mRNA_M-pyrifera_M_contig113224.2757.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113224.2757.1 vs. uniprot
Match: A0A2H8TNW2_9HEMI (Tyrosine--tRNA ligase n=1 Tax=Melanaphis sacchari TaxID=742174 RepID=A0A2H8TNW2_9HEMI) HSP 1 Score: 239 bits (610), Expect = 9.640e-79 Identity = 115/150 (76.67%), Postives = 129/150 (86.00%), Query Frame = 1
Query: 1 DAYGANSIDTILAERPLKVYWGTATTGRPHIAYFVPISKLADFLKAGCAVTVLFADLHAYLDNQKAPWEVLNYRVQYYEYVIKGMLKSIGVPLDNLKFVRGTDYQLSKEYTLDVYRISSSSTLRDCKKAGAEVVKQVQSPLLSGLLYPCL 450
+ G + +D IL ER LK+YWGTATTGRPHIAYFVPISK+AD+LKAGC VT+LFADLHAYLDN KAPWE+L RVQYYE+ IK ML SIGVPLD LKFVRGT+YQLSKEYT+D+YR+SSS T D KKAGAEVVKQV +PLLSGLLYP L
Sbjct: 17 EVLGEDKLDVILKERDLKIYWGTATTGRPHIAYFVPISKIADYLKAGCEVTILFADLHAYLDNMKAPWELLELRVQYYEHSIKAMLTSIGVPLDKLKFVRGTEYQLSKEYTMDMYRLSSSITEHDAKKAGAEVVKQVDNPLLSGLLYPGL 166
BLAST of mRNA_M-pyrifera_M_contig113224.2757.1 vs. uniprot
Match: A0A482WMR8_LAOST (Tyrosine--tRNA ligase (Fragment) n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482WMR8_LAOST) HSP 1 Score: 237 bits (604), Expect = 4.450e-77 Identity = 115/151 (76.16%), Postives = 128/151 (84.77%), Query Frame = 1
Query: 1 DAYGANSIDTILAERPLKVYWGTATTGRPHIAYFVPISKLADFLKAGCAVTVLFADLHAYLDNQKAPWEVLNYRVQYYEYVIKGMLKSIGVPLDNLKFVRGTDYQLSKEYTLDVYRISSSSTLRDCKKAGAEVVKQVQSPLLSGLLYPCLQ 453
+ G + + IL ER LK+YWGTATTGRPHIAYFVP+SK+ DFL+AGC VT+LFADLHAYLDN KAPWE+L R QYYE+VIK ML+SIGVPLD LKFVRGTDYQLSKEYTLDVYR+SS T D KKAGAEVVKQV+ PLLSGLLYP LQ
Sbjct: 25 EVLGEDRMTAILKERDLKIYWGTATTGRPHIAYFVPMSKIGDFLRAGCEVTILFADLHAYLDNMKAPWELLALRTQYYEHVIKAMLQSIGVPLDKLKFVRGTDYQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQ 175
BLAST of mRNA_M-pyrifera_M_contig113224.2757.1 vs. uniprot
Match: A0A8C1BFA2_CYPCA (Tyrosine--tRNA ligase n=2 Tax=Clupeocephala TaxID=186625 RepID=A0A8C1BFA2_CYPCA) HSP 1 Score: 237 bits (605), Expect = 8.870e-77 Identity = 115/151 (76.16%), Postives = 128/151 (84.77%), Query Frame = 1
Query: 1 DAYGANSIDTILAERPLKVYWGTATTGRPHIAYFVPISKLADFLKAGCAVTVLFADLHAYLDNQKAPWEVLNYRVQYYEYVIKGMLKSIGVPLDNLKFVRGTDYQLSKEYTLDVYRISSSSTLRDCKKAGAEVVKQVQSPLLSGLLYPCLQ 453
+ G + IL ER LKVYWGTATTG+PH+AYFVP+SK+ADFLKAGC VT+LFADLHAYLDN KAPWE+L RVQYYE VIK ML+SIGVPLD LKFV+GTDYQLS+EYTLDVYR+SS T D KKAGAEVVKQV+ PLLSGLLYP LQ
Sbjct: 20 EVLGEERLKEILKERELKVYWGTATTGKPHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMKAPWELLELRVQYYEQVIKAMLESIGVPLDKLKFVKGTDYQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPLLSGLLYPGLQ 170
BLAST of mRNA_M-pyrifera_M_contig113224.2757.1 vs. uniprot
Match: B5XCP6_SALSA (Tyrosine--tRNA ligase n=2 Tax=Salmoninae TaxID=504568 RepID=B5XCP6_SALSA) HSP 1 Score: 236 bits (601), Expect = 2.290e-76 Identity = 113/151 (74.83%), Postives = 128/151 (84.77%), Query Frame = 1
Query: 1 DAYGANSIDTILAERPLKVYWGTATTGRPHIAYFVPISKLADFLKAGCAVTVLFADLHAYLDNQKAPWEVLNYRVQYYEYVIKGMLKSIGVPLDNLKFVRGTDYQLSKEYTLDVYRISSSSTLRDCKKAGAEVVKQVQSPLLSGLLYPCLQ 453
+ G I +LAER LKVYWGTATTG+PH+AYFVP+SK+ADFLKAGC VT+LFADLHA+LDN KAPWE+L RVQYYE VIK ML+SIGVPLD LKF++GTD+QLS+EYTLDVYR+SS T D KKAGAEVVKQV PLLSGLLYP LQ
