prot_M-pyrifera_M_contig112604.2628.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112604.2628.1
Unique Nameprot_M-pyrifera_M_contig112604.2628.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length175
Homology
BLAST of mRNA_M-pyrifera_M_contig112604.2628.1 vs. uniprot
Match: A0A7J7QJM7_9CHLO (Pseudouridine synthase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QJM7_9CHLO)

HSP 1 Score: 118 bits (296), Expect = 9.000e-28
Identity = 66/177 (37.29%), Postives = 101/177 (57.06%), Query Frame = 0
Query:    1 QRLGGGKWGAKRSESWEDGE--YGRFVVLKSGVDSSQMMRELSRALRVKQSRLGLAGTKDRYGVTVQEVSCYRLSPHVLGEVNKKLYNVRVGGLRFEKTGLHLGELWGNRFSIVLRQVTNPKAMHSLLTLWKEKGGGFVNYFGTQRFGNSRFHTAALGAAAFRGDPWECVRQLLQIG 175
            Q+ G  +W  +   SWE GE  + +FV+LK   D+   +  ++R L  +    G AGTKD+ GVT Q V+ +++SP  L  +N +L  +++G   F  + L LG+L GNRF +++R V++    H    + + +G GF+NYFG QRFG     T  +GAA  RG+    VR +LQ G
Sbjct:  202 QKRGKREW--RDDMSWEGGELKHVKFVMLKENTDTQAALGIVARMLHAQPRSFGFAGTKDKRGVTTQWVTAFKVSPAKLAALNPRLRGIKLGDFEFAASHLSLGQLGGNRFKLLMRDVSSSDEEHIASAVSELRGKGFLNYFGLQRFGIGAVPTHRVGAALLRGEWQAAVRLVLQGG 376          
BLAST of mRNA_M-pyrifera_M_contig112604.2628.1 vs. uniprot
Match: A0A383VEC4_TETOB (TRUD domain-containing protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VEC4_TETOB)

HSP 1 Score: 117 bits (293), Expect = 2.620e-27
Identity = 64/177 (36.16%), Postives = 101/177 (57.06%), Query Frame = 0
Query:    1 QRLGGGKWGAKRSESWEDGE--YGRFVVLKSGVDSSQMMRELSRALRVKQSRLGLAGTKDRYGVTVQEVSCYRLSPHVLGEVNKKLYNVRVGGLRFEKTGLHLGELWGNRFSIVLRQVTNPKAMHSLLTLWKEKGGGFVNYFGTQRFGNSRFHTAALGAAAFRGDPWECVRQLLQIG 175
            Q+ G  +W  +   SWE G+  + +FV+LK   D+   +  ++R L  +    G AGTKD+ GVT Q V+ +++SP  L  +N +L  +++G   F  + L LG+L GNRF +++R V++    H   T+ + +  GF+NYFG QRFG     T  +GAA  RG+    VR ++Q G
Sbjct:  198 QKRGKREW--RDEMSWEGGDLKHVKFVMLKENTDTQAALGVVARMLHCQPRSFGFAGTKDKRGVTTQWVTAFKVSPAKLAALNPRLRGIKLGNFEFAASHLSLGQLGGNRFKLLMRDVSSSDEQHIAATVSELRSKGFLNYFGLQRFGIGAVPTHRVGAALLRGEWQGAVRLVMQGG 372          
BLAST of mRNA_M-pyrifera_M_contig112604.2628.1 vs. uniprot
Match: A0A2P6V0Y5_9CHLO (Multisubstrate pseudouridine synthase 7 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0Y5_9CHLO)

HSP 1 Score: 117 bits (292), Expect = 3.530e-27
Identity = 66/162 (40.74%), Postives = 90/162 (55.56%), Query Frame = 0
Query:   13 SESWEDG--EYGRFVVLKSGVDSSQMMRELSRALRVKQSRLGLAGTKDRYGVTVQEVSCYRLSPHVLGEVNKKLYNVRVGGLRFEKTGLHLGELWGNRFSIVLRQVTNPKAMHSLLTLWKEKGGGFVNYFGTQRFGNSRFHTAALGAAAFRGDPWECVRQLL 172
            ++ W  G   Y RF++ K  +DS Q +  LS+ LR       +AGTKD+ GVTVQ+V+ +++ P  L  +N++L  +R+G   F    LHLG+L GNRF +VLR V    A          +  GFVNY+G QRFG     T  +GAA  RG   E VR LL
Sbjct:  192 ADDWAGGALRYTRFLLFKENMDSQQALSSLSKLLRCGHKVFSVAGTKDKRGVTVQQVTAFKVDPGRLAGLNRRLRGMRLGNFEFAADQLHLGDLRGNRFELVLRGVEAASADAVAEAAKGLRDTGFVNYYGLQRFGTGGVPTHRVGAALLRGQWREAVRMLL 353          
BLAST of mRNA_M-pyrifera_M_contig112604.2628.1 vs. uniprot
Match: A0A0V1JFB2_TRIPS (Methylated-DNA--protein-cysteine methyltransferase n=2 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V1JFB2_TRIPS)

