prot_M-pyrifera_M_contig1011.234.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig1011.234.1
Unique Name	prot_M-pyrifera_M_contig1011.234.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	201

Homology

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BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: D7FYI4_ECTSI (S5 DRBM domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=D7FYI4_ECTSI)

HSP 1 Score: 382 bits (980), Expect = 1.640e-132
Identity = 192/199 (96.48%), Postives = 195/199 (97.99%), Query Frame = 0

Query:    1 MAIKAEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAKNPTPKAAE 199
            MAIK EYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDE+GHVGLGVKCAKEVATAIRGAII AKMSVVPVRRGYWGRRNG+PHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELW PT+FQSAPYQEHTDFLAKNP PKAAE
Sbjct:   83 MAIK-EYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESGHVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAKNPAPKAAE 280

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BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A0A835Z6C9_9STRA (40S ribosomal protein S2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C9_9STRA)

HSP 1 Score: 331 bits (848), Expect = 7.730e-113
Identity = 163/187 (87.17%), Postives = 172/187 (91.98%), Query Frame = 0

Query:    6 EYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAKN 192
            E QIVD FLG KLKDEVMKIMPVQKVSAAGQITRFKAFVAVGD NGHVGLGVKCAKEVATAIRGAI  AKMSVVP+RRGYWGRRNG PHTVP KVTGKCGSVRVRLIPAPRGTGLVA+PV +KLL MAGVEDCYT S GHTRT+GNFVKAV+FAL KTYGYLSPELW PT F+++PYQEHTDFLAK+
Sbjct:   63 ECQIVDKFLGDKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDSNGHVGLGVKCAKEVATAIRGAITIAKMSVVPIRRGYWGRRNGQPHTVPCKVTGKCGSVRVRLIPAPRGTGLVASPVSRKLLGMAGVEDCYTCSNGHTRTMGNFVKAVFFALGKTYGYLSPELWAPTQFKASPYQEHTDFLAKS 249

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BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A0A7S4UVA6_9DINO (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S4UVA6_9DINO)

HSP 1 Score: 307 bits (786), Expect = 4.750e-103
Identity = 153/186 (82.26%), Postives = 167/186 (89.78%), Query Frame = 0

Query:    6 EYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAK 191
            EYQIVD+FL + LKDEVMKIMPVQK SAAGQ TRFKAFVAVGD NGHVGLGVKCA EVATAIRGAII AK+SVVP+RRGYWG++ GLPHTV NKVTGKCGSV VRLIPAPRGTGLVA+PVPKKLL MAGVED Y+ S GHTRT+GNF+KAVY AL+KTYGYLSPELW PT+F   PYQE+TDFL+K
Sbjct:   76 EYQIVDYFLPN-LKDEVMKIMPVQKQSAAGQRTRFKAFVAVGDYNGHVGLGVKCASEVATAIRGAIILAKISVVPIRRGYWGKKVGLPHTVANKVTGKCGSVSVRLIPAPRGTGLVASPVPKKLLGMAGVEDVYSQSTGHTRTMGNFIKAVYTALSKTYGYLSPELWKPTVFTPTPYQEYTDFLSK 260

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BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A0A024U0H5_9STRA (40S ribosomal protein S2 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U0H5_9STRA)

HSP 1 Score: 305 bits (780), Expect = 2.340e-102
Identity = 147/186 (79.03%), Postives = 164/186 (88.17%), Query Frame = 0

Query:    6 EYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAK 191
            E +IVD+FL  +LKDEVMKIMPVQK + AGQ TRFKAFVAVGD  GHVGLGVKCAKEVATAIRGAII AKM++VPVRRGYWG+ +GLPHTV NKVTGKCGSVRVRLIPAPRGTGL AAP PKKLL MAG+EDCYTS+RGHTRTLGNFVKA ++AL  TY YL+P+LWTPT F   PYQEH+D+L+K
Sbjct:   72 ESEIVDYFLKDRLKDEVMKIMPVQKQTTAGQRTRFKAFVAVGDHAGHVGLGVKCAKEVATAIRGAIINAKMNLVPVRRGYWGKMSGLPHTVCNKVTGKCGSVRVRLIPAPRGTGLCAAPAPKKLLGMAGIEDCYTSARGHTRTLGNFVKATFYALRATYAYLTPDLWTPTKFTPTPYQEHSDYLSK 257

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BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A0A7R9UB19_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB19_9STRA)

HSP 1 Score: 305 bits (780), Expect = 2.770e-102
Identity = 150/191 (78.53%), Postives = 169/191 (88.48%), Query Frame = 0

