prot_M-pyrifera_M_contig113821.2865.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113821.2865.1
Unique Nameprot_M-pyrifera_M_contig113821.2865.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length126
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113821.2865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 59..126
e-value: 5.3E-8
score: 35.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..126
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 62..82
e-value: 0.0076
score: 15.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 54..89
score: 7.121
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 101..126
score: 8.488
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 114..126
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 67..79
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 55..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113821contigM-pyrifera_M_contig113821:18..395 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113821.2865.1mRNA_M-pyrifera_M_contig113821.2865.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113821 18..395 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113821.2865.1 ID=prot_M-pyrifera_M_contig113821.2865.1|Name=mRNA_M-pyrifera_M_contig113821.2865.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp
MTKNSYVRTTLAAAVSATLMAGAANAELARDTREASAGGHADNVTKHSAL
PVTRHQRAVLDSFINADDNADGMLSVEEYRELALQRLARTGAEPRDKLTA
AEMLDVDAEFMVADRDPDGQLSFHEI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair