mRNA_M-pyrifera_M_contig1146.3039.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1146.3039.1
Unique NamemRNA_M-pyrifera_M_contig1146.3039.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1146.3039.1 vs. uniprot
Match: D7FGT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT1_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 9.980e-123
Identity = 190/337 (56.38%), Postives = 238/337 (70.62%), Query Frame = 1
Query:    1 LLLLSGVCHGLVQTCEQLQAAFNLTKTQDVVVEMHPFQDIECLTATTMSMNSNTLTVQSSENIENFHGTSNLYQVRFEVTNGATLIWETNVEFHGPTRQN--VNGGAVVVGEGSTVRFLNDLLMDDVSVLSVPEEDSDFAQYVLNGGCVYNNGYFRVDGDATFTKCEVTGGGESPPGDGGVLYVGQTGSVLFNGELEMKFVSITDDGGGDGGGIYNEGKVDLKGNAKFESLRARDGGALYNAADAQFRFTNQATALFIDCTLRDGVGSALYNAGNFKFSGPAIFIEQETPTIYVSSTGVTVLSENSVF--FDNKYGNPVIRVASGGVLDIPKSVSFL 999
            LL L GV HGL++TCE LQAAFNLT+TQDV+ E+HPFQDIEC T T M+M SNTLT+ SSEN++NF G+S+L  VR  VTNGA LIWET+V F G       V+GGAV VGEGSTV FLNDL M+D+ +++  +EDSDFA +V +GGCV+  G F VDG+ATFT+C++TG GESPPG GG +YVG TGSV FN  + +    ITDD GG GGGIYN G+V + G+++FE + A  G A+YN   A+F FTN A+A F D   RD VGS L N G F+FSGPA+F+E + P I  + T  T+LSENS F  FD ++G   + V       IP SV F+
Sbjct:   11 LLFLVGVAHGLIETCEDLQAAFNLTQTQDVIDEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHVNFIGDEEVELMVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISASSGVAIYNGEGAEFYFTNDASAFFRDLNNRDSVGSGLTNLGYFEFSGPALFVEADAPVIVATETSQTILSENSAFWTFDEEFGE-ALSVDEAADFTIPASVVFV 346          
BLAST of mRNA_M-pyrifera_M_contig1146.3039.1 vs. uniprot
Match: A0A6H5JCE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE5_9PHAE)

HSP 1 Score: 366 bits (939), Expect = 7.260e-122
Identity = 187/337 (55.49%), Postives = 240/337 (71.22%), Query Frame = 1
Query:    1 LLLLSGVCHGLVQTCEQLQAAFNLTKTQDVVVEMHPFQDIECLTATTMSMNSNTLTVQSSENIENFHGTSNLYQVRFEVTNGATLIWETNVEFHGPTRQN--VNGGAVVVGEGSTVRFLNDLLMDDVSVLSVPEEDSDFAQYVLNGGCVYNNGYFRVDGDATFTKCEVTGGGESPPGDGGVLYVGQTGSVLFNGELEMKFVSITDDGGGDGGGIYNEGKVDLKGNAKFESLRARDGGALYNAADAQFRFTNQATALFIDCTLRDGVGSALYNAGNFKFSGPAIFIEQETPTIYVSSTGVTVLSENSVFF--DNKYGNPVIRVASGGVLDIPKSVSFL 999
            LLL+ G CHGL++TC+ L AAF  T+T+DVVVEMHPF DIEC T T M+M SN+LTV SSENI+NF G+S+L  VR +VTNGA L WETNV F G    +  V+GGAV VGEGSTVRFLND+ M D+++++  +EDSDF+ +V +GGCV+  GYFRVDG+ATFT C+++G GESPPG GG +YVG+TGSVLFNG + +    ITDD GG GGGIYN GKV++KG+++FE + A  G A+YN   A F F + A A F D   RD  GSAL+N G FKFSGPA+F + E P I       T++SE+S F+  D   G+  + V  G    +P SV+F+
