prot_M-pyrifera_M_contig112879.2675.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112879.2675.1
Unique Nameprot_M-pyrifera_M_contig112879.2675.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length55
Homology
BLAST of mRNA_M-pyrifera_M_contig112879.2675.1 vs. uniprot
Match: A0A3D1G7Z7_9BACT (PINc domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1G7Z7_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 1.240e-12
Identity = 33/51 (64.71%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    1 IAFDISVTLSVTLYDACYIATAILTNSVFYTADERLVNGLSTTPLAKFVKG 51
            +AF++SV+L +TLYDA Y+ATA++TNSV YTADERLV  LSTT L +F+ G
Sbjct:   93 LAFELSVSLPLTLYDAFYLATAMVTNSVLYTADERLVRALSTTKLNEFISG 143          
BLAST of mRNA_M-pyrifera_M_contig112879.2675.1 vs. uniprot
Match: A0A2N0VLH7_9BACT (PINc domain-containing protein n=1 Tax=Rhodohalobacter barkolensis TaxID=2053187 RepID=A0A2N0VLH7_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 3.030e-8
Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    1 IAFDISVTLSVTLYDACYIATAILTNSVFYTADERLVNGLSTTPLAKFVK 50
            +AFDIS++L VT+YDA YIA A+   S  +TAD+RLV GL+TT  + +VK
Sbjct:   85 LAFDISISLPVTIYDALYIALAVEKQSEMWTADDRLVRGLNTTIFSDYVK 134          
BLAST of mRNA_M-pyrifera_M_contig112879.2675.1 vs. uniprot
Match: A0A2D9FUZ6_9BACT (PINc domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D9FUZ6_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 6.140e-8
Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    1 IAFDISVTLSVTLYDACYIATAILTNSVFYTADERLVNGLSTTPLAKFVK 50
            +AFDISV+L VT+YDA Y+A A+   ++ +TAD RLV GLS T L+K V+
Sbjct:   84 LAFDISVSLPVTMYDALYLALAMDNQTIMWTADNRLVRGLSNTVLSKHVE 133          
BLAST of mRNA_M-pyrifera_M_contig112879.2675.1 vs. uniprot
Match: A0A1B6YC68_9BACT (PINc domain-containing protein n=1 Tax=Balneola sp. EhC07 TaxID=1849360 RepID=A0A1B6YC68_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 8.340e-8
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 IAFDISVTLSVTLYDACYIATAILTNSVFYTADERLVNGLSTTPLAKFVK 50
            +AFDIS++L +T+YDA Y+A AI      YT+D RLVNGLSTT    +V+
Sbjct:   85 LAFDISISLPITIYDANYLALAIKKEGKLYTSDNRLVNGLSTTVFKDYVE 134          
BLAST of mRNA_M-pyrifera_M_contig112879.2675.1 vs. uniprot
Match: A0A316U0X2_9BACT (PINc domain-containing protein n=1 Tax=Rhodohalobacter mucosus TaxID=2079485 RepID=A0A316U0X2_9BACT)

HSP 1 Score: 52.8 bits (125), Expect = 3.240e-7
Identity = 26/50 (52.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    1 IAFDISVTLSVTLYDACYIATAILTNSVFYTADERLVNGLSTTPLAKFVK 50
            +AFD+S TL +TLYDACY++ AI  N    TAD R   G+  TP A FV+
Sbjct:   85 LAFDLSSTLPITLYDACYLSVAIEFNQTVTTADMRFYRGIKQTPFAHFVE 134          
BLAST of mRNA_M-pyrifera_M_contig112879.2675.1 vs. uniprot
Match: UPI001ED9E4B0 (type II toxin-antitoxin system VapC family toxin n=1 Tax=Rhodohalobacter sp. WB101 TaxID=2911366 RepID=UPI001ED9E4B0)

HSP 1 Score: 49.3 bits (116), Expect = 7.070e-6
Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 0
Query:    1 IAFDISVTLSVTLYDACYIATAILTNSVFYTADERLVNGLSTTP 44
            IAFD+S  LS+TLYDACY+A  I  +   +T+D+R  NG+  TP
Sbjct:   85 IAFDLSSGLSITLYDACYLAVGIEFDQKIFTSDKRFFNGMKNTP 128          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112879.2675.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A3D1G7Z7_9BACT1.240e-1264.71PINc domain-containing protein n=1 Tax=Balneolacea... [more]
A0A2N0VLH7_9BACT3.030e-856.00PINc domain-containing protein n=1 Tax=Rhodohaloba... [more]
A0A2D9FUZ6_9BACT6.140e-856.00PINc domain-containing protein n=1 Tax=Balneola sp... [more]
A0A1B6YC68_9BACT8.340e-854.00PINc domain-containing protein n=1 Tax=Balneola sp... [more]
A0A316U0X2_9BACT3.240e-752.00PINc domain-containing protein n=1 Tax=Rhodohaloba... [more]
UPI001ED9E4B07.070e-652.27type II toxin-antitoxin system VapC family toxin n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1010coord: 1..44
e-value: 2.3E-8
score: 36.5
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 2..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112879contigM-pyrifera_M_contig112879:2..166 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112879.2675.1mRNA_M-pyrifera_M_contig112879.2675.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112879 2..166 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112879.2675.1 ID=prot_M-pyrifera_M_contig112879.2675.1|Name=mRNA_M-pyrifera_M_contig112879.2675.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=55bp
IAFDISVTLSVTLYDACYIATAILTNSVFYTADERLVNGLSTTPLAKFVK
GFVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029060PIN-like_dom_sf