mRNA_M-pyrifera_M_contig113272.2773.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113272.2773.1 vs. uniprot
Match: A0A7X5WQ15_9ACTN (Amidase domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WQ15_9ACTN) HSP 1 Score: 238 bits (607), Expect = 5.100e-74 Identity = 131/193 (67.88%), Postives = 149/193 (77.20%), Query Frame = 1
Query: 1 LTTVGPMARRIRDVALALDVVAGPTPGDLRSLDAPARSYREALAEPHAPTRVLWAPSIEGQAPDAEIHAVCRAAVDRIADAGVEVVEIGPVLEG--VIGPFAMLFFGGMVPSYREVMADPDLFAQVTPELQDMLTYAAGILTPDAVEEARMTAQAMSLSLAEAMEGFDVLLSPTVAGQTPVSERSGTIDGHET 573
L+TVGPMARRIRDVALALDVVAGP PGDLRSLD S+R AL +P AP+RVLWAPSI+G APD EI AVCRAAVDRI AGV+VVE GP+ E V+ F LFFGGMVP+YREVMAD FAQVTP L+ +L AA + DA+++AR+TAQ +SL LAEAM GFD +LSPTVAGQT S GTIDG T
Sbjct: 140 LSTVGPMARRIRDVALALDVVAGPAPGDLRSLDPAPSSFRAALDDPPAPSRVLWAPSIQGTAPDTEILAVCRAAVDRIEAAGVDVVECGPLFEAGDVVSAFVKLFFGGMVPAYREVMADESAFAQVTPFLRTVLEAAAERVDADALDDARVTAQRLSLGLAEAMAGFDAVLSPTVAGQTGRSMEEGTIDGEPT 332
BLAST of mRNA_M-pyrifera_M_contig113272.2773.1 vs. uniprot
Match: A0A2D6U734_9ACTN (Amidase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U734_9ACTN) HSP 1 Score: 218 bits (555), Expect = 7.380e-66 Identity = 117/190 (61.58%), Postives = 137/190 (72.11%), Query Frame = 1
Query: 1 LTTVGPMARRIRDVALALDVVAGPTPGDLRSLDAPARSYREALAEPHAPTRVLWAPSIEGQAPDAEIHAVCRAAVDRIADAGVEVVEIGPVLEGVIGPFAMLFFGGMVPSYREVMADPDLFAQVTPELQDMLTYAAGILTPDAVEEARMTAQAMSLSLAEAMEGFDVLLSPTVAGQTPVSERSGTIDGHE 570
L+TVGPMARRIRDVALALDVV GP P DLRSL P S+R P P RVLW PSIEG DAE+ AV AVDRI GVEVVE P++ V F +LF+GGMVP YR+V+ D FA VTP LQ++LT A G+L+P+++EEAR TAQ S++LAEAMEGFD LLSPT GQTP SER G ++G E
Sbjct: 215 LSTVGPMARRIRDVALALDVVVGPDPNDLRSLPHPGASFRSXXDXPRPPARVLWCPSIEGSELDAEVLAVTTEAVDRIRSXGVEVVEAAPIVPEVFSAFLLLFYGGMVPGYRDVI-DGAAFAGVTPRLQEILTMADGLLSPESIEEARKTAQRSSIALAEAMEGFDCLLSPTTVGQTPRSERGGLVNGQE 403
BLAST of mRNA_M-pyrifera_M_contig113272.2773.1 vs. uniprot
Match: A0A3M2G6G0_ACTSX (Amidase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2G6G0_ACTSX) HSP 1 Score: 205 bits (522), Expect = 1.300e-60 Identity = 116/191 (60.73%), Postives = 141/191 (73.82%), Query Frame = 1
Query: 1 LTTVGPMARRIRDVALALDVVAGPTPGDLRSLDAPARSYREALAEPHAPTRVLWAPSIEGQAPDAEIHAVCRAAVDRIADAGVEVVEIGPVLEGVIGPFAMLFFGGMVPSYREVMADPDLFAQVTPELQDMLTYAAGILTPDAVEEARMTAQAMSLSLAEAMEGFDVLLSPTVAGQTPVSERSGTIDGHET 573
L+ VGPMARRIRDVALALDVV GP PGDLRS+ AP +R AL +P P RVLWAPS++G A DAE+ AV AAV+R+ADAGV+VVE G V+E IGPFA+LFFG MVPS+R + P +A+VTP L +L A +T + EAR+ AQA+S+ + EA+ GFD LL+PTVAGQTP S GTIDG ET