Sbjct:   92 LLLIPGACHGLIETCDDLLAAFEQTQTEDVVVEMHPFADIECETFTNMTMTSNSLTVSSSENIDNFSGSSSLVNVRLDVTNGAKLFWETNVIFEGDEETDLMVDGGAVYVGEGSTVRFLNDVQMQDIAIINERDEDSDFSSFVRSGGCVWTAGYFRVDGEATFTGCDISGAGESPPGPGGAVYVGETGSVLFNGGVTITDTHITDDFGGSGGGIYNLGKVNIKGDSRFEDISASSGVAIYNGEGATFNFRSGARAFFKDLNNRDSEGSALFNRGFFKFSGPALFFDAELPVIVAVDNSETIISEDSAFWTWDESPGD-ALSVNDGADFTLPDSVTFV 427          
BLAST of mRNA_M-pyrifera_M_contig1146.3039.1 vs. uniprot
Match: D7G2Y5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y5_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 2.690e-111
Identity = 186/335 (55.52%), Postives = 232/335 (69.25%), Query Frame = 1
Query:    1 LLLLSG-VCHGLVQTCEQLQAAFNLTKTQDVVVEMHPFQDIECLTATTMSMNSNTLTVQSSENIENFHGTSNLYQVRFEVTNGATLIWETNVEFHGPTRQNVNGGAVVVGEGSTVRFLNDLLMDDVSVLSVPEEDSDFAQYVLNGGCVYNNGYFRVDGDATFTKCEVTGGGESPPGDGGVLYVGQTGSVLFNGELEMKFVSITDDGGGDGGGIYNEGKVDLKGNAKFESLRARDGGALYNAADAQFRFTNQATALFIDCTLRDGVGSALYNAGNFKFSGPAIFIEQETPTIYVSSTGVTVLSENSVFFDN--KYGNPVIRVASGGVLDIPKSVSF 996
            LLL+SG VC G ++TC+ L  AF LT +QDVVVE+ P QDI C + TTMSM++N+LTV + +      G+  L +VRFEVT+GA L+W     F G   Q+VNGGAV VGEGS+ RF + L   +V V SVPEE SDFA Y L GGCVY +GYFRV+G A+F  CE +GGGES PG GGV+YVG+TGSVLF GE+ M+ VSI DD G +GGGIYN GKV++KGNA F++LRA  GGA++N + A+FRF   ATA FIDC   DG+G A++NAG FK SGPA  +E   PT  V S+G T LSE SVF  +   Y  P++ V  GG L     V+F
Sbjct:   12 LLLVSGSVCQGQLETCQDLLDAFALTASQDVVVEIQPGQDITCDSFTTMSMSANSLTVMTPDGQS---GSVGLNEVRFEVTDGAKLLWYPGASFTGTEYQDVNGGAVYVGEGSSARFYDTLTTSEVGVRSVPEEGSDFASYQLIGGCVYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNAVFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGIGGAVFNAGYFKLSGPAEVVECRAPTFVVGSSGYTRLSEGSVFNGDGSDYPEPIMFVMEGGRLTGVGKVTF 343          
BLAST of mRNA_M-pyrifera_M_contig1146.3039.1 vs. uniprot
Match: D7G0Q4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Q4_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 1.370e-110
Identity = 178/338 (52.66%), Postives = 230/338 (68.05%), Query Frame = 1
Query:    1 LLLLSGVCHGLVQTCEQLQAAFNLTKTQDVVVEMHPFQDIECLTATTMSMNSNTLTVQSSENIENFHGTSNLYQVRFEVTNGATLIWETNVEFHGP--TRQNVNGGAVVVGEGSTVRFLNDLLMDDVSVLSVPEEDSDFAQYVLNGGCVYNNGYFRVDGDATFTKCEVTGGGESPPGDGGVLYVGQTGSVLFNGELEMKFVSITDDGGGDGGGIYNEGKVDLKGNAKFESLRARDGGALYNAADAQFRFTNQATALFIDCTLRDGVGSALYNAGNFKFSGPAIFIEQETPTIYVSSTGVTVLSENSVF--FDNK-YGNPVIRVASGGVLDIPKSVSFL 999
            LL++ GV  GL++TCE LQAAF LT+TQDVV E+  F DIEC   T M+M SNTLT+ S+E++    G+++L  VR EVTNGA L+WET+V F G      NVNGG V VGEGSTVRFLND+ + DV + +  + DSD A +V +GGCV+  G+FRVDG+ATFT C + G GESPPG GG ++V  TGSVLFN  + +    IT+DGGGDGGGI+N GKV++KG+++FE L AR G A++N  DA F F N A+A F D + RD  GSAL N G FKFSGP +F++ E P I  +    T++S +S F  F+N       I VA    + IP SVSF+
