mRNA_M-pyrifera_M_contig114291.2975.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: UPI001F3E1E56 (ABC transporter permease n=1 Tax=Rhodohalobacter sp. 614A TaxID=2908649 RepID=UPI001F3E1E56) HSP 1 Score: 280 bits (715), Expect = 1.420e-86 Identity = 136/190 (71.58%), Postives = 162/190 (85.26%), Query Frame = 1
Query: 1 GVGKTVTFGANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELDFIPF 570
G KTVTFGA DNP T IVGVV DFHFATV+HEVEPLIMFYS +LP +S+K+ ++L+S + +IE +W S L N F++ FLD++FAQQYNTEQTL+++IRHFS+LAI IAA+GLFILSVFTVQQRRKEIGIRKVLGSTT GISLLL KDFLKWIL+SN+I LP+AWYFL WL+NF+YRI+LDF PF
Sbjct: 572 GTDKTVTFGATSDNPTTLSIVGVVGDFHFATVRHEVEPLIMFYSRALPTLSIKLDTQNLNSTLSEIENVWKSFLTNRSFEFDFLDESFAQQYNTEQTLSQMIRHFSLLAIAIAAIGLFILSVFTVQQRRKEIGIRKVLGSTTGGISLLLSKDFLKWILLSNIISLPIAWYFLREWLANFRYRIDLDFYPF 761
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: A0A2D8CJ19_9BACT (Uncharacterized protein n=3 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CJ19_9BACT) HSP 1 Score: 277 bits (709), Expect = 1.080e-85 Identity = 136/190 (71.58%), Postives = 161/190 (84.74%), Query Frame = 1
Query: 1 GVGKTVTFGANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELDFIPF 570
G KT+TFGAN +NP T IVGVV DFHFATV+HEVEPLIMFY +LP VS+K+ +++S+ + ++EEIWSS L N F+Y FLDDTFAQQYNTEQTL+++IRHFSILAI IAA+GLFILSVFTVQQRRKEIGIRKVLGSTT GI +LL KDFLKWIL+SN+I LP+AWY L WL+NF+YRI+LD PF
Sbjct: 572 GTNKTLTFGANSENPTTLNIVGVVEDFHFATVRHEVEPLIMFYGEALPTVSLKIDDQNISNTLTEVEEIWSSFLPNRSFEYNFLDDTFAQQYNTEQTLSQMIRHFSILAISIAAIGLFILSVFTVQQRRKEIGIRKVLGSTTTGIGVLLSKDFLKWILLSNIISLPVAWYLLREWLANFRYRIDLDVYPF 761
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: A0A4U6DBI4_9BACT (FtsX-like permease family protein n=4 Tax=Dyadobacter TaxID=120831 RepID=A0A4U6DBI4_9BACT) HSP 1 Score: 167 bits (422), Expect = 1.430e-44 Identity = 86/184 (46.74%), Postives = 123/184 (66.85%), Query Frame = 1
Query: 4 VGKTVTFGANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIEL 555
VG+ +T N N N EI+GVV DFHF ++K ++E L M +S IVS+K+G AI I ++W+SL N P YTF+D F++ Y+ L +I F+ILAI++A++GLF LS F V+QRRKEIGIRKVLG++ Q I LL ++FL +L+S +I P+AWY + WL ++KYRI++
Sbjct: 592 VGQYITNQTN--NGNKLEIIGVVEDFHFESMKDDIEGLCMSLGSSPSIVSIKIGTSDTKGAIQSISKVWNSLAPNQPIRYTFMDQNFSKMYDDVNRLGQIFSSFAILAIIVASLGLFALSAFMVEQRRKEIGIRKVLGASVQSILGLLTRNFLVLVLISAIIASPIAWYIMQKWLQDYKYRIDI 773
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: A0A6C0GQT6_9BACT (FtsX-like permease family protein n=1 Tax=Rhodocytophaga rosea TaxID=2704465 RepID=A0A6C0GQT6_9BACT) HSP 1 Score: 166 bits (421), Expect = 1.830e-44 Identity = 79/185 (42.70%), Postives = 119/185 (64.32%), Query Frame = 1
Query: 4 VGKTVTFGANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELD 558
+GKT+ + ++VG+V DFHFAT++H+VEP+ M Y+ +++K+ ++ + I + W + TP++Y FLD FA Y +EQT A + HF++LA+ IA +GL LS FT QQRRKEI IRKVLG+ I LL KDFL+ +LV+ +I +P+AWYF+ WL +F YR +++