Sbjct: 249 LSCVGPMARRIRDVALALDVVVGPHPGDLRSMPAPPAPWRPALDDPEPPRRVLWAPSLDGLAVDAEVAAVTAAAVERLADAGVDVVETGAVIEHPIGPFALLFFGMMVPSHRPLYGTP-AWAEVTPGLAAILEGAFERVTVASQAEARVAAQALSVRVHEALAGFDALLTPTVAGQTPRSGAPGTIDGVET 438
BLAST of mRNA_M-pyrifera_M_contig113272.2773.1 vs. uniprot
Match: A0A358A449_9ACTN (Amidase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A449_9ACTN) HSP 1 Score: 188 bits (478), Expect = 2.110e-54 Identity = 110/191 (57.59%), Postives = 131/191 (68.59%), Query Frame = 1
Query: 1 LTTVGPMARRIRDVALALDVVAGPTPGDLRSLDAPARSYREALAEPHAPTRVLWAPSIEGQAP-DAEIHAVCRAAVDRIADAGVEVVEIGPVLEGVIGPFAMLFFGGMVPSYREVMADPDLFAQVTPELQDMLTYAAGILTPDAVEEARMTAQAMSLSLAEAMEGFDVLLSPTVAGQTPVSERSGTIDGHE 570
L+TVGPMARRIRDVALALDVV GP+ DLRSL P S+R P AP R+L+ S + + D EI A AVD I AGVEVVE+ VL PF +LFFGGMVP+YR +M D F VTP+LQ +L A LTPD++EEAR AQA S+ LAEAM GFD L++PTV GQTPVS+R G I+G+E
Sbjct: 215 LSTVGPMARRIRDVALALDVVVGPSADDLRSLPHPRASFRAVCDAPQAPRRLLYCASTDDTSTVDDEIAARTAEAVDTIRAAGVEVVEVDGVLPDAFSPFLLLFFGGMVPAYRHLMGT-DAFDAVTPDLQRILLMADERLTPDSIEEARKDAQANSVMLAEAMVGFDALITPTVIGQTPVSQRGGVINGNE 404
BLAST of mRNA_M-pyrifera_M_contig113272.2773.1 vs. uniprot
Match: A0A7K1ZEZ8_9ACTN (Amidase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZEZ8_9ACTN) HSP 1 Score: 180 bits (457), Expect = 7.990e-51 Identity = 104/191 (54.45%), Postives = 127/191 (66.49%), Query Frame = 1
Query: 1 LTTVGPMARRIRDVALALDVVAGPTPGDLRSLDAPARSYREALAEPHAPTRVLWAPSIEGQAPDAEIHAVCRAAVDRIADAGVEVVEIGPVLEGVIGPFAMLFFGGMVPSYREVMADPDLFAQVTPELQDMLTYAAGILTPDAVEEARMTAQAMSLSLAEAMEGFDVLLSPTVAGQTPVSERSGTIDGHET 573
L+TVGPMARRIRDVA LDVV L +P AP RVLW P+IEG D EI A C +AV+++ AGVEVV+I PV+ +IGPF +LF+GGMVP+YRE+ P + ++TP L+D+L A LTPDA+E+AR AQA S+ LAEAM GFD LLSPTV GQTPV E G I+G ET
Sbjct: 275 LSTVGPMARRIRDVAYVLDVVXXXXXXXXXXXXXXXXXXPR-LDDPPAPARVLWCPNIEGSPVDDEILASCLSAVEQMRRAGVEVVDIEPVMPEIIGPFVLLFYGGMVPTYRELFGTP-AWDEITPGLRDILEGADERLTPDAIEDARKQAQAASIRLAEAMSGFDALLSPTVVGQTPVCEGPGIINGEET 463
BLAST of mRNA_M-pyrifera_M_contig113272.2773.1 vs. uniprot
Match: A0A6B1H2X9_9ACTN (Amidase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1H2X9_9ACTN) HSP 1 Score: 171 bits (433), Expect = 9.680e-48 Identity = 97/191 (50.79%), Postives = 124/191 (64.92%), Query Frame = 1
Query: 1 LTTVGPMARRIRDVALALDVVAGPTPGDLRSLDAPARSYREALAEPHAPTRVLWAPSIEGQAPDAEIHAVCRAAVDRIADAGVEVVEIGPVLEGVIGPFAMLFFGGMV-PSYREVMADPDLFAQVTPELQDMLTYAAGILTPDAVEEARMTAQAMSLSLAEAMEGFDVLLSPTVAGQTPVSERSGTIDGHE 570