Sbjct: 20 EVLGEEKIKQVLAERELKVYWGTATTGKPHVAYFVPMSKIADFLKAGCEVTILFADLHAFLDNMKAPWELLELRVQYYEQVIKAMLESIGVPLDKLKFIKGTDFQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVDHPLLSGLLYPGLQ 170
BLAST of mRNA_M-pyrifera_M_contig113224.2757.1 vs. uniprot
Match: A0A673KHC2_9TELE (Tyrosine--tRNA ligase n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673KHC2_9TELE) HSP 1 Score: 236 bits (601), Expect = 2.780e-76 Identity = 113/151 (74.83%), Postives = 128/151 (84.77%), Query Frame = 1
Query: 1 DAYGANSIDTILAERPLKVYWGTATTGRPHIAYFVPISKLADFLKAGCAVTVLFADLHAYLDNQKAPWEVLNYRVQYYEYVIKGMLKSIGVPLDNLKFVRGTDYQLSKEYTLDVYRISSSSTLRDCKKAGAEVVKQVQSPLLSGLLYPCLQ 453
+ G + IL ER LKVYWGTATTG+PH+AYFVP+SK+ADFLKAGC VT+LFADLHAYLDN KAPWE+L RVQYYE +IK ML+SIGVPLD L+FV+GTDYQLS+EYTLDVYR+SS T D KKAGAEVVKQV+ PLLSGLLYP LQ
Sbjct: 20 EVLGEERLKEILKERELKVYWGTATTGKPHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMKAPWELLELRVQYYEQIIKAMLESIGVPLDKLRFVKGTDYQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPLLSGLLYPGLQ 170
BLAST of mRNA_M-pyrifera_M_contig113224.2757.1 vs. uniprot
Match: A0A4W4G7X9_ELEEL (Tyrosine--tRNA ligase n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4G7X9_ELEEL) HSP 1 Score: 236 bits (601), Expect = 2.870e-76 Identity = 114/151 (75.50%), Postives = 128/151 (84.77%), Query Frame = 1
Query: 1 DAYGANSIDTILAERPLKVYWGTATTGRPHIAYFVPISKLADFLKAGCAVTVLFADLHAYLDNQKAPWEVLNYRVQYYEYVIKGMLKSIGVPLDNLKFVRGTDYQLSKEYTLDVYRISSSSTLRDCKKAGAEVVKQVQSPLLSGLLYPCLQ 453
+ G + IL ER LKVYWGTATTG+PH+AYFVP+SK+ADFLKAGC VT+LFADLHAYLDN KAPWE+L RVQYYE VIK ML+SIGVPLD LKFV+GTD+QLS+EYTLDVYR+SS T D KKAGAEVVKQV+ PLLSGLLYP LQ
Sbjct: 20 EVLGEEKLKQILQERELKVYWGTATTGKPHVAYFVPMSKIADFLKAGCQVTILFADLHAYLDNMKAPWELLELRVQYYEQVIKAMLESIGVPLDRLKFVKGTDFQLSREYTLDVYRLSSIVTEHDAKKAGAEVVKQVEHPLLSGLLYPGLQ 170
BLAST of mRNA_M-pyrifera_M_contig113224.2757.1 vs. uniprot
Match: A0A671U9U5_SPAAU (Tyrosine--tRNA ligase n=2 Tax=Clupeocephala TaxID=186625 RepID=A0A671U9U5_SPAAU) HSP 1 Score: 236 bits (602), Expect = 3.170e-76 Identity = 113/151 (74.83%), Postives = 128/151 (84.77%), Query Frame = 1
Query: 1 DAYGANSIDTILAERPLKVYWGTATTGRPHIAYFVPISKLADFLKAGCAVTVLFADLHAYLDNQKAPWEVLNYRVQYYEYVIKGMLKSIGVPLDNLKFVRGTDYQLSKEYTLDVYRISSSSTLRDCKKAGAEVVKQVQSPLLSGLLYPCLQ 453
+ G + +L ER LKVYWGTATTG+PH+AYFVP+SK+ADFLKAGC VT+LFADLHAYLDN KAPWE+L RV+YYE VIK ML+SIGVPLD LKFV+GTDYQLS+EYTLDVYR+SS T D KKAGAEVVKQV+ PLLSGLLYP LQ
Sbjct: 20 EVLGEEKVKQVLQERELKVYWGTATTGKPHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLDKLKFVKGTDYQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPLLSGLLYPGLQ 170
BLAST of mRNA_M-pyrifera_M_contig113224.2757.1 vs. uniprot
Match: A0A6Q8PF15_HUMAN (Tyrosine--tRNA ligase n=1 Tax=Homo sapiens TaxID=9606 RepID=A0A6Q8PF15_HUMAN) HSP 1 Score: 234 bits (596), Expect = 7.090e-76 Identity = 112/151 (74.17%), Postives = 127/151 (84.11%), Query Frame = 1
Query: 1 DAYGANSIDTILAERPLKVYWGTATTGRPHIAYFVPISKLADFLKAGCAVTVLFADLHAYLDNQKAPWEVLNYRVQYYEYVIKGMLKSIGVPLDNLKFVRGTDYQLSKEYTLDVYRISSSSTLRDCKKAGAEVVKQVQSPLLSGLLYPCLQ 453