Sbjct:   11 LLVIPGVARGLIETCEDLQAAFELTQTQDVVDEISTFGDIECPMFTNMTMTSNTLTLNSAEDLSITSGSTSLINVRLEVTNGAKLVWETSVFFLGDEEVENNVNGGGVFVGEGSTVRFLNDVQIRDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGTGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPVLFVDAEAPVIVATEGSTTIISRDSAFWMFENDDVTGEAISVADSAEVSIPGSVSFV 348          
BLAST of mRNA_M-pyrifera_M_contig1146.3039.1 vs. uniprot
Match: A0A6H5JYQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ0_9PHAE)

HSP 1 Score: 332 bits (850), Expect = 2.880e-106
Identity = 188/339 (55.46%), Postives = 230/339 (67.85%), Query Frame = 1
Query:    1 LLLLSG-VCHGLVQTCEQLQAAFNLTKTQDVVVEMHPFQDIECLTATTMSMNSNTLTVQSSENIENFHGTSNLYQVRFEVTNGATLIWETNVEFHGPTRQNVNGGAVVVGEGSTVRFLNDLLMDDVSVLSVPEEDSDFAQYVLNGGCV----YNNGYFRVDGDATFTKCEVTGGGESPPGDGGVLYVGQTGSVLFNGELEMKFVSITDDGGGDGGGIYNEGKVDLKGNAKFESLRARDGGALYNAADAQFRFTNQATALFIDCTLRDGVGSALYNAGNFKFSGPAIFIEQETPTIYVSSTGVTVLSENSVFFDN--KYGNPVIRVASGGVLDIPKSVSF 996
            LLL+SG VC G V+TC+ L  AF LT +QDVVVE+ P QDI C   TTMSM++N+LTV +++      G+  L +VRFEVT+GA L W     F     Q+VNGGAV VGEGST RF + L   +V V SVPEE SDFA Y L GGCV    Y +GYFRV+G A+F  CE +GGGES PG GGV+YVG+TGSVLF GE+ M+ VSI DD G +GGGIYN GKV++KGNA F++LRA  GGA++N + A+FRF   ATA FIDC   DG G A++NAG FK SGPA  +E   PT  V S+G T LSE SVF  +  +Y  P+I V  GG L     V+F
Sbjct:  242 LLLVSGSVCRGQVETCQDLLDAFALTASQDVVVEIQPGQDITCDNFTTMSMSANSLTVTATDGQS---GSVGLNEVRFEVTDGAKLFWHPGASFTETDYQDVNGGAVYVGEGSTARFYDTLTTSEVGVRSVPEEGSDFASYELIGGCVRAYTYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNALFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGTGGAVFNAGYFKLSGPAEVVECRAPTFVVGSSGYTRLSEGSVFNGDGYEYPEPIILVREGGRLTGVGKVTF 577          
BLAST of mRNA_M-pyrifera_M_contig1146.3039.1 vs. uniprot
Match: D7G1Q9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q9_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 6.890e-104
Identity = 174/337 (51.63%), Postives = 213/337 (63.20%), Query Frame = 1
Query:    1 LLLLSGVCHGLVQTCEQLQAAFNLTKTQDVVVEMHPFQDIECLTATTMSMNSNTLTVQSSENIENFHGTSNLYQVRFEVTNGATLIWETNVEFHGPTRQN--VNGGAVVVGEGSTVRFLNDLLMDDVSVLSVPEEDSDFAQYVLNGGCVYNNGYFRVDGDATFTKCEVTGGGESPPGDGGVLYVGQTGSVLFNGELEMKFVSITDDGGGDGGGIYNEGKVDLKGNAKFESLRARDGGALYNAADAQFRFTNQATALFIDCTLRDGVGSALYNAGNFKFSGPAIFIEQETPTIYVSSTGVTVLSENSVFF--DNKYGNPVIRVASGGVLDIPKSVSFL 999