HSP 1 Score: 113 bits (282), Expect = 7.150e-26
Identity = 61/157 (38.85%), Postives = 88/157 (56.05%), Query Frame = 0
Query:   18 DGEYGRFVVLKSGVDSSQMMRELSRALRVKQSRLGLAGTKDRYGVTVQEVSCYRLSPHVLGEVNKKLYNVRVGGLRFEKTGLHLGELWGNRFSIVLRQVT-NPKAMHSLLTLWKEKGGGFVNYFGTQRFGNSRFHTAALGAAAFRGDPWECVRQLLQ 173
            +GE+  FV+ K   DS+  + ++++ LR+    + +AGTKDR  VT Q  S YRL    L ++N +L+ VRVG   ++  G+ LG+L GNRF+IVLR +  N   +   +  WKE G  F+NY+G QRFG    HT  +G         E    LLQ
Sbjct:  153 EGEHCHFVIYKENTDSNVAIAKIAKLLRISPKTICIAGTKDRRAVTTQRASAYRLEAGQLLQLNNRLHGVRVGNCAYKPNGIFLGDLSGNRFTIVLRNIKENTDFVEECIKQWKEVG--FINYYGAQRFGTGFVHTHEVGKLMLNRKWKEAAELLLQ 307          
BLAST of mRNA_M-pyrifera_M_contig112604.2628.1 vs. uniprot
Match: A0A0V0XZJ7_TRIPS (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial n=3 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V0XZJ7_TRIPS)

HSP 1 Score: 113 bits (282), Expect = 8.180e-26
Identity = 61/157 (38.85%), Postives = 88/157 (56.05%), Query Frame = 0
Query:   18 DGEYGRFVVLKSGVDSSQMMRELSRALRVKQSRLGLAGTKDRYGVTVQEVSCYRLSPHVLGEVNKKLYNVRVGGLRFEKTGLHLGELWGNRFSIVLRQVT-NPKAMHSLLTLWKEKGGGFVNYFGTQRFGNSRFHTAALGAAAFRGDPWECVRQLLQ 173
            +GE+  FV+ K   DS+  + ++++ LR+    + +AGTKDR  VT Q  S YRL    L ++N +L+ VRVG   ++  G+ LG+L GNRF+IVLR +  N   +   +  WKE G  F+NY+G QRFG    HT  +G         E    LLQ
Sbjct:  153 EGEHCHFVIYKENTDSNVAIAKIAKLLRISPKTICIAGTKDRRAVTTQRASAYRLEAGQLLQLNNRLHGVRVGNCAYKPNGIFLGDLSGNRFTIVLRNIKENTDFVEECIKQWKEVG--FINYYGAQRFGTGFVHTHEVGKLMLNRKWKEAAELLLQ 307          
BLAST of mRNA_M-pyrifera_M_contig112604.2628.1 vs. uniprot
Match: A0A0V1D861_TRIBR (Pseudouridylate synthase 7-like protein n=7 Tax=Trichinella TaxID=6333 RepID=A0A0V1D861_TRIBR)

HSP 1 Score: 112 bits (280), Expect = 1.090e-25
Identity = 58/140 (41.43%), Postives = 84/140 (60.00%), Query Frame = 0
Query:   18 DGEYGRFVVLKSGVDSSQMMRELSRALRVKQSRLGLAGTKDRYGVTVQEVSCYRLSPHVLGEVNKKLYNVRVGGLRFEKTGLHLGELWGNRFSIVLRQVT-NPKAMHSLLTLWKEKGGGFVNYFGTQRFGNSRFHTAALG 156
            +GE+  FV+ K   DS+  + ++++ LR+    + +AGTKDR  VT Q  S YRL    L ++N +L+ VRVG   ++  G+ LG+L GNRF+IVLR V  N   +   +  WKE G  F+NY+G QRFG    HT  +G
Sbjct:  154 EGEHCHFVIYKENTDSNVAIAKIAKLLRISPKTICIAGTKDRRAVTTQRASAYRLEAGQLLQLNNRLHGVRVGNCAYKPNGIFLGDLNGNRFTIVLRNVKENTDFVEECIKQWKEVG--FINYYGAQRFGTGPVHTHEVG 291          
BLAST of mRNA_M-pyrifera_M_contig112604.2628.1 vs. uniprot
Match: A0A6S7L0H3_PARCT (Pseudouridylate synthase 7 homolog isoform X2 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7L0H3_PARCT)