+ G + IL ER LK+YWGTATTG+PH+AYFVP+SK+ADFLKAGC VT+LFADLHAYLDN KAPWE+L RV YYE VIK ML+SIGVPL+ LKF++GTDYQLSKEYTLDVYR+SS T D KKAGAEVVKQV+ PLLSGLLYP LQ
Sbjct: 20 EVLGEEKLKEILKERELKIYWGTATTGKPHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTDYQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPLLSGLLYPGLQ 170
BLAST of mRNA_M-pyrifera_M_contig113224.2757.1 vs. uniprot
Match: A0A0C4DGZ5_HUMAN (Tyrosine--tRNA ligase n=1 Tax=Homo sapiens TaxID=9606 RepID=A0A0C4DGZ5_HUMAN) HSP 1 Score: 234 bits (596), Expect = 8.910e-76 Identity = 112/151 (74.17%), Postives = 127/151 (84.11%), Query Frame = 1
Query: 1 DAYGANSIDTILAERPLKVYWGTATTGRPHIAYFVPISKLADFLKAGCAVTVLFADLHAYLDNQKAPWEVLNYRVQYYEYVIKGMLKSIGVPLDNLKFVRGTDYQLSKEYTLDVYRISSSSTLRDCKKAGAEVVKQVQSPLLSGLLYPCLQ 453
+ G + IL ER LK+YWGTATTG+PH+AYFVP+SK+ADFLKAGC VT+LFADLHAYLDN KAPWE+L RV YYE VIK ML+SIGVPL+ LKF++GTDYQLSKEYTLDVYR+SS T D KKAGAEVVKQV+ PLLSGLLYP LQ
Sbjct: 20 EVLGEEKLKEILKERELKIYWGTATTGKPHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTDYQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPLLSGLLYPGLQ 170
BLAST of mRNA_M-pyrifera_M_contig113224.2757.1 vs. uniprot
Match: M3YUT8_MUSPF (Tyrosine--tRNA ligase n=1 Tax=Mustela putorius furo TaxID=9669 RepID=M3YUT8_MUSPF) HSP 1 Score: 233 bits (595), Expect = 1.150e-75 Identity = 113/151 (74.83%), Postives = 126/151 (83.44%), Query Frame = 1
Query: 1 DAYGANSIDTILAERPLKVYWGTATTGRPHIAYFVPISKLADFLKAGCAVTVLFADLHAYLDNQKAPWEVLNYRVQYYEYVIKGMLKSIGVPLDNLKFVRGTDYQLSKEYTLDVYRISSSSTLRDCKKAGAEVVKQVQSPLLSGLLYPCLQ 453
+ G + IL ER LKVYWGTATTG+PH+AYFVP+SK+ADFLKAGC VT+LFADLHAYLDN KAPWE+L R YYE VIK ML+SIGVPL+ LKFV+GTDYQLSKEYTLDVYR+SS T D KKAGAEVVKQV+ PLLSGLLYP LQ
Sbjct: 56 EVLGEEKLKEILKERELKVYWGTATTGKPHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEKLKFVKGTDYQLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPLLSGLLYPGLQ 206 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113224.2757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113224.2757.1 >prot_M-pyrifera_M_contig113224.2757.1 ID=prot_M-pyrifera_M_contig113224.2757.1|Name=mRNA_M-pyrifera_M_contig113224.2757.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp DAYGANSIDTILAERPLKVYWGTATTGRPHIAYFVPISKLADFLKAGCAVback to top mRNA from alignment at M-pyrifera_M_contig113224:112..564- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113224.2757.1 ID=mRNA_M-pyrifera_M_contig113224.2757.1|Name=mRNA_M-pyrifera_M_contig113224.2757.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=453bp|location=Sequence derived from alignment at M-pyrifera_M_contig113224:112..564- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113224:112..564- >mRNA_M-pyrifera_M_contig113224.2757.1 ID=mRNA_M-pyrifera_M_contig113224.2757.1|Name=mRNA_M-pyrifera_M_contig113224.2757.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=906bp|location=Sequence derived from alignment at M-pyrifera_M_contig113224:112..564- (Macrocystis pyrifera P11B4 male)back to top |