            LLL+ G CHGL++TC+ L AAF  T+T+DVVVEMHPF DIEC T T M+M SNTL                            TL WETNV F G       V+GGAV VGEGSTVRFLND+ M DV +++  +EDSDFA +V +GGCV+  GYFRVDG+ATFT C++ G GESPPG GG +YVG+TGSVLFN  + +   SITDD GG GGGIYN GKV++KG+++FE + A  G A+YN   A F F N A A F D   RD  GSAL N G FKFSGPA F + E P I       T+LSE+S F+  D   G+  + V  G    +P SV+F+
Sbjct:   11 LLLMPGTCHGLIETCDDLLAAFEQTQTEDVVVEMHPFADIECDTFTNMTMTSNTL----------------------------TLFWETNVIFEGDEEAELMVDGGAVYVGEGSTVRFLNDVQMRDVVIINERDEDSDFASFVRSGGCVWTAGYFRVDGEATFTGCDIIGAGESPPGPGGAVYVGETGSVLFNEGVTITETSITDDFGGKGGGIYNLGKVNIKGDSRFEEISASAGVAIYNGEGATFNFRNGAGAFFRDLNNRDSEGSALVNLGFFKFSGPAFFFDAELPVIVAMDNSETILSEDSAFWTWDESPGD-ALTVNEGADFTLPDSVTFV 318          
BLAST of mRNA_M-pyrifera_M_contig1146.3039.1 vs. uniprot
Match: D8LG63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG63_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 3.250e-53
Identity = 91/167 (54.49%), Postives = 116/167 (69.46%), Query Frame = 1
Query:  364 MDDVSVLSVPEEDSDFAQYVLNGGCVYNNGYFRVDGDATFTKCEVTGGGESPPGDGGVLYVGQTGSVLFNGELEMKFVSITDDGGGDGGGIYNEGKVDLKGNAKFESLRARDGGALYNAADAQFRFTNQATALFIDCTLRDGVGSALYNAGNFKFSGPAIFIEQETP 864
            M DV +++  +EDSD+A Y  +GGCV   G F V+GDATFT CE  G GES PG GG ++V +TGSV F+  + +   SITDD GG GGGIYN G+V++ G ++FE + A  G A+YN   AQ RFTN ATA F D + RD VGSALY  G F+FSGPA+F+E +TP
Sbjct:    1 MRDVGIINETDEDSDYASYQHSGGCVRTAGTFTVNGDATFTGCESVGAGESAPGPGGAIFVSETGSVSFSEGVTIMETSITDDFGGQGGGIYNLGEVNVAGGSRFEDISASSGVAVYNGEGAQLRFTNGATACFRDLSNRDSVGSALYYLGYFEFSGPALFVEADTP 167          
BLAST of mRNA_M-pyrifera_M_contig1146.3039.1 vs. uniprot
Match: D8LU56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU56_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.010e-23
Identity = 86/292 (29.45%), Postives = 129/292 (44.18%), Query Frame = 1
Query:  166 TVQSSENIENFHGTSNLY-QVRFEVTNGATLIWETNVEFHGPTRQNVNGGAVVVGEGSTVRFLNDLLMDDVSVLSVPEEDSDFAQYVLNGGCVYNNGYFRVDGDATFTKCEVTGGGESP--PGDGGVLYVGQTGSVLFNGELEMKFVSITD------DGGGDGGGIYNEGKVDLKGNAKFESLRARDGGALYNAADAQFRFTNQATALFIDCTLRDGVGSALYNAGNFKFSGPAIFIEQETP----TIYVSSTGVTVLSENSVFFDNKYG--NPVIRVASGGVLDIPKSVSF 996
            TV+  +N   F G+   +   RF V  GA L  +  +   G   Q VNGG + V +G   RFL+ + M+DV VLSV EE       +++GGCVYN G  R +G  +   C+      +   PGDGG L+ G  G ++F   +EMK              G DGG IY +GKV    +A+F    A +GGA+    D + +F  +A   F      +G G  + N G        +F +         IY       +  ++  F DN  G     I  +   + D+P+  ++
