTGTDEMPAEVEHA V+VDLPSST AET+VAAPP H+PEPVE++ GANPEPVA SE SAEPVAARSAA+PAQKV +RRRDPAAKRAAGHA RAASEPPREHGGGWVIGLIL+SSVALVAWAATGFSLGFFLE
Sbjct:  309 PLHDGAEHAQDAIATEAQASPAVVRGRQHLTVVAGAGGVAARRTGTDEMPAEVEHAPVDVDLPSSTSAETLVAAPPTHRPEPVEDSVGANPEPVARSERSAEPVAARSAARPAQKVPARRRDPAAKRAAGHAPRAASEPPREHGGGWVIGLILVSSVALVAWAATGFSLGFFLE 482          
BLAST of mRNA_M-pyrifera_M_contig114622.3044.1 vs. uniprot
Match: A0A355SVC9_9GAMM (ATPase n=6 Tax=Halieaceae TaxID=1706372 RepID=A0A355SVC9_9GAMM)

HSP 1 Score: 154 bits (390), Expect = 1.300e-41
Identity = 101/177 (57.06%), Postives = 121/177 (68.36%), Query Frame = 0
Query:    1 APLHDGAEHAQDAIATEAQASPGVVRGRQHLTVVAGAGGVAARRTGTDEMPAEVEHASVEVDLPSSTMAETVVAAPPAHKPEPVEETAGANPEPVAPSE--PSAEPVAARSAAKPAQKVASRRRDPAAKRAAGHAARAASEPPREHGGGWVIGLILLSSVALVAWAATGFSLGFFLE 175
            AP+ +  E AQ+AI  +AQ SP   RGRQHLTVVAGAGGVAARRTGTDE+  E  HA  EVD P+ T   +VVA+P  HK  P++    A P P A +    +A+P  A+ A +   K  +RRR  AA++    +AR  SEP  EHGGGWVIGLIL+SSVALVAWAATGFSLGFFLE
Sbjct:  309 APIDEAVESAQEAITPDAQVSPVTARGRQHLTVVAGAGGVAARRTGTDELAVETLHAPAEVDSPAPTAGASVVASP-LHKSAPLDGGENAEPVPAAAASRAQAAQPEDAKPATRAIPKRQARRRATAAQKPVAASARGTSEPSHEHGGGWVIGLILVSSVALVAWAATGFSLGFFLE 484          
BLAST of mRNA_M-pyrifera_M_contig114622.3044.1 vs. uniprot
Match: A0A2E7C7P8_9GAMM (AAA domain-containing protein n=2 Tax=Halieaceae TaxID=1706372 RepID=A0A2E7C7P8_9GAMM)

HSP 1 Score: 87.8 bits (216), Expect = 4.760e-17
Identity = 76/173 (43.93%), Postives = 90/173 (52.02%), Query Frame = 0
Query:    7 AEHAQDAIATEAQASPGVVRGRQHLTVVAGAGGVAARRTGTDEMPAEVEHASVEVDLPSST----MAETVVAAPPAHKPEPVEETAGANPEPVAPSEPSAEPVAARSAAKPAQKVASRRRDPAAKRAAGHAARAASEPPREHGGGWVIGLILLSSVALVAWAATGFSLGFFLE 175
            A  A DA+  + Q    VVRGRQHLTVVAGA GV ARRTGTDE      H  VE ++  +     M  T   AP        ++ A   P       P    VA+    + A     R   P      GH+A++   P  E GGGWVIG ILL+S+ALVAWAATGFS GFFLE
Sbjct:  323 AGRADDAV--QQQPEQQVVRGRQHLTVVAGAAGVTARRTGTDESVPTPIHGHVETEVAVTAAVDAMRATETIAPAPAPASTAQDAASDQPSVKGRPAPGGATVASGRTRRAAPAKKGRVTKPTTAARGGHSAQS---PGGELGGGWVIGGILLASIALVAWAATGFSFGFFLE 490          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114622.3044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A3C1KS33_9GAMM2.850e-9090.23AAA domain-containing protein n=3 Tax=Haliea TaxID... [more]
A0A355SVC9_9GAMM1.300e-4157.06ATPase n=6 Tax=Halieaceae TaxID=1706372 RepID=A0A3... [more]
A0A2E7C7P8_9GAMM4.760e-1743.93AAA domain-containing protein n=2 Tax=Halieaceae T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..147
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 175..175
NoneNo IPR availableTMHMMTMhelixcoord: 145..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114622contigM-pyrifera_M_contig114622:2..529 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114622.3044.1mRNA_M-pyrifera_M_contig114622.3044.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114622 2..529 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114622.3044.1 ID=prot_M-pyrifera_M_contig114622.3044.1|Name=mRNA_M-pyrifera_M_contig114622.3044.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
APLHDGAEHAQDAIATEAQASPGVVRGRQHLTVVAGAGGVAARRTGTDEM
PAEVEHASVEVDLPSSTMAETVVAAPPAHKPEPVEETAGANPEPVAPSEP
SAEPVAARSAAKPAQKVASRRRDPAAKRAAGHAARAASEPPREHGGGWVI
GLILLSSVALVAWAATGFSLGFFLE*
back to top