mRNA_M-pyrifera_M_contig11146.2380.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11146.2380.1 vs. uniprot
Match: A0A6H5L4N8_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4N8_9PHAE) HSP 1 Score: 277 bits (709), Expect = 1.240e-84 Identity = 139/150 (92.67%), Postives = 145/150 (96.67%), Query Frame = 1
Query: 7 GQSRHRDTIVVCTLDGPKVTSIRALLTPPPNRELRVKSEYVHHKAISGAIGVKLCATGIEKAVAGTPIMVVGPEDDEEDIKEEVMRDFTDLMKMDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 456
G+ + D IVVCTLDGP VT+IRALLTPPPNRELR+KSEYVHHKAISGAIGVK+CATGIEKAVAGTPIMVVGP+DDEEDIKEEVMRDFTDLMKMDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK
Sbjct: 729 GRLKEGDAIVVCTLDGPVVTNIRALLTPPPNRELRIKSEYVHHKAISGAIGVKICATGIEKAVAGTPIMVVGPDDDEEDIKEEVMRDFTDLMKMDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 878
BLAST of mRNA_M-pyrifera_M_contig11146.2380.1 vs. uniprot
Match: A0A836CHS5_9STRA (Tr-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHS5_9STRA) HSP 1 Score: 233 bits (594), Expect = 1.340e-68 Identity = 112/150 (74.67%), Postives = 135/150 (90.00%), Query Frame = 1
Query: 7 GQSRHRDTIVVCTLDGPKVTSIRALLTPPPNRELRVKSEYVHHKAISGAIGVKLCATGIEKAVAGTPIMVVGPEDDEEDIKEEVMRDFTDLMKMDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 456
G R D IVVCTLDGP VTSIRA+LTPPP+RELR+KSEY+HHK I GA+GVK+CA GIE+A+AGTPIMV+G +D+E+DIKEEVM+DFT++MKMDL+ +GV+VQASTLGALEALMQFLRKECDPPIPV +V IG ++++DVMRASIM EK
Sbjct: 676 GALRENDRIVVCTLDGPVVTSIRAVLTPPPSRELRIKSEYIHHKEIYGAMGVKICAQGIERAIAGTPIMVIGKDDNEDDIKEEVMKDFTNVMKMDLDTRGVIVQASTLGALEALMQFLRKECDPPIPVSSVNIGPIYRRDVMRASIMLEK 825
BLAST of mRNA_M-pyrifera_M_contig11146.2380.1 vs. uniprot
Match: A0A7S1D5X2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5X2_CYCTE) HSP 1 Score: 200 bits (509), Expect = 1.330e-60 Identity = 98/151 (64.90%), Postives = 119/151 (78.81%), Query Frame = 1
Query: 7 GQSRHRDTIVVCTLDGPKVTSIRALLTPPPNRELRVKSEYVHHKAISGAIGVKLCATGIEKAVAGTPIMVVGPEDDEEDIKEEVMRDFTDLM-KMDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 456
G R D V CTLDGP V IR LLTPPP+RE+RVKS+Y+HHKA+ GA+GVK+ G+EK +AGTP+MVVGP+D+EEDIK EVM D T L K+ + KGVMVQASTLGALEAL+QFLR+E PPIPV A+GIG + K+D+ + SIMNEK
Sbjct: 37 GYLREGDRAVFCTLDGPIVAEIRGLLTPPPSREMRVKSDYIHHKAVKGALGVKVIGNGLEKVMAGTPVMVVGPDDEEEDIKAEVMSDLTSLQSKLSTDKKGVMVQASTLGALEALLQFLREETQPPIPVSAIGIGTIHKRDITKISIMNEK 187
BLAST of mRNA_M-pyrifera_M_contig11146.2380.1 vs. uniprot
Match: A0A7S1FS56_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FS56_9STRA) HSP 1 Score: 201 bits (512), Expect = 2.830e-57 Identity = 101/151 (66.89%), Postives = 121/151 (80.13%), Query Frame = 1
Query: 7 GQSRHRDTIVVCTLDGPKVTSIRALLTPPPNRELRVKSEYVHHKAISGAIGVKLCATGIEKAVAGTPIMVVGPEDDEEDIKEEVMRDFTDLM-KMDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 456
G R D +V+CTL+GP V+ IR LLTPPP+RELR+KS+Y+HHK I GA+GVKL G EK +AGTP++VVG EDDEEDIK EVM D T L K++ + KGVMVQASTLGALEAL+QFLR+E PPIPV A+GIG++FKKDV R SIM EK
