mRNA_M-pyrifera_M_contig112910.2684.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: A0A078BAW4_STYLE (Coatomer subunit beta n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078BAW4_STYLE) HSP 1 Score: 71.6 bits (174), Expect = 8.340e-13 Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 1 EVVMTYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEEEEAEEAEK 234
E++ +PEHRQ+I ++ ++ DI+S V+R+ALW++GEY+ + D+D AF TIK VGS+P ++ + + +E K
Sbjct: 442 EIIEVHPEHRQSIFEKICDSFEDIRSHLVIRVALWIIGEYATTQTDVDRAFDTIKKNVGSLPLYKAEANDNQNQEETK 519
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: L8GRY6_ACACA (Coatomer subunit beta n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRY6_ACACA) HSP 1 Score: 71.2 bits (173), Expect = 1.140e-12 Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 1 EVVMTYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEEE 213
EV TYPE R++I R+L +L I +S+V R ALWV+GEY+ + +DID AF+T+KG +G++P + SE+E
Sbjct: 422 EVAETYPELRESILRKLFLSLKHITASSVYRTALWVLGEYALTTDDIDQAFSTLKGEIGALPLVKDGSEDE 492
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: A0A8J8P1P6_HALGN (Coatomer subunit beta n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P1P6_HALGN) HSP 1 Score: 69.3 bits (168), Expect = 5.420e-12 Identity = 33/78 (42.31%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 1 EVVMTYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEE--EEAEEA 228
EV+ + EHRQAI ++ ++ DI++ V+R+ALW++GEY+ S +D+D AF TIK +G++P +E+ EE++EA
Sbjct: 442 EVIEVHQEHRQAIFDKICDSFEDIRAHLVIRVALWILGEYASSQKDVDKAFETIKRNIGALPIFAPATEQTGEESKEA 519
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: J9HVP7_9SPIT (Coatomer subunit beta n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HVP7_9SPIT) HSP 1 Score: 68.6 bits (166), Expect = 1.010e-11 Identity = 29/68 (42.65%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 1 EVVMTYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKS 204
E++ +PEHRQAI ++ + DI+S V+R+ALW++GEY+ S D++ AF TIK +G++P + S
Sbjct: 440 EIIEVHPEHRQAIFDKICDNFEDIRSHLVIRVALWIIGEYATSQRDVERAFDTIKKNIGALPLFSEDS 507
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: I0YWB4_COCSC (Coatomer subunit beta n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YWB4_COCSC) HSP 1 Score: 67.0 bits (162), Expect = 3.520e-11 Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 1
Query: 1 EVVMTYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEEEEAEEAE 231
E++ T P+ R I RL++ I+SS V ALW++ EYS S+EDI A I+ +GS+PF+ K E+++AEE E
Sbjct: 423 EIMETNPKLRPTILERLIDTFSQIRSSRVCSCALWILSEYSTSVEDIHAALEVIRSGLGSMPFIKDKDEKDDAEEVE 499
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: A0A7S3CTS9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CTS9_9SPIT) HSP 1 Score: 66.6 bits (161), Expect = 4.540e-11 Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 1 EVVMTYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFL 192
EV +PEH++A+ + L ++ IK+ VLR+ +W+VGEYSE + DID AF IK +GS+P
Sbjct: 310 EVFEAHPEHQKALLQHLFNSIDSIKNHLVLRVTIWIVGEYSEQLSDIDQAFEAIKRNIGSLPIF 373
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: A0A4D8ZSP5_SALSN (Coatomer subunit beta n=15 Tax=Lamiales TaxID=4143 RepID=A0A4D8ZSP5_SALSN) HSP 1 Score: 65.9 bits (159), Expect = 8.990e-11 Identity = 29/78 (37.18%), Postives = 52/78 (66.67%), Query Frame = 1
Query: 1 EVVMTYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEEEEAEEAEK 234
E++ T P+ R +I RLL+ I+++ V ALW++GEYS S+ +++ A +TIK +G +PF ++ EE+A+ ++K
Sbjct: 421 EIIETNPKLRVSIVTRLLDTFYQIRAARVCSCALWIIGEYSLSLSEVESAISTIKQCLGDLPFFSISENEEDADSSKK 498
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: A0A5A7R4W3_STRAF (Coatomer n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7R4W3_STRAF) HSP 1 Score: 65.1 bits (157), Expect = 1.700e-10 Identity = 29/78 (37.18%), Postives = 51/78 (65.38%), Query Frame = 1
Query: 1 EVVMTYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEEEEAEEAEK 234
E++ T P+ R ++ RLL+ I+++ V ALW++GEYS S+ +++ A TIK +G +PF ++ EEE A+ ++K
Sbjct: 421 EIIETNPKLRVSVITRLLDTFYQIRAARVCSCALWIIGEYSLSLSEVESAIATIKQCLGQLPFFSLSEEEESADSSKK 498
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: A0A316YUF5_9BASI (Coatomer subunit beta n=1 Tax=Acaromyces ingoldii TaxID=215250 RepID=A0A316YUF5_9BASI) HSP 1 Score: 64.7 bits (156), Expect = 2.300e-10 Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 1 EVVMTYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEEEEAEEAE 231
EVV +P+ R +I +LL DIKS V R ALW+VGEY ES+ED+ A I+ VG VP L +EE E+AE
Sbjct: 422 EVVEKFPDLRSSILEKLLRTFGDIKSGKVFRGALWIVGEYCESIEDVQEAMQQIRKVVGEVPILA--AEERLLEQAE 496
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: A0A316ZAD6_9BASI (Coatomer subunit beta n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316ZAD6_9BASI) HSP 1 Score: 63.9 bits (154), Expect = 4.290e-10 Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 1 EVVMTYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVK 201
EVV +P+ R +I +LL+ DIKS V R ALW+VGEY+ S+ED+ A I+ VG VP L +
Sbjct: 422 EVVEKFPDLRSSIVEKLLQTFADIKSGKVFRGALWIVGEYAGSVEDVKEAMQQIRKVVGEVPILAAE 488 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112910.2684.1 >prot_M-pyrifera_M_contig112910.2684.1 ID=prot_M-pyrifera_M_contig112910.2684.1|Name=mRNA_M-pyrifera_M_contig112910.2684.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp MTYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTback to top mRNA from alignment at M-pyrifera_M_contig112910:64..297- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112910.2684.1 ID=mRNA_M-pyrifera_M_contig112910.2684.1|Name=mRNA_M-pyrifera_M_contig112910.2684.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=234bp|location=Sequence derived from alignment at M-pyrifera_M_contig112910:64..297- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112910:64..297- >mRNA_M-pyrifera_M_contig112910.2684.1 ID=mRNA_M-pyrifera_M_contig112910.2684.1|Name=mRNA_M-pyrifera_M_contig112910.2684.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig112910:64..297- (Macrocystis pyrifera P11B4 male)back to top |