Query:    1 MAIKAEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAK 191
            M IK E  IVD FLG KLKDEVMKIMPVQK + AGQ TRFKAFVAVGDE+GHVGLGVKCAKEVATAIRGAI  AK++++PVRRGYWGR+ G PHTVP  VTGKCGSVRVRLIPAPRGTGLVAAP  K++L++AG+EDCYTSSRGHTRT+GNF+KAV+FAL+KTYG+L+P+LWTPT F    YQEHTDFLAK
Sbjct:   66 MPIK-EAPIVDHFLGPKLKDEVMKIMPVQKQTTAGQRTRFKAFVAVGDEDGHVGLGVKCAKEVATAIRGAISNAKLALIPVRRGYWGRKLGNPHTVPTAVTGKCGSVRVRLIPAPRGTGLVAAPATKRILALAGLEDCYTSSRGHTRTMGNFIKAVFFALSKTYGFLTPDLWTPTTFMPHLYQEHTDFLAK 255

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BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A0A484DZT2_BRELC (S5 DRBM domain-containing protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=A0A484DZT2_BRELC)

HSP 1 Score: 301 bits (772), Expect = 3.720e-101
Identity = 147/186 (79.03%), Postives = 163/186 (87.63%), Query Frame = 0

Query:    6 EYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAK 191
            E +IV++FL + LKDEVMKIMPVQK + AGQ TRFKAFVAVGD NGH+GLGVKCAKEVATAIRGAII AK+S+VPVRRGYWGR  G PHTVPNKVTGKCGSVRVRLIPAPRGTGL AAPVPKKLL MAG+EDCYTS+RGHTRTLGNFVKA ++AL  TY YL+P+LW    F  +PYQE+TDFLAK
Sbjct:   71 ECEIVNYFLEASLKDEVMKIMPVQKQTTAGQRTRFKAFVAVGDSNGHIGLGVKCAKEVATAIRGAIILAKISLVPVRRGYWGRMVGAPHTVPNKVTGKCGSVRVRLIPAPRGTGLCAAPVPKKLLGMAGIEDCYTSARGHTRTLGNFVKATFYALRATYAYLTPDLWEQHTFGQSPYQEYTDFLAK 256

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BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A7L6A1_ARTSF (40S ribosomal protein S2 (Fragment) n=1 Tax=Artemia franciscana TaxID=6661 RepID=A7L6A1_ARTSF)

HSP 1 Score: 300 bits (767), Expect = 8.850e-101
Identity = 142/194 (73.20%), Postives = 167/194 (86.08%), Query Frame = 0

Query:    6 EYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAKNPTPKAAE 199
            E++I+DFFLG  LKDEV+KIMPVQK + AGQ TRFKAFVA+GD NGH+GLGVKC+KEVATAIRGAII AK+S+VPVRRGYWG + G PHTVP+KVTGKCGSV VRLIPAPRGTG+V+APVPKKLL MAG+EDCYT++ G T TLGNF KA Y A+ KTY YL+P+LWT T+FQ +PYQE TD+L+KN  P  A+
Sbjct:   35 EFEIIDFFLGPSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDHNGHIGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPSKVTGKCGSVLVRLIPAPRGTGIVSAPVPKKLLQMAGIEDCYTTAVGSTGTLGNFAKATYTAIGKTYSYLTPDLWTETVFQKSPYQEFTDYLSKNHKPIGAQ 228

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BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A0A0P5E9E5_9CRUS (40S ribosomal protein S2 (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5E9E5_9CRUS)

HSP 1 Score: 301 bits (770), Expect = 1.120e-100
Identity = 143/190 (75.26%), Postives = 166/190 (87.37%), Query Frame = 0

Query:    6 EYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAKNPTP 195
            E++I+DFFLG+ LKDEV+KIMPVQK + AGQ TRFKAFVA+GD NGH+GLGVKC+KEVATAIRGAII AK+SVVPVRRGYWG + G PHTVP KVTGKCGSV VRLIP PRGTG+V+APVPKKLL MAG+EDCYT++RG T TLGNF KA Y A+AKTY YL+P+LWT T+F ++PYQEH+DFL KN  P
Sbjct:   73 EFEIIDFFLGTALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHIGLGVKCSKEVATAIRGAIIMAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPGPRGTGIVSAPVPKKLLQMAGIEDCYTAARGSTGTLGNFAKATYAAIAKTYAYLTPDLWTETVFNNSPYQEHSDFLMKNHRP 262

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BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A0A0P4Z4H9_9CRUS (40S ribosomal protein S2 n=8 Tax=Daphnia TaxID=6668 RepID=A0A0P4Z4H9_9CRUS)

HSP 1 Score: 301 bits (770), Expect = 1.420e-100
Identity = 143/190 (75.26%), Postives = 166/190 (87.37%), Query Frame = 0