Sbjct: 655 GYLREGDKVVLCTLEGPVVSEIRGLLTPPPSRELRIKSDYIHHKEIKGALGVKLIGNGFEKVMAGTPVLVVGSEDDEEDIKAEVMSDLTRLEEKLNTDKKGVMVQASTLGALEALLQFLREETKPPIPVSAIGIGSIFKKDVTRISIMREK 805
BLAST of mRNA_M-pyrifera_M_contig11146.2380.1 vs. uniprot
Match: A0A482S4F3_9ARCH (Translation initiation factor IF-2 (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S4F3_9ARCH) HSP 1 Score: 196 bits (499), Expect = 1.310e-56 Identity = 103/151 (68.21%), Postives = 121/151 (80.13%), Query Frame = 1
Query: 7 GQSRHRDTIVVCTLDGPKVTSIRALLTPPPNRELRVKSEYVHHKAISGAIGVKLCATGIEKAVAGTPIMVVGPEDDEEDIKEEVMRDFTDLMK-MDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 456
G R DTIVV T+DGP VTSIRALLTPPPNRE+RVKS+YVHH+ ISGAIGVK+ A I +AVAGTP++VV DD E++K+EV D T +MK + E KGVMV ASTLGALEAL+Q+LR+EC PPIPV V IG + KKDVMRASIM+EK
Sbjct: 349 GTLREGDTIVVSTMDGPVVTSIRALLTPPPNREMRVKSDYVHHQVISGAIGVKIVAPDIGRAVAGTPVLVVQEGDDVEEVKDEVQSDLTKVMKSLQTENKGVMVHASTLGALEALLQYLREECKPPIPVNFVNIGPIHKKDVMRASIMHEK 499
BLAST of mRNA_M-pyrifera_M_contig11146.2380.1 vs. uniprot
Match: A0A7S0CGW3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGW3_9STRA) HSP 1 Score: 189 bits (481), Expect = 1.630e-56 Identity = 91/151 (60.26%), Postives = 119/151 (78.81%), Query Frame = 1
Query: 7 GQSRHRDTIVVCTLDGPKVTSIRALLTPPPNRELRVKSEYVHHKAISGAIGVKLCATGIEKAVAGTPIMVVGPEDDEEDIKEEVMRDFTDLM-KMDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 456
G + DT + C+LDGP VT IR LLTPPP+RE+RVKS+Y+HHK + GA+GVK+ G++K +AGTP+M+ G D+EEDIKEEVM D + L K++ + KGVMVQASTLGALEAL+QFLR++ PPIPV A+GIG + K+DV + SIMNE+
Sbjct: 27 GYVKEGDTAIFCSLDGPVVTEIRGLLTPPPSREMRVKSDYIHHKQVKGALGVKIIGNGLDKVMAGTPMMICGEYDEEEDIKEEVMSDLSKLTNKLNTDSKGVMVQASTLGALEALLQFLREDTKPPIPVSAIGIGTIHKRDVTKISIMNER 177
BLAST of mRNA_M-pyrifera_M_contig11146.2380.1 vs. uniprot
Match: A0A7S2KAZ8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KAZ8_9STRA) HSP 1 Score: 199 bits (505), Expect = 2.580e-56 Identity = 101/151 (66.89%), Postives = 118/151 (78.15%), Query Frame = 1
Query: 7 GQSRHRDTIVVCTLDGPKVTSIRALLTPPPNRELRVKSEYVHHKAISGAIGVKLCATGIEKAVAGTPIMVVGPEDDEEDIKEEVMRDFTDLM-KMDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 456
G R D V CTLDGP VT IR LLTPPP+RE+RVKSEY+HHK I GA+GVKL G+EK +AGTP+MVVG D+EEDIKEEVM D + L K+ + KGVMVQASTLGALEAL+QFLR+E PPIPV A+GIG + K+DV + SIMNEK
Sbjct: 654 GYLREGDKAVFCTLDGPVVTEIRGLLTPPPSREMRVKSEYIHHKEIKGALGVKLIGNGLEKVMAGTPVMVVGEYDEEEDIKEEVMSDLSRLQDKLSTDKKGVMVQASTLGALEALLQFLREETKPPIPVSAIGIGTIHKRDVTKISIMNEK 804
BLAST of mRNA_M-pyrifera_M_contig11146.2380.1 vs. uniprot
Match: A0A812TG67_SYMMI (Eukaryotic translation initiation factor 5B n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TG67_SYMMI) HSP 1 Score: 195 bits (495), Expect = 3.010e-56 Identity = 103/151 (68.21%), Postives = 120/151 (79.47%), Query Frame = 1
Query: 7 GQSRHRDTIVVCTLDGPKVTSIRALLTPPPNRELRVKSEYVHHKAISGAIGVKLCATGIEKAVAGTPIMVVGPEDDEEDIKEEVMRDFTDLMK-MDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 456
