prot_M-pyrifera_M_contig11450.3024.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11450.3024.1
Unique Nameprot_M-pyrifera_M_contig11450.3024.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length103
Homology
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BLAST of mRNA_M-pyrifera_M_contig11450.3024.1 vs. uniprot
Match: A0A6H5J5T1_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5T1_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 7.170e-41
Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = 0 
Query:    1 RAGELVLQIPPALWLPYCAEAAVRKAEAGAPDVLARVNNVCASFRGASASTMVRVTCLALEILFTLERDVREPYLGLLWDASRSAASLPHPLLMGPRHLDHLQ 103
            R GE +L++PPA+WLPYCAEAAVRKAEAGAPD LAR++N CA   G  A  +  V CLALE+LFTLERD REPYLGLLW+AS S  +LPHPLLMGP HLD LQ
Sbjct:   80 RVGEELLRVPPAVWLPYCAEAAVRKAEAGAPDFLARLSNTCAKIGGGDALEVAPVACLALELLFTLERDAREPYLGLLWEASTSEDALPHPLLMGPDHLDLLQ 182
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BLAST of mRNA_M-pyrifera_M_contig11450.3024.1 vs. uniprot
Match: D7G0R8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R8_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 1.200e-38
Identity = 75/132 (56.82%), Postives = 85/132 (64.39%), Query Frame = 0 
Query:    1 RAGELVLQIPPALWLPYCAEAAVRKAEAGAPDVLARVNNVCASFRGASASTMVRVTCLALEILFTLER-----------------------------DVREPYLGLLWDASRSAASLPHPLLMGPRHLDHLQ 103
            RAGE +L++PPA+WLPYCAEAAVRKAEAGAPD LAR++N CA   G  AS +  V CLALE+LFTLER                             D REPYLGLLW+AS S  +LPHPLLMGP HLD LQ
Sbjct:   66 RAGEELLRVPPAVWLPYCAEAAVRKAEAGAPDFLARLSNTCAKIGGGDASKVAPVACLALELLFTLERIAKIVFTPQYSIEKEAGETFEKRHDNGARDAREPYLGLLWEASASEDALPHPLLMGPEHLDLLQ 197
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11450.3024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J5T1_9PHAE7.170e-4170.87SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0R8_ECTSI1.200e-3856.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11450contigM-pyrifera_M_contig11450:355..7513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11450.3024.1mRNA_M-pyrifera_M_contig11450.3024.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11450 355..7513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11450.3024.1 ID=prot_M-pyrifera_M_contig11450.3024.1|Name=mRNA_M-pyrifera_M_contig11450.3024.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp
RAGELVLQIPPALWLPYCAEAAVRKAEAGAPDVLARVNNVCASFRGASAS
TMVRVTCLALEILFTLERDVREPYLGLLWDASRSAASLPHPLLMGPRHLD
HLQ
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