Query:    6 EYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAKNPTP 195
            E++I+DFFLG+ LKDEV+KIMPVQK + AGQ TRFKAFVA+GD NGH+GLGVKC+KEVATAIRGAII AK+SVVPVRRGYWG + G PHTVP KVTGKCGSV VRLIP PRGTG+V+APVPKKLL MAG+EDCYT++RG T TLGNF KA Y A+AKTY YL+P+LWT T+F ++PYQEH+DFL KN  P
Sbjct:   80 EFEIIDFFLGTALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHIGLGVKCSKEVATAIRGAIIMAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPGPRGTGIVSAPVPKKLLQMAGIEDCYTAARGSTGTLGNFAKATYAAIAKTYAYLTPDLWTETVFNNSPYQEHSDFLMKNHRP 269

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BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A0A067CWA9_SAPPC (40S ribosomal protein S2 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CWA9_SAPPC)

HSP 1 Score: 300 bits (767), Expect = 2.070e-100
Identity = 145/186 (77.96%), Postives = 159/186 (85.48%), Query Frame = 0

Query:    6 EYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAK 191
            E +IVD+FL  +LKDEVMKIMPVQK + AGQ TRFKAFVAVGD  GH+GLGVKCAKEVATAIRGAI+ AKMS+VPVRRGYWG  +GLPHTV NKVTGKCGSVRVRLIPAPRGTGL AAP PKKLL MAG+EDCYTS+RGHTRTLGNFVKA Y+AL  TY YL+P+LW    F   PYQEH DFL+K
Sbjct:   70 ESEIVDYFLKDRLKDEVMKIMPVQKQTTAGQRTRFKAFVAVGDHAGHIGLGVKCAKEVATAIRGAIVQAKMSLVPVRRGYWGNMSGLPHTVCNKVTGKCGSVRVRLIPAPRGTGLCAAPAPKKLLGMAGIEDCYTSARGHTRTLGNFVKATYYALRNTYSYLTPDLWAENKFGKTPYQEHADFLSK 255

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FYI4_ECTSI	1.640e-132	96.48	S5 DRBM domain-containing protein n=3 Tax=Eukaryot...	[more]
A0A835Z6C9_9STRA	7.730e-113	87.17	40S ribosomal protein S2 n=1 Tax=Tribonema minus T...	[more]
A0A7S4UVA6_9DINO	4.750e-103	82.26	Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep...	[more]
A0A024U0H5_9STRA	2.340e-102	79.03	40S ribosomal protein S2 n=3 Tax=Aphanomyces TaxID...	[more]
A0A7R9UB19_9STRA	2.770e-102	78.53	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A484DZT2_BRELC	3.720e-101	79.03	S5 DRBM domain-containing protein n=7 Tax=Peronosp...	[more]
A7L6A1_ARTSF	8.850e-101	73.20	40S ribosomal protein S2 (Fragment) n=1 Tax=Artemi...	[more]
A0A0P5E9E5_9CRUS	1.120e-100	75.26	40S ribosomal protein S2 (Fragment) n=1 Tax=Daphni...	[more]
A0A0P4Z4H9_9CRUS	1.420e-100	75.26	40S ribosomal protein S2 n=8 Tax=Daphnia TaxID=666...	[more]
A0A067CWA9_SAPPC	2.070e-100	77.96	40S ribosomal protein S2 n=4 Tax=Saprolegniaceae T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 18..82 e-value: 3.7E-27 score: 94.1
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 18..81 score: 22.166
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 81..173 e-value: 1.6E-46 score: 158.6
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 101..167 e-value: 2.3E-25 score: 87.8
None	No IPR available	GENE3D	3.30.160.770		coord: 1..80 e-value: 8.3E-35 score: 121.2
None	No IPR available	PANTHER	PTHR13718:SF4	40S RIBOSOMAL PROTEIN S2-RELATED	coord: 4..192
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 12..83
IPR005711	Ribosomal protein S5, eukaryotic/archaeal	TIGRFAM	TIGR01020	TIGR01020	coord: 6..175 e-value: 3.2E-73 score: 243.6
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 4..192
IPR018192	Ribosomal protein S5, N-terminal, conserved site	PROSITE	PS00585	RIBOSOMAL_S5	coord: 35..67
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 94..173

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig1011	contig	M-pyrifera_M_contig1011:376..5412 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig1011.234.1	mRNA_M-pyrifera_M_contig1011.234.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig1011 150..5583 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig1011.234.1 ID=prot_M-pyrifera_M_contig1011.234.1|Name=mRNA_M-pyrifera_M_contig1011.234.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=201bp
MAIKAEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDEN
GHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKV
TGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLG
NFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAKNPTPKAAEA
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013810	Ribosomal_S5_N
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR005324	Ribosomal_S5_C
IPR005711	Ribosomal_S5_euk/arc
IPR000851	Ribosomal_S5
IPR018192	Ribosomal_S5_N_CS
IPR020568	Ribosomal_S5_D2-typ_fold