prot_M-pyrifera_M_contig114366.3003.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114366.3003.1
Unique Nameprot_M-pyrifera_M_contig114366.3003.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length56
Homology
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BLAST of mRNA_M-pyrifera_M_contig114366.3003.1 vs. uniprot
Match: A0A0W0YVS3_9GAMM (Uncharacterized protein n=1 Tax=Legionella shakespearei DSM 23087 TaxID=1122169 RepID=A0A0W0YVS3_9GAMM)

HSP 1 Score: 48.5 bits (114), Expect = 9.530e-6
Identity = 31/62 (50.00%), Postives = 36/62 (58.06%), Query Frame = 0 
Query:    1 ADLQSAPFNHSGNSP--ILTSLSANRITSYLLCTPAQR----RGSNPRPADYKSAALPTELR 56
            +DLQS PF+ SG  P   L S     ++ YLL  P  R    + SNP P DYKS ALPTELR
Sbjct:   42 SDLQSDPFDRSGTPPKRTLFSFKIKGMSIYLLTFPLLRWCWHQESNPGPTDYKSVALPTELR 103
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114366.3003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0W0YVS3_9GAMM9.530e-650.00Uncharacterized protein n=1 Tax=Legionella shakesp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114366contigM-pyrifera_M_contig114366:238..450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114366.3003.1mRNA_M-pyrifera_M_contig114366.3003.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114366 238..450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114366.3003.1 ID=prot_M-pyrifera_M_contig114366.3003.1|Name=mRNA_M-pyrifera_M_contig114366.3003.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=56bp
ADLQSAPFNHSGNSPILTSLSANRITSYLLCTPAQRRGSNPRPADYKSAA
LPTELR
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