Sbjct:   61 TVEVGQNKLKFVGSGATFTSARFVVAAGAVLRADVPLVLTGDQTQAVNGGLLNVADGGKARFLDSVAMNDVGVLSVSEEA------MVHGGCVYNEGLIRFEGTFSADGCKTVSSDTASVIPGDGGGLWNGPGGKIVFKEAVEMKNCGERTGLRSWRSQGLDGGAIYTDGKVSFYEDAQFTDNEADEGGAICIGVDGELKFLKKAKVTFTGNN-SEGSGGHINNDGTLVLRNTGVFSDGYAGGSGGAIYAGDFSSMLFVKHVDFLDNTAGAHGGAIATSYPNIDDLPEDATY 345          
BLAST of mRNA_M-pyrifera_M_contig1146.3039.1 vs. uniprot
Match: D7FSQ1_ECTSI (Adhesin-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ1_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.370e-21
Identity = 87/281 (30.96%), Postives = 128/281 (45.55%), Query Frame = 1
Query:   34 VQTCEQLQAAFNLTKTQDVVVEMHPFQDIECLTATTMSMNSNTLTVQSSENIENFHGTSNLYQVRFEVTNGATLIWETNVEFHGPTRQNVNGGAVVVGEGSTVRFLNDLLMDDVSVLSVPEEDSDFAQYVLNGGCVYNNGYFRVDGDATFTKCEVTGGGE----SPPGDGGVLYVGQTGSVLFNGELEMKFVSI---TDDG---GGDGGGIYNEGKVDLKGNAKFESLRARDGGALYNAADAQFRFTNQATALFIDCTLRDGVGSALYNAGNFKFSGPAIF 846
            +  C +LQAA   T T   V+     ++I C    ++ +  N L +   + +     T    +VRF V +GA L  +  VEF G   Q V+GG + V EG   RFL+ + MD + V +V   D      + +GGCVYN GY R +G+     CE     E    +  G+G  ++ G+   V+F   +EM F      T +G   G DGG IY++G+V    +A F +  A +GGAL+       +F   A A F       G G  + N G       A F
Sbjct:   28 ISNCAELQAAAEATATVGNVLGQLVEEEIFCDEWLSVEIPENKLKLDGDDGV-----TYKFDKVRFVVKSGAILRVDVPVEFTGDRTQVVHGGVLNVEEGGKARFLSSVSMDGIGVDTVDLAD------MKHGGCVYNQGYVRFEGEFYANGCETVSTIEEYRVAMAGNGAGIWNGKDAKVVFKEAVEMDFCGNWPWTSNGAEPGSDGGAIYSDGEVSFFEDALFTNNEADEGGALWIGVTGVVKFLKSAKATF-QSNSGPGNGGTINNYGVLVMRNTASF 296          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1146.3039.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FGT1_ECTSI9.980e-12356.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCE5_9PHAE7.260e-12255.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2Y5_ECTSI2.690e-11155.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0Q4_ECTSI1.370e-11052.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYQ0_9PHAE2.880e-10655.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1Q9_ECTSI6.890e-10451.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LG63_ECTSI3.250e-5354.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU56_ECTSI1.010e-2329.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSQ1_ECTSI1.370e-2130.96Adhesin-like protein n=2 Tax=Ectocarpus TaxID=2879... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1146contigM-pyrifera_M_contig1146:7385..8383 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons1
Model size999
Cds size999
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815662.1186855-CDS-M-pyrifera_M_contig1146:7384..83831622815662.1186855-CDS-M-pyrifera_M_contig1146:7384..8383Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1146 7385..8383 -