L+ VGPMARR+RDVA LD V GP P DLRSL AP S+R AL P P RVLWAP+ +G+ D+EI A C AAV+R++ GVEVVE G +LE + G F LFFGG++ P+YR + P + VT L L +T +A+ +AR A +S+ L EAM GFD +L PT+AGQTP +GTI+G E
Sbjct: 214 LSCVGPMARRVRDVAYCLDAVVGPHPSDLRSLPAPTESWRRALDNPPMPERVLWAPAFDGEPVDSEIVASCAAAVERLSAEGVEVVEAGAILEPISGAFVPLFFGGLIGPTYRPLFGTP-AWDDVTDVLAAALEETYEQVTVEALSQARQQAGELSMRLGEAMAGFDAMLLPTMAGQTPTVGGNGTINGVE 403
BLAST of mRNA_M-pyrifera_M_contig113272.2773.1 vs. uniprot
Match: A0A7K2E870_9ACTN (Amidase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E870_9ACTN) HSP 1 Score: 169 bits (427), Expect = 6.960e-47 Identity = 99/192 (51.56%), Postives = 123/192 (64.06%), Query Frame = 1
Query: 1 LTTVGPMARRIRDVALALDVVAGPTPGDLRSLDAPARSYREALAEPHAPTRVLWAPSIEGQAPDAEIHAVCRAAVDRIADAGVEVVEIGPVLEGVIGPFAMLFFGGMV-PSYREVMADPDLFAQVTPELQDMLTYAAGILTPDAVEEARMTAQAMSLSLAEAMEGFDVLLSPTVAGQTPVSERSGTIDGHET 573
L+ VGPMAR IRDVAL LD + GP P DLRSL P S+R AL P PTRVLWAPSI+G+ DAEI A C AVD +A GVEVVE+G + V G F LF GG++ P++R + D +A VT L ML TP+++ AR A +S++LA+ MEG+D LL PT+AGQ P GTI+G ET
Sbjct: 214 LSCVGPMARLIRDVALCLDTMVGPHPADLRSLPKPDVSWRAALDSPRVPTRVLWAPSIDGEPVDAEIAAACTEAVDGLAAEGVEVVEVGGAITAVPGAFLQLFLGGLIGPAFRPLYGT-DEWANVTEVLGVMLEDVYQRATPESIYWARQQAGELSIALADLMEGYDALLMPTLAGQAPPPGGHGTINGEET 404
BLAST of mRNA_M-pyrifera_M_contig113272.2773.1 vs. uniprot
Match: A0A6G2JBW7_9ACTN (Amidase n=5 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A6G2JBW7_9ACTN) HSP 1 Score: 161 bits (408), Expect = 4.960e-44 Identity = 98/194 (50.52%), Postives = 120/194 (61.86%), Query Frame = 1
Query: 1 LTTVGPMARRIRDVALALDVVAGPTPGDLRSLDAPARSYREALAEPHAPTRVLWAPSIEGQAPDAEIHAVCRAAVDRIADAGVEVVEIGPVLE--GVIGP-FAMLFFGGMV-PSYREVMADPDLFAQVTPELQDMLTYAAGILTPDAVEEARMTAQAMSLSLAEAMEGFDVLLSPTVAGQTPVSERSGTIDGHE 570
L+ VGPMARRIRDVA LD + GP P DLRSL AP S+R AL +P P RVLW PS +G D+EI A C AAV+R+A G EVVE GP+ E G++ F LF GG++ P++R + D + VT L L A +T D V AR +S+ L EAM GFD +L PT+AGQTPV GTIDG E
Sbjct: 221 LSCVGPMARRIRDVAYCLDAIIGPHPSDLRSLPAPTESWRAALDDPPLPARVLWVPSFDGGPVDSEIMASCTAAVERLAAEGTEVVEAGPLFEPAGIVTEAFLPLFLGGLIAPAFRPLFGT-DAWDDVTDWLAVALAEAFERITVDTVSAARQQCGELSVQLGEAMSGFDAMLLPTMAGQTPVVGGDGTIDGVE 413
BLAST of mRNA_M-pyrifera_M_contig113272.2773.1 vs. uniprot
Match: A0A6B0ZMA4_9ACTN (Amidase domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZMA4_9ACTN) HSP 1 Score: 119 bits (298), Expect = 3.370e-30 Identity = 71/150 (47.33%), Postives = 92/150 (61.33%), Query Frame = 1
