prot_M-pyrifera_M_contig114092.2935.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114092.2935.1
Unique Nameprot_M-pyrifera_M_contig114092.2935.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length90
Homology
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BLAST of mRNA_M-pyrifera_M_contig114092.2935.1 vs. uniprot
Match: A0A6H5L4M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M7_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 4.860e-20
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0 
Query:   13 PSCDEDECPHTNSSGFRGRVCDPSCADGIPYGTNGCGAREGRHGPNCRVCYNDVDRAVANDDPANRSIMCDTLLPVE 89
            P C    C +T+  G +GRVCD +C+    YGT GCGA++G +G +CRVCYN+VDRA+  D P NR+IMC T++PV+
Sbjct:  419 PGCSS-RCTYTSKDGTKGRVCDSNCSTPNVYGTKGCGAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTMMPVD 494
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BLAST of mRNA_M-pyrifera_M_contig114092.2935.1 vs. uniprot
Match: D7FI39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.110e-18
Identity = 39/77 (50.65%), Postives = 53/77 (68.83%), Query Frame = 0 
Query:   13 PSCDEDECPHTNSSGFRGRVCDPSCADGIPYGTNGCGAREGRHGPNCRVCYNDVDRAVANDDPANRSIMCDTLLPVE 89
            P C    C +T+  G +GRVCD +C+    YGT GC A++G +G +CRVCYN+VDRA+  D P NR+IMC T+ PV+
Sbjct:  563 PGCSS-RCTYTSKDGTKGRVCDSNCSSPNVYGTKGCNAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTVKPVD 638
[Close]
BLAST of mRNA_M-pyrifera_M_contig114092.2935.1 vs. uniprot
Match: A0A6H5JGJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ2_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 4.640e-12
Identity = 35/77 (45.45%), Postives = 44/77 (57.14%), Query Frame = 0 
Query:   13 PSCDEDECPHTNSSGFRGRVCDPSCADGIPYGTNGCGAREGRHGPNCRVCYNDVDRAVANDDPANRSIMCDTLLPVE 89
            PS   D C +T++ G  G            YG  GC   +G++G NCR C+NDVD A+  D   NRSIMCDTLLPV+
Sbjct:  316 PSDCNDSCEYTSNDGTTGXXXXXXXXXXXXYGFFGCDTNDGQYGGNCRYCFNDVDSALEFDAQDNRSIMCDTLLPVD 392
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114092.2935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L4M7_9PHAE4.860e-2051.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI39_ECTSI1.110e-1850.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGJ2_9PHAE4.640e-1245.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114092contigM-pyrifera_M_contig114092:19..537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114092.2935.1mRNA_M-pyrifera_M_contig114092.2935.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114092 19..537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114092.2935.1 ID=prot_M-pyrifera_M_contig114092.2935.1|Name=mRNA_M-pyrifera_M_contig114092.2935.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp
CDTLLPVETVEPPSCDEDECPHTNSSGFRGRVCDPSCADGIPYGTNGCGA
REGRHGPNCRVCYNDVDRAVANDDPANRSIMCDTLLPVET
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