HSP 1 Score: 112 bits (280), Expect = 1.290e-25
Identity = 66/166 (39.76%), Postives = 94/166 (56.63%), Query Frame = 0
Query:   11 KRSESW--EDGEYGRFVVLKSGVDSSQMMRELSRALRVKQSRLGLAGTKDRYGVTVQEVSCYRLSPHVLGEVNKKLYNVRVGGLRFEKTGLHLGELWGNRFSIVLRQVTNPKAMHSLLT--LWKEKGGGFVNYFGTQRFGNSRFHTAALGAAAFRGDPWECVRQLL 172
            +R   W  + GEY   VV K   D+ Q++  L++ L++K  R   AGTKD   +TVQ VS +R+    L  +NK L N+RVG   F+KT L LG+L GN F +VLR   N  A   L+T  +   K  GF+NY+G QRFG+S+  T A+G    + +  E +  +L
Sbjct:  204 RRKNDWPKDRGEYCHLVVYKENKDTMQVINLLAKCLKIKPDRFSYAGTKDGRAITVQSVSVFRIDARHLQGLNKVLNNIRVGNFEFKKTPLKLGDLKGNTFVVVLR---NVGASDELITTAMSSLKNIGFINYYGLQRFGSSKNATHAMGLCLLKSEWSEAIDLIL 366          
BLAST of mRNA_M-pyrifera_M_contig112604.2628.1 vs. uniprot
Match: A0A0V0UEE1_9BILA (Microfibrillar-associated protein 1 n=9 Tax=Trichinella TaxID=6333 RepID=A0A0V0UEE1_9BILA)

HSP 1 Score: 112 bits (280), Expect = 1.500e-25
Identity = 58/140 (41.43%), Postives = 84/140 (60.00%), Query Frame = 0
Query:   18 DGEYGRFVVLKSGVDSSQMMRELSRALRVKQSRLGLAGTKDRYGVTVQEVSCYRLSPHVLGEVNKKLYNVRVGGLRFEKTGLHLGELWGNRFSIVLRQVT-NPKAMHSLLTLWKEKGGGFVNYFGTQRFGNSRFHTAALG 156
            +GE+  FV+ K   DS+  + ++++ LR+    + +AGTKDR  VT Q  S YRL    L ++N +L+ VRVG   ++  G+ LG+L GNRF+IVLR V  N   +   +  WKE G  F+NY+G QRFG    HT  +G
Sbjct:  576 EGEHCHFVIYKENTDSNVAIAKIAKLLRISPKTICIAGTKDRRAVTTQRASAYRLEAGQLLQLNNRLHGVRVGNCAYKPNGIFLGDLNGNRFTIVLRNVKENTDFVEECIKQWKEVG--FINYYGAQRFGTGPVHTHEVG 713          
BLAST of mRNA_M-pyrifera_M_contig112604.2628.1 vs. uniprot
Match: A0A7S1C7Y1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7Y1_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.320e-25
Identity = 65/175 (37.14%), Postives = 98/175 (56.00%), Query Frame = 0
Query:    2 RLGGGKWGAKRSESWEDGE--YGRFVVLKSGVDSSQMMRELSRALRVKQSRLGLAGTKDRYGVTVQEVSCYRLSPHVLGEVNKKLYN-VRVGGLRFEKTGLHLGELWGNRFSIVLRQVTNP-KAMHSLLTLWKEKGGGFVNYFGTQRFGNSRFHTAALGAAAFRGDPWECVRQLL 172
            R+   + G +R+  W  G   Y RFV+ K  +++   +R+L+R L V +   G AG KD+  VT Q  + YRL+P  L EVNK+  + + VGG  F    L LG+  GNRF++V+R+V+ P + + + +  W     GFVNYFG QRFG     T  +G A  + + W+ V  L+
Sbjct:  183 RMAPKRGGQRRAPQWPAGRPSYLRFVLYKQNLETPAALRQLARTLYVNEKVFGFAGMKDKRAVTTQLCTAYRLAPEKLAEVNKRGSDGLAVGGFTFVDKPLRLGDNTGNRFTLVIREVSKPAEVVEAAVRAWST--AGFVNYFGLQRFGTQAVPTHHIGRAVLKHE-WDLVVDLI 354          
BLAST of mRNA_M-pyrifera_M_contig112604.2628.1 vs. uniprot
Match: A0A4P9Z3F8_9FUNG (Pseudouridine synthase (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z3F8_9FUNG)