Query: 127 LAEPHAPTRVLWAPSIEGQAPDAEIHAVCRAAVDRIADAGVEVVEIGPVLEGVIGPFAMLFFGGMV-PSYREVMADPDLFAQVTPELQDMLTYAAGILTPDAVEEARMTAQAMSLSLAEAMEGFDVLLSPTVAGQTPVSERSGTIDGHET 573
L P P RVLWAPSI+G D+EI + C AAV R+A GVEVVE + V G F LFFGG++ P++R + D + VT L ML TP+++ EAR A +S++LAE M+G+DVLL PT+AGQ P GTI+G ET
Sbjct: 1 LDSPRVPARVLWAPSIDGGPVDSEIASACAAAVGRLAAEGVEVVEAQTEISAVPGAFLQLFFGGLIGPAFRPLYGT-DEWDNVTDVLAVMLEDVYRRATPESIYEARQQAGELSIALAEMMDGYDVLLMPTLAGQAPAPAGHGTINGTET 149
BLAST of mRNA_M-pyrifera_M_contig113272.2773.1 vs. uniprot
Match: A0A8F4J9B4_9ACTN (Amidase domain-containing protein n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4J9B4_9ACTN) HSP 1 Score: 119 bits (299), Expect = 2.330e-28 Identity = 77/193 (39.90%), Postives = 105/193 (54.40%), Query Frame = 1
Query: 1 LTTVGPMARRIRDVALALDVVAGPTPGDLRSLDAPARSYREALAEPHAPTRVLWAPSIEGQAPDAEIHAVCRAAVDRIADAGVEVVEIGPVLEGVIGPFAMLFFGGMVPSYREVM-ADPD--LFAQVTPELQDMLTYAAGILTPDAVEEARMTAQAMSLSLAEAMEGFDVLLSPTVAGQTPVSERSGTIDGHE 570
L++ G M R IRD ALALD V GP P DLR+L P S+ +A+ + H P RVLW+P++ DAE+ +C AV + G EVV + V + P + + R + ADPD + Q+ P+L MLT+A T EA A ++ L E + +LL+PTVAGQTPV SGT+DG E
Sbjct: 212 LSSKGLMTRTIRDQALALDSVIGPEPTDLRALPMPEDSWIDAVGDVHLPRRVLWSPTLGYATVDAEVLDICEGAVRALEARGTEVVRVDDVFDE--DPGVQWLMLSLTANLRTIQGADPDGGRWDQLDPDLAGMLTWAQSTATATTALEAMDLAHRLNARLVEVLHQAPLLLTPTVAGQTPVGSASGTVDGVE 402 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113272.2773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113272.2773.1 >prot_M-pyrifera_M_contig113272.2773.1 ID=prot_M-pyrifera_M_contig113272.2773.1|Name=mRNA_M-pyrifera_M_contig113272.2773.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp MARRIRDVALALDVVAGPTPGDLRSLDAPARSYREALAEPHAPTRVLWAPback to top mRNA from alignment at M-pyrifera_M_contig113272:6..578- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113272.2773.1 ID=mRNA_M-pyrifera_M_contig113272.2773.1|Name=mRNA_M-pyrifera_M_contig113272.2773.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=573bp|location=Sequence derived from alignment at M-pyrifera_M_contig113272:6..578- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113272:6..578- >mRNA_M-pyrifera_M_contig113272.2773.1 ID=mRNA_M-pyrifera_M_contig113272.2773.1|Name=mRNA_M-pyrifera_M_contig113272.2773.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig113272:6..578- (Macrocystis pyrifera P11B4 male)back to top |