Sbjct: 573 IGKTIRLETGQNQFTAYQVVGLVKDFHFATIRHKVEPVFMLYNKDNSQLAIKISTANVPGTLDFIGQTWKRINAETPYEYNFLDADFANLYRSEQTFATMFSHFTVLALFIAVLGLLGLSAFTAQQRRKEISIRKVLGADVSQIIFLLSKDFLQLVLVAVIIAIPIAWYFMRKWLEDFAYRTDMN 757
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: A0A7X4FIZ5_9BACT (FtsX-like permease family protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4FIZ5_9BACT) HSP 1 Score: 162 bits (410), Expect = 5.960e-43 Identity = 81/168 (48.21%), Postives = 119/168 (70.83%), Query Frame = 1
Query: 58 IVGVVSDFHFATVKHEVEPLIMFYSNSLPI-VSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELD 558
I+GVVSDFH ++K E+EPL++ Y + P+ +++++ +++ AI +EE W L N PF YTFLD +A+ YN EQ ++ + + FS LAI+IA +GLF L+ FT QQR KEIGIRK+LG++ GI LL KDFLK +L++NL+ P+A+Y ++ WL +F YRI L
Sbjct: 588 IIGVVSDFHIGSLKQEIEPLVLPYLHRSPMYLAIRLHPGNVAEAISAVEETWKKLAPNQPFSYTFLDQDYARLYNREQQMSHVFQIFSGLAILIACLGLFGLAAFTTQQRTKEIGIRKILGASVSGIVCLLSKDFLKLVLIANLVAWPIAYYAMNQWLQSFAYRINLS 755
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: UPI001687BB3A (ABC transporter permease n=1 Tax=Spirosoma profusum TaxID=2771354 RepID=UPI001687BB3A) HSP 1 Score: 162 bits (410), Expect = 6.050e-43 Identity = 81/186 (43.55%), Postives = 120/186 (64.52%), Query Frame = 1
Query: 4 VGKTVTFGANGDNPN---TQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIE 552
+GKT+ G PN + ++G+V DFHFATV+H+VEPL M YS + VK+ + + IE+ W + TPF+Y+FLD+ F + Y +EQ A + HF++LA+ IA +GLF L+ FT +QR+KEIGIR+VLG+ T + LL KDF+K +L++ ++ PLAWY ++ WL F YR +
Sbjct: 573 IGKTIRL-QTGPTPNDLTSYNVIGLVKDFHFATVRHKVEPLFMLYSKINGQLIVKMNTANAPQTLSFIEQTWKQINPETPFEYSFLDEDFGKLYRSEQAFATMFSHFTVLALFIALLGLFGLAAFTAEQRQKEIGIRRVLGAETGSLLYLLSKDFVKLVLIAFVVATPLAWYLMNRWLEGFAYRTD 757
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: UPI000FFC6971 (ABC transporter permease n=1 Tax=Larkinella soli TaxID=1770527 RepID=UPI000FFC6971) HSP 1 Score: 162 bits (410), Expect = 6.050e-43 Identity = 81/191 (42.41%), Postives = 123/191 (64.40%), Query Frame = 1
Query: 4 VGKTVTF--GANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELDFIPF 570
VGKTV G + ++VG+V DFHFAT++H+VEPL M ++ + ++VK+ + + IE+ W + TP+D++FLD+ F + Y +EQ A + HF+ILA+ IA +GLF L+ FT +QRRKEIGIR+VLG+ T + LL KDF++ +LV+ ++ PLAWY + WL+ F YR + + F
Sbjct: 573 VGKTVRLQTGPTPTDLTAYKVVGLVKDFHFATIRHKVEPLFMLFNRNNGQLAVKINTANAPETLAFIEQTWKRINPETPYDFSFLDEDFGKLYRSEQAFATMFSHFTILALFIAVLGLFGLAAFTAEQRRKEIGIRRVLGAETGSLLFLLSKDFVRLVLVAFVVASPLAWYLMDRWLAGFAYRTDQSAVLF 763
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: A0A3N5Q0Q4_9BACT (FtsX-like permease family protein (Fragment) n=1 Tax=Ignavibacteriales bacterium TaxID=2049428 RepID=A0A3N5Q0Q4_9BACT) HSP 1 Score: 156 bits (394), Expect = 1.570e-42 Identity = 86/193 (44.56%), Postives = 129/193 (66.84%), Query Frame = 1
Query: 4 VGKTVTFGANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMF----YSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELDFIPF 570
