prot_M-pyrifera_M_contig114201.2959.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114201.2959.1
Unique Nameprot_M-pyrifera_M_contig114201.2959.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length190
Homology
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A5A8CZ36_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CZ36_CAFRO)

HSP 1 Score: 161 bits (408), Expect = 2.720e-45
Identity = 80/125 (64.00%), Postives = 96/125 (76.80%), Query Frame = 0
Query:   68 LFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVFSPQSNV--LLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGANEAAVRCI 190
            LFATG QDGHVRVWD+R +RAVANVA HV   GAGAVGD+     ++   ++++GAD  VCV+D RRGF VR   +EH+D++YSL V G + LSGAGDGTL AHD+  G PLWALGANEAAVRCI
Sbjct:  195 LFATGAQDGHVRVWDLRARRAVANVAVHVTEAGAGAVGDIGVCTATSPFDVVTSGADQRVCVLDSRRGFSVRWSMDEHRDYVYSLAVGGRIALSGAGDGTLLAHDVVAGRPLWALGANEAAVRCI 319          
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A5A8DFF4_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DFF4_CAFRO)

HSP 1 Score: 161 bits (408), Expect = 5.300e-44
Identity = 80/125 (64.00%), Postives = 96/125 (76.80%), Query Frame = 0
Query:   68 LFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVFSPQSNV--LLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGANEAAVRCI 190
            LFATG QDGHVRVWD+R +RAVANVA HV   GAGAVGD+     ++   ++++GAD  VCV+D RRGF VR   +EH+D++YSL V G + LSGAGDGTL AHD+  G PLWALGANEAAVRCI
Sbjct:  340 LFATGAQDGHVRVWDLRARRAVANVAVHVTEAGAGAVGDIGVCTATSPFDVVTSGADQRVCVLDSRRGFSVRWSMDEHRDYVYSLAVGGRIALSGAGDGTLLAHDVVAGRPLWALGANEAAVRCI 464          
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: L1IK44_GUITC (CAP-Gly domain-containing protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1IK44_GUITC)

HSP 1 Score: 152 bits (385), Expect = 1.160e-40
Identity = 92/199 (46.23%), Postives = 116/199 (58.29%), Query Frame = 0
Query:    1 LVSGGRDGVAIAWDVRVGKRVGRMAGHKGHVTAVTALGTPLPSTLAAAASADPSSPAGAMRLREDAVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVF---SPQ--SNVLLSAGADAAVCVMDPRRGFQVRHRFEEHK----DFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGANEAAVRCI 190
            LVSG RDGVA+ WDV   K   R+ GH GH+T++  L                           D   F  G QDG V+VWDVR +R +  +AAHV  +G+GAVG++V    SP   +  +++AGAD  V V+D R GFQ R  F EHK    DFIYSL +AG+++LSGAGDG L AHD+  G   W LGAN+AAVRCI
Sbjct:  292 LVSGDRDGVAMLWDVEANKSR-RIPGHGGHITSLAWL---------------------------DGNTFLVGAQDGKVKVWDVREERFIHQIAAHVTQQGSGAVGNIVVRRTSPNMATTDVVTAGADCRVQVLDARSGFQPRFTFTEHKFNLEDFIYSLAMAGSIILSGAGDGMLLAHDVETGAVCWGLGANKAAVRCI 462          
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A7S3ZD98_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZD98_9EUKA)

HSP 1 Score: 134 bits (336), Expect = 3.100e-33
Identity = 63/126 (50.00%), Postives = 82/126 (65.08%), Query Frame = 0
Query:   65 DAVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVFSPQSNVLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGANEAAVRCI 190
            +A +F TG QDGHVRVWD+R KR +AN+  HV   G GAV  L  S     + SAGAD  +C+MD R+GFQ+RHR  EH+DFIYS++     V+SG GDG+L+ H +     LW +   + AVRCI
Sbjct:  422 EASIFLTGAQDGHVRVWDLRAKREIANIPCHVNKNGTGAVAGLEVSSDLRTVASAGADRTICMMDARKGFQIRHRACEHRDFIYSVKAVDNYVVSGGGDGSLYCHSMTEDRVLWGVKPLQNAVRCI 547          
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A2R6XUS1_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XUS1_MARPO)