1692277510.2500901-CDS-M-pyrifera_M_contig1146:7384..83831692277510.2500901-CDS-M-pyrifera_M_contig1146:7384..8383Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1146 7385..8383 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1146.3039.1prot_M-pyrifera_M_contig1146.3039.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1146 7385..8383 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1146.3039.1

>prot_M-pyrifera_M_contig1146.3039.1 ID=prot_M-pyrifera_M_contig1146.3039.1|Name=mRNA_M-pyrifera_M_contig1146.3039.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=333bp
LLLLSGVCHGLVQTCEQLQAAFNLTKTQDVVVEMHPFQDIECLTATTMSM
NSNTLTVQSSENIENFHGTSNLYQVRFEVTNGATLIWETNVEFHGPTRQN
VNGGAVVVGEGSTVRFLNDLLMDDVSVLSVPEEDSDFAQYVLNGGCVYNN
GYFRVDGDATFTKCEVTGGGESPPGDGGVLYVGQTGSVLFNGELEMKFVS
ITDDGGGDGGGIYNEGKVDLKGNAKFESLRARDGGALYNAADAQFRFTNQ
ATALFIDCTLRDGVGSALYNAGNFKFSGPAIFIEQETPTIYVSSTGVTVL
SENSVFFDNKYGNPVIRVASGGVLDIPKSVSFL
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mRNA from alignment at M-pyrifera_M_contig1146:7385..8383-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1146.3039.1 ID=mRNA_M-pyrifera_M_contig1146.3039.1|Name=mRNA_M-pyrifera_M_contig1146.3039.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=999bp|location=Sequence derived from alignment at M-pyrifera_M_contig1146:7385..8383- (Macrocystis pyrifera P11B4 male)
CTTCTACTGCTCTCGGGCGTCTGCCACGGTTTGGTGCAAACGTGCGAGCA GCTGCAGGCGGCGTTCAACTTGACTAAGACGCAGGATGTCGTCGTGGAAA TGCACCCCTTCCAAGACATCGAATGTCTCACTGCCACCACAATGAGTATG AACTCCAACACCCTCACGGTGCAATCAAGCGAGAACATTGAAAACTTCCA TGGAACCTCGAATCTGTACCAGGTCCGATTTGAGGTGACGAACGGTGCAA CGTTAATCTGGGAAACGAATGTGGAGTTCCACGGGCCGACCAGGCAGAAC GTCAACGGCGGAGCGGTTGTCGTGGGAGAGGGCTCGACCGTTCGTTTCTT GAACGACCTGTTGATGGACGACGTCAGCGTCCTCAGCGTTCCGGAAGAGG ACTCAGATTTTGCGCAATACGTCCTCAACGGAGGTTGTGTCTACAACAAC GGCTATTTCAGGGTAGACGGCGACGCAACGTTCACCAAGTGCGAAGTGAC GGGTGGCGGGGAGAGTCCCCCGGGCGATGGCGGCGTGCTGTACGTCGGCC AAACGGGCTCCGTGCTGTTCAACGGTGAGTTGGAGATGAAGTTTGTGTCC ATCACCGATGACGGCGGCGGCGACGGAGGAGGCATCTACAACGAGGGCAA GGTCGACCTGAAGGGAAACGCCAAGTTCGAATCTCTCCGGGCTAGGGACG GTGGCGCCCTCTACAACGCCGCCGACGCCCAGTTCAGGTTTACGAACCAG GCAACCGCCCTGTTCATTGACTGCACGTTGCGCGATGGTGTCGGTAGCGC ATTGTACAACGCTGGAAACTTTAAGTTTTCGGGTCCAGCTATTTTCATCG AGCAGGAAACTCCCACTATCTATGTTTCATCTACAGGTGTGACCGTACTT TCCGAGAATTCGGTGTTCTTTGACAACAAGTACGGCAATCCGGTTATTCG CGTCGCCTCTGGGGGTGTCCTCGACATCCCCAAGTCCGTTTCGTTCCTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1146:7385..8383-