HSP 1 Score: 110 bits (276), Expect = 3.100e-25
Identity = 68/163 (41.72%), Postives = 91/163 (55.83%), Query Frame = 0
Query:   15 SWED--GEYGRFVVLKSGVDSSQMMRELSRALRVKQSRLGLAGTKDRYGVTVQEVSCYRLSPHVLGEVNKKLYNVRVGGLRFEKTGLHLGELWGNRFSIVLRQV---TNPKAMHSLLTLWKEKGGGFVNYFGTQRFGNSRFHTAALGAAAFRGDPWECVRQLL 172
            SW++  G Y  F++ K G D+   +  + R  R+       AGTKDR  VTVQ V+ ++++   L +VN+    VRVG  R+ K  L LG+L GNRF IVLR V   T      SL++L +    GF+NY+GTQRFG     T  +GA   R D WE V QLL
Sbjct:   61 SWDEMPGHYCEFLLYKEGKDTMDAIDHICRTTRLHTKVFSYAGTKDRQAVTVQRVTAHKVTADRLLQVNQHRAPVRVGNFRYVKQSLRLGDLGGNRFVIVLRDVKGCTEDALKTSLVSLSEH---GFINYYGTQRFGTGTVPTQQIGACMLRAD-WERVTQLL 219          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112604.2628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J7QJM7_9CHLO9.000e-2837.29Pseudouridine synthase n=1 Tax=Scenedesmus sp. NRE... [more]
A0A383VEC4_TETOB2.620e-2736.16TRUD domain-containing protein n=2 Tax=Tetradesmus... [more]
A0A2P6V0Y5_9CHLO3.530e-2740.74Multisubstrate pseudouridine synthase 7 n=1 Tax=Mi... [more]
A0A0V1JFB2_TRIPS7.150e-2638.85Methylated-DNA--protein-cysteine methyltransferase... [more]
A0A0V0XZJ7_TRIPS8.180e-2638.85Pyruvate dehydrogenase E1 component subunit beta, ... [more]
A0A0V1D861_TRIBR1.090e-2541.43Pseudouridylate synthase 7-like protein n=7 Tax=Tr... [more]
A0A6S7L0H3_PARCT1.290e-2539.76Pseudouridylate synthase 7 homolog isoform X2 n=2 ... [more]
A0A0V0UEE1_9BILA1.500e-2541.43Microfibrillar-associated protein 1 n=9 Tax=Trichi... [more]
A0A7S1C7Y1_9STRA2.320e-2537.14Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A4P9Z3F8_9FUNG3.100e-2541.72Pseudouridine synthase (Fragment) n=1 Tax=Syncepha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001656Pseudouridine synthase, TruDPFAMPF01142TruDcoord: 15..172
e-value: 1.3E-34
score: 119.8
IPR001656Pseudouridine synthase, TruDPANTHERPTHR13326TRNA PSEUDOURIDINE SYNTHASE Dcoord: 17..172
IPR042214Pseudouridine synthase, TruD, catalytic domainGENE3D3.30.2350.20coord: 9..161
e-value: 3.3E-38
score: 132.6
NoneNo IPR availablePANTHERPTHR13326:SF21PSEUDOURIDYLATE SYNTHASE 7 HOMOLOGcoord: 17..172
IPR020119Pseudouridine synthase TruD, conserved sitePROSITEPS01268UPF0024coord: 55..68
IPR011760Pseudouridine synthase, TruD, insertion domainPROSITEPS50984TRUDcoord: 135..175
score: 12.883
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 16..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112604contigM-pyrifera_M_contig112604:60..584 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112604.2628.1mRNA_M-pyrifera_M_contig112604.2628.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112604 60..584 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112604.2628.1 ID=prot_M-pyrifera_M_contig112604.2628.1|Name=mRNA_M-pyrifera_M_contig112604.2628.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp
QRLGGGKWGAKRSESWEDGEYGRFVVLKSGVDSSQMMRELSRALRVKQSR
LGLAGTKDRYGVTVQEVSCYRLSPHVLGEVNKKLYNVRVGGLRFEKTGLH
LGELWGNRFSIVLRQVTNPKAMHSLLTLWKEKGGGFVNYFGTQRFGNSRF
HTAALGAAAFRGDPWECVRQLLQIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001656PsdUridine_synth_TruD
IPR042214TruD_catalytic
IPR020119PsdUridine_synth_TruD_CS
IPR011760PsdUridine_synth_TruD_insert
IPR020103PsdUridine_synth_cat_dom_sf