G R DTIVV TL+GP VT+IRALLTPPPNRE+RVKSEYVHH+AI+GAIGVK+ A I +AVAGT ++V EDD +DIKEEV D T + K + E KGVMV ASTLGALEAL+QFLR ECDPPIPV + IG + KKDVMRA+IMNE+
Sbjct: 314 GTLREGDTIVVSTLEGPVVTTIRALLTPPPNREMRVKSEYVHHQAITGAIGVKIVAPDISRAVAGTSVLVKLEEDDLDDIKEEVQSDLTQVFKALSTENKGVMVHASTLGALEALLQFLRDECDPPIPVCHIYIGPIHKKDVMRANIMNER 464
BLAST of mRNA_M-pyrifera_M_contig11146.2380.1 vs. uniprot
Match: B8BV18_THAPS (Tr-type G domain-containing protein n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BV18_THAPS) HSP 1 Score: 192 bits (488), Expect = 1.550e-55 Identity = 96/151 (63.58%), Postives = 116/151 (76.82%), Query Frame = 1
Query: 7 GQSRHRDTIVVCTLDGPKVTSIRALLTPPPNRELRVKSEYVHHKAISGAIGVKLCATGIEKAVAGTPIMVVGPEDDEEDIKEEVMRDFTDLM-KMDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 456
G R D V CTLDGP V IR LLTPPP+RE+R+KSEY+HHK I GA+GVK+ G+EK +AGT ++VVGP+D+ EDIK EVM D T L K+ + KGVMVQASTLGALEAL+QFLR+E PPIPV A+GIG + K+DV + SIMNEK
Sbjct: 248 GYLREGDRAVFCTLDGPIVAEIRGLLTPPPSREMRIKSEYIHHKEIKGALGVKVIGNGLEKVMAGTSVLVVGPDDEVEDIKAEVMSDLTKLQDKLSTDKKGVMVQASTLGALEALLQFLREETKPPIPVSAIGIGTIHKRDVTKISIMNEK 398
BLAST of mRNA_M-pyrifera_M_contig11146.2380.1 vs. uniprot
Match: A0A7R9WHP7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WHP7_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.740e-55 Identity = 98/151 (64.90%), Postives = 118/151 (78.15%), Query Frame = 1
Query: 7 GQSRHRDTIVVCTLDGPKVTSIRALLTPPPNRELRVKSEYVHHKAISGAIGVKLCATGIEKAVAGTPIMVVGPEDDEEDIKEEVMRDFTDLM-KMDLEPKGVMVQASTLGALEALMQFLRKECDPPIPVFAVGIGAVFKKDVMRASIMNEK 456
G R D V CTLDGP VT IR LLTPPP+RE+RVK++Y+HHK I GA+GVK+ +EK +AGTP+MVVG D+EEDIK EVM D T + K+ ++ KGVMVQASTLGALEAL+QFLR+E +PPIPV AVGIG V K+DV + SIMNEK
Sbjct: 438 GYLREGDRAVFCTLDGPVVTEIRGLLTPPPSREMRVKADYIHHKEIKGALGVKVIGNNLEKVMAGTPVMVVGEHDEEEDIKAEVMSDLTRIQEKLSVDKKGVMVQASTLGALEALLQFLREETEPPIPVSAVGIGTVHKRDVTKISIMNEK 588 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11146.2380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11146.2380.1 >prot_M-pyrifera_M_contig11146.2380.1 ID=prot_M-pyrifera_M_contig11146.2380.1|Name=mRNA_M-pyrifera_M_contig11146.2380.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp FVGQSRHRDTIVVCTLDGPKVTSIRALLTPPPNRELRVKSEYVHHKAISGback to top mRNA from alignment at M-pyrifera_M_contig11146:6707..9139+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11146.2380.1 ID=mRNA_M-pyrifera_M_contig11146.2380.1|Name=mRNA_M-pyrifera_M_contig11146.2380.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2433bp|location=Sequence derived from alignment at M-pyrifera_M_contig11146:6707..9139+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11146:6707..9139+ >mRNA_M-pyrifera_M_contig11146.2380.1 ID=mRNA_M-pyrifera_M_contig11146.2380.1|Name=mRNA_M-pyrifera_M_contig11146.2380.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=912bp|location=Sequence derived from alignment at M-pyrifera_M_contig11146:6707..9139+ (Macrocystis pyrifera P11B4 male)back to top |