HSP 1 Score: 128 bits (321), Expect = 5.050e-31
Identity = 82/197 (41.62%), Postives = 110/197 (55.84%), Query Frame = 0
Query:    1 LVSGGRDGVAIAWDVRVGKRVGRMAG-HKGHVTAVTALGTPLPSTLAAAASADPSSPAGAMRLRED-AVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVFSP----QSNVLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGA-NEAAVRCI 190
            L+SG RDG   +WD   G+ V R    H+GHVTAV  L       + +    +P+  AGA         +F TGGQDG ++VWD+RNK  V   A      G GAV ++ F+        ++++A AD  +  ++PR  F+  H F EHKDFIYSL + G ++ SGAGDG L  HDL  G  L+ LGA N+ AVRCI
Sbjct:  403 LMSGSRDGEVFSWDATTGRAVLRCKNAHQGHVTAVECL-----RDVDSGKPDEPAETAGASLFSGCLGEIFVTGGQDGIIQVWDIRNKAPVHTFAVSRSEHGRGAVSNIGFTNIGARTPPLMITACADKIIRALEPRSSFRTVHTFAEHKDFIYSLHLCGPLMWSGAGDGKLLVHDLTNGRCLYGLGATNDGAVRCI 594          
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A1Y1I2U3_KLENI (F-box and WD-40 domain protein 7 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I2U3_KLENI)

HSP 1 Score: 124 bits (312), Expect = 9.540e-30
Identity = 79/192 (41.15%), Postives = 102/192 (53.12%), Query Frame = 0
Query:    1 LVSGGRDGVAIAWDVRVGKRVGRMA-GHKGHVTAVTALGTPLPSTLAAAASADPSSPAGAMRLREDAVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVFSPQSNVLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGA-NEAAVRCI 190
            +VSG RDG  I WD+       ++   H GHVTA+                   S   G+ +  E   LF TGGQDG +R WD R  RAVA V  HV   G GAV  +  +  ++V+++AGAD  V V+DPR  F+VR+       F+YSL VAG    SG GDG++  HD+  G  L+ LGA N  AVRCI
Sbjct:  447 VVSGARDGCVILWDIGAAASSRQLKRAHVGHVTALVW-----------------SDAGGSPQSEERTNLFLTGGQDGFLRAWDGRTDRAVAEVPVHVAASGTGAVSSIRVA--ADVIVTAGADGMVRVLDPRASFRVRNSLTGPGGFLYSLHVAGRTAFSGGGDGSVLVHDILDGRTLYGLGAINNGAVRCI 619          
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A388K4M7_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K4M7_CHABU)

HSP 1 Score: 120 bits (301), Expect = 3.420e-28
Identity = 75/194 (38.66%), Postives = 101/194 (52.06%), Query Frame = 0
Query:    1 LVSGGRDGVAIAWDVRVGKRVGRMAG-HKGHVTAVTALGTPLPSTLAAAASADPSSPAGAMRLREDAVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVFSPQSN--VLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGAN-EAAVRCI 190
            + SG RDG  + WD   G  +  + G HKGH+T++  +    P         D S             +F +GGQDG +RVWD+R K  V  V  H    G GA+  +  S  +   +L++AGAD  V V++PR  F+  H F EH+DFIYSL     +  SGAGDG L  HD++ G  L+ LGA    AVRCI
Sbjct:  493 MASGSRDGSLVIWDGAKGSAIWNITGAHKGHLTSLLWV-EEKPKAAVGPGETDTSQEEDGDGSGRLPCVFISGGQDGMLRVWDIREKLCVNEVPIHRTPTGTGAISCMAVSKTAAGPLLVTAGADRKVKVLEPRASFKTLHSFGEHRDFIYSLHTRNGLAFSGAGDGNLIVHDVSAGCMLYGLGATANGAVRCI 685          
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A0M0JZ73_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JZ73_9EUKA)

HSP 1 Score: 119 bits (299), Expect = 4.720e-28
Identity = 76/199 (38.19%), Postives = 104/199 (52.26%), Query Frame = 0
Query:    1 LVSGGRDGVAIAWDVRVGKRVGRMAGHKGHVTAVTALGTPLPSTLAAAASADPSSPAGAMRLREDAVL---FATGGQDGHVRVWDVR---NKRAVANVAAHVGLEGAGAVGDLVFSPQSN---VLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGANEAAVRCI 190
            L S  RDG  ++WDV  G     +  H GH TA           LAAA+ A+    A  +      +L     +GGQDG VR+WD+R   + +A      H G     AV DL+     N   +++S+GAD  +  +DPR   Q  H FE+H+DFIYSL   G + +SGAGDG++  HDL  G  ++ LGAN AAVR +
Sbjct:  274 LASADRDGAVVSWDVTTGDAT-HLGAHGGHATA-----------LAAASYAEAGGGAAGVDGESGGLLPRGLVSGGQDGVVRLWDLRMTGSGKAAMETRVHTG-----AVNDLIAHKMPNGQPLVISSGADKRLLTLDPRMSLQAVHLFEDHRDFIYSLHAIGHIAISGAGDGSVLLHDLQQGKCMYGLGANRAAVRAL 455          
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A0A833SLA3_PHYIN (WD domain G-beta repeat n=3 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SLA3_PHYIN)