>mRNA_M-pyrifera_M_contig1146.3039.1 ID=mRNA_M-pyrifera_M_contig1146.3039.1|Name=mRNA_M-pyrifera_M_contig1146.3039.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1998bp|location=Sequence derived from alignment at M-pyrifera_M_contig1146:7385..8383- (Macrocystis pyrifera P11B4 male)
CTTCTACTGCTCTCGGGCGTCTGCCACGGTTTGGTGCAAACGTGCGAGCA
GCTGCAGGCGGCGTTCAACTTGACTAAGACGCAGGATGTCGTCGTGGAAA
TGCACCCCTTCCAAGACATCGAATGTCTCACTGCCACCACAATGAGTATG
AACTCCAACACCCTCACGGTGCAATCAAGCGAGAACATTGAAAACTTCCA
TGGAACCTCGAATCTGTACCAGGTCCGATTTGAGGTGACGAACGGTGCAA
CGTTAATCTGGGAAACGAATGTGGAGTTCCACGGGCCGACCAGGCAGAAC
GTCAACGGCGGAGCGGTTGTCGTGGGAGAGGGCTCGACCGTTCGTTTCTT
GAACGACCTGTTGATGGACGACGTCAGCGTCCTCAGCGTTCCGGAAGAGG
ACTCAGATTTTGCGCAATACGTCCTCAACGGAGGTTGTGTCTACAACAAC
GGCTATTTCAGGGTAGACGGCGACGCAACGTTCACCAAGTGCGAAGTGAC
GGGTGGCGGGGAGAGTCCCCCGGGCGATGGCGGCGTGCTGTACGTCGGCC
AAACGGGCTCCGTGCTGTTCAACGGTGAGTTGGAGATGAAGTTTGTGTCC
ATCACCGATGACGGCGGCGGCGACGGAGGAGGCATCTACAACGAGGGCAA
GGTCGACCTGAAGGGAAACGCCAAGTTCGAATCTCTCCGGGCTAGGGACG
GTGGCGCCCTCTACAACGCCGCCGACGCCCAGTTCAGGTTTACGAACCAG
GCAACCGCCCTGTTCATTGACTGCACGTTGCGCGATGGTGTCGGTAGCGC
ATTGTACAACGCTGGAAACTTTAAGTTTTCGGGTCCAGCTATTTTCATCG
AGCAGGAAACTCCCACTATCTATGTTTCATCTACAGGTGTGACCGTACTT
TCCGAGAATTCGGTGTTCTTTGACAACAAGTACGGCAATCCGGTTATTCG
CGTCGCCTCTGGGGGTGTCCTCGACATCCCCAAGTCCGTTTCGTTCCTTC
TTCTACTGCTCTCGGGCGTCTGCCACGGTTTGGTGCAAACGTGCGAGCAG
CTGCAGGCGGCGTTCAACTTGACTAAGACGCAGGATGTCGTCGTGGAAAT
GCACCCCTTCCAAGACATCGAATGTCTCACTGCCACCACAATGAGTATGA
ACTCCAACACCCTCACGGTGCAATCAAGCGAGAACATTGAAAACTTCCAT
GGAACCTCGAATCTGTACCAGGTCCGATTTGAGGTGACGAACGGTGCAAC
GTTAATCTGGGAAACGAATGTGGAGTTCCACGGGCCGACCAGGCAGAACG
TCAACGGCGGAGCGGTTGTCGTGGGAGAGGGCTCGACCGTTCGTTTCTTG
AACGACCTGTTGATGGACGACGTCAGCGTCCTCAGCGTTCCGGAAGAGGA
CTCAGATTTTGCGCAATACGTCCTCAACGGAGGTTGTGTCTACAACAACG
GCTATTTCAGGGTAGACGGCGACGCAACGTTCACCAAGTGCGAAGTGACG
GGTGGCGGGGAGAGTCCCCCGGGCGATGGCGGCGTGCTGTACGTCGGCCA
AACGGGCTCCGTGCTGTTCAACGGTGAGTTGGAGATGAAGTTTGTGTCCA
TCACCGATGACGGCGGCGGCGACGGAGGAGGCATCTACAACGAGGGCAAG
GTCGACCTGAAGGGAAACGCCAAGTTCGAATCTCTCCGGGCTAGGGACGG
TGGCGCCCTCTACAACGCCGCCGACGCCCAGTTCAGGTTTACGAACCAGG
CAACCGCCCTGTTCATTGACTGCACGTTGCGCGATGGTGTCGGTAGCGCA
TTGTACAACGCTGGAAACTTTAAGTTTTCGGGTCCAGCTATTTTCATCGA
GCAGGAAACTCCCACTATCTATGTTTCATCTACAGGTGTGACCGTACTTT
CCGAGAATTCGGTGTTCTTTGACAACAAGTACGGCAATCCGGTTATTCGC
GTCGCCTCTGGGGGTGTCCTCGACATCCCCAAGTCCGTTTCGTTCCTT
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