VGK F NG NP T +VGVV DFHFA+++H++EP+++ ++N+ +V++ ++S A+ IEE W+ + PF+Y+FLDD F + Y +EQ A++I F+ LAI IA +GLF L+ + +QR KEIGIRKVLG++ I LL K F+ +LV+N+I PLA+YF+S WL +F+YRI + + F
Sbjct: 194 VGKK--FNPNGQNPLT--VVGVVKDFHFASMRHKIEPMMIVNQAQFNNTA---AVRINAGNISRAVSAIEEAWNKINPGRPFEYSFLDDEFNELYKSEQNFAELIVGFTWLAIFIACLGLFGLASYMTEQRTKEIGIRKVLGASVGNILLLTTKQFILLVLVANIIAWPLAYYFMSNWLLDFQYRINIGYETF 379
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: A0A6C0GR84_9BACT (FtsX-like permease family protein n=1 Tax=Rhodocytophaga rosea TaxID=2704465 RepID=A0A6C0GR84_9BACT) HSP 1 Score: 160 bits (405), Expect = 3.070e-42 Identity = 80/179 (44.69%), Postives = 124/179 (69.27%), Query Frame = 1
Query: 37 DNPNTQEIVGVVSDFHFATVKHEVEPLIM-FYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELDFIPF 570
D+ +++GVV DFH+ ++ ++EPL++ Y ++ + VK+ E++ + + +E W+ L N PF+YTFLD+ FA++Y +EQ +K+ F++L+I IA +GLF L+ FT QR KEIGIRKVLG++ GI LL KDFLK +L+S +I +PLAWY +S WL +F YRI++D+ F
Sbjct: 597 DSLKRGKVIGVVKDFHYKSLHQKIEPLVLHIYPSAFEDIVVKIRPENMKATLAFLENKWTKLDANWPFEYTFLDEQFARKYESEQIFSKVFITFTLLSIFIACLGLFGLASFTAGQRSKEIGIRKVLGASVPGIVFLLSKDFLKLVLLSLVIAVPLAWYAMSSWLEDFAYRIDMDWWVF 775
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: A0A3P1BGE6_9BACT (ABC transporter permease n=2 Tax=Larkinella TaxID=332157 RepID=A0A3P1BGE6_9BACT) HSP 1 Score: 159 bits (403), Expect = 5.540e-42 Identity = 79/191 (41.36%), Postives = 122/191 (63.87%), Query Frame = 1
Query: 4 VGKTVTF--GANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELDFIPF 570
+GK V G N + +VG+V DFHFAT++H+VEPL M Y+ + ++VK+ + + IE+ W + TP+DY+F+D F + Y +EQ A + HF++LA+ IA +GLF L+ FT +QRRKEIGIR+VLG+ T + LL ++F+K ++++ +I PLAWY ++ WL+ F YR + I F
Sbjct: 573 IGKIVRLPSGPNPTDATPYTVVGLVKDFHFATIRHKVEPLFMLYNKNNNQLAVKINTANAPETLAFIEKTWKQVNPETPYDYSFMDADFGKLYRSEQAFATMFSHFTVLALFIAVLGLFGLAAFTAEQRRKEIGIRRVLGAETGSLLYLLSREFIKLVVIAFVIASPLAWYLMNRWLNGFAYRTDQSAILF 763 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114291.2975.1 >prot_M-pyrifera_M_contig114291.2975.1 ID=prot_M-pyrifera_M_contig114291.2975.1|Name=mRNA_M-pyrifera_M_contig114291.2975.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=190bp GVGKTVTFGANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVback to top mRNA from alignment at M-pyrifera_M_contig114291:3..572- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114291.2975.1 ID=mRNA_M-pyrifera_M_contig114291.2975.1|Name=mRNA_M-pyrifera_M_contig114291.2975.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig114291:3..572- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114291:3..572- >mRNA_M-pyrifera_M_contig114291.2975.1 ID=mRNA_M-pyrifera_M_contig114291.2975.1|Name=mRNA_M-pyrifera_M_contig114291.2975.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1140bp|location=Sequence derived from alignment at M-pyrifera_M_contig114291:3..572- (Macrocystis pyrifera P11B4 male)back to top |