HSP 1 Score: 114 bits (284), Expect = 3.410e-26
Identity = 78/193 (40.41%), Postives = 102/193 (52.85%), Query Frame = 0
Query:    2 VSGGRDGVAIAWDVRVGKRVGRMAG-HKGHVTAVTALGTPLPSTLAAAASADPSSPAGAMRLREDAVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGA--GAVGDLVFSPQS-NVLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGANEAAVRCI 190
            V G RDG     D++  K + + A  H+GH T+V  LG+                     +  E A  F +GGQDG VRVWD R K A  ++  H+    +  GAVG L    +  NVL++AGAD  + V+D R+ + V + F EH DFIYSL V   +  SGAG+G L  HD   G  L+ LGANEAAVR I
Sbjct:  306 VCGDRDGGVQLIDLQTSKILRKHASAHRGHTTSV--LGS---------------------QSEETASCFFSGGQDGAVRVWDSRQKEATHSLELHIDPRSSKKGAVGFLCEPKEDPNVLITAGADGVINVLDKRQSYDVMYSFTEHLDFIYSLHVRSQLCFSGAGNGMLHVHDWKTGKLLYGLGANEAAVRAI 475          
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Match: A9U3F5_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9U3F5_PHYPA)

HSP 1 Score: 113 bits (283), Expect = 8.880e-26
Identity = 75/196 (38.27%), Postives = 102/196 (52.04%), Query Frame = 0
Query:    1 LVSGGRDGVAIAWDVRVGKRVGRMAG-HKGHVTAVTALGTPLPSTLAAAASADPSSPAGAMRLREDAVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEGAGAVGDLVFS----PQSNVLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSLQVAGAVVLSGAGDGTLFAHDLNLGTPLWALGAN-EAAVRCI 190
            +VSG RDG  I WD      +  ++  HKGHVTAV  L      T                   E   ++ TGGQDG +R WD R +  V +   H      GAV  +  S        ++++AGAD ++ V++PR GF+  H    H+DFIYSL VAG +V SG+GDG+L  H+L  G  L+ LGA+ + AVRCI
Sbjct:  466 IVSGSRDGDVILWDTAHATPLLHVSSAHKGHVTAVECLEDTKNKT-----------------WEECREMYLTGGQDGILRAWDFRTRGPVHSAVLHRNAVTKGAVNSIAVSYTACGSGPIVVTAGADNSMKVLEPRMGFKALHTICTHRDFIYSLYVAGPLVWSGSGDGSLLVHELLTGQCLYGLGADSKGAVRCI 644          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114201.2959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CZ36_CAFRO2.720e-4564.00Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8DFF4_CAFRO5.300e-4464.00Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
L1IK44_GUITC1.160e-4046.23CAP-Gly domain-containing protein n=3 Tax=Guillard... [more]
A0A7S3ZD98_9EUKA3.100e-3350.00Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A2R6XUS1_MARPO5.050e-3141.62Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A1Y1I2U3_KLENI9.540e-3041.15F-box and WD-40 domain protein 7 n=1 Tax=Klebsormi... [more]
A0A388K4M7_CHABU3.420e-2838.66Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A0M0JZ73_9EUKA4.720e-2838.19Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A833SLA3_PHYIN3.410e-2640.41WD domain G-beta repeat n=3 Tax=Phytophthora infes... [more]
A9U3F5_PHYPA8.880e-2638.27Predicted protein n=2 Tax=Physcomitrium patens Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 85..129
e-value: 1.1
score: 16.7
coord: 133..170
e-value: 1.7
score: 15.6
coord: 17..82
e-value: 0.36
score: 19.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 25..82
e-value: 3.0E-4
score: 21.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..23
score: 9.172
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 59..91
score: 10.742
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 55..190
e-value: 5.0E-23
score: 83.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..54
e-value: 2.0E-5
score: 25.4
NoneNo IPR availablePANTHERPTHR44019:SF14coord: 2..190
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 2..190
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 1..15
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..190
score: 15.32
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114201contigM-pyrifera_M_contig114201:3..572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114201.2959.1mRNA_M-pyrifera_M_contig114201.2959.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114201 3..572 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114201.2959.1 ID=prot_M-pyrifera_M_contig114201.2959.1|Name=mRNA_M-pyrifera_M_contig114201.2959.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=190bp
LVSGGRDGVAIAWDVRVGKRVGRMAGHKGHVTAVTALGTPLPSTLAAAAS
ADPSSPAGAMRLREDAVLFATGGQDGHVRVWDVRNKRAVANVAAHVGLEG
AGAVGDLVFSPQSNVLLSAGADAAVCVMDPRRGFQVRHRFEEHKDFIYSL
QVAGAVVLSGAGDGTLFAHDLNLGTPLWALGANEAAVRCI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf