mRNA_M-pyrifera_M_contig99159.22810.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99159.22810.1 vs. uniprot
Match: L8HCN7_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HCN7_ACACA) HSP 1 Score: 102 bits (254), Expect = 1.930e-23 Identity = 49/112 (43.75%), Postives = 68/112 (60.71%), Query Frame = 1 Query: 1 GFHRVLQQWTTVTEMYTCSHFVDVRGKVNIGAHGKKIPMRKGSAVVWSSSLPHCNYPNDSDQFRFCQYVRMFPAAVLPES-PNLHRARAAAVCAAQPEDFSPSPLGKKLFGL 333 G+H+ L+ W T ++ FV V + + H +KI RKGS VVWSS +PHCNYPN FRF QY++MFPA V+P + ++ RA + P+ F PS LG+ +FGL Sbjct: 265 GYHKFLETWAKQTPIFNKGSFVYVPKEDPLREHSQKITARKGSLVVWSSRMPHCNYPNTGPNFRFVQYLKMFPAVVMPPTNSSIWSVRAQVLRHRLPQGFEPSELGQLVFGL 376
BLAST of mRNA_M-pyrifera_M_contig99159.22810.1 vs. uniprot
Match: A0A7S4K3M7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4K3M7_9EUKA) HSP 1 Score: 85.1 bits (209), Expect = 4.970e-17 Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 1 GFHRVLQQWTTVTEMYTCSHFVDVRGKVNIGAHGKKIPMRKGSAVVWSSSLPHCNYPNDSDQFRFCQYVRMFPAAVLPESPNLHRARAAAVCAAQPEDFSPSPLGKKLFGL 333 GF ++L++W + F+ + + I R+GS +VWSS LPHCNYPN S+ FRF QY++MFP+ ++ + RA AV P+D+ S +G + G+ Sbjct: 285 GFQKILKEWAKQNRKASSMSFIQINKTDEMIEKATPITARRGSFIVWSSELPHCNYPNKSENFRFAQYIKMFPSKMVEDKEG----RAQAVKMRLPKDYVVSEVGMQTLGM 391
BLAST of mRNA_M-pyrifera_M_contig99159.22810.1 vs. uniprot
Match: D2V6L9_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V6L9_NAEGR) HSP 1 Score: 79.0 bits (193), Expect = 8.430e-15 Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 61 FVDVRGKVNIGAHGKKIPMRKGSAVVWSSSLPHCNYPNDSDQFRFCQYVRMFPAAVLPESPNLHRARAAAVCAAQPEDFSPSPLGKKLFGL 333 F+ VR + + + +K+P+RKGS ++++S LPH N+PN SD+FR CQY++M P S R RA V +DF P+ +GK++FG Sbjct: 338 FLSVRKEDPLISQTQKVPVRKGSLIIFNSLLPHANFPNSSDRFRVCQYIKMVPKK---GSEEFQRLRATMVHDLMSQDFVPNEIGKEVFGF 425
BLAST of mRNA_M-pyrifera_M_contig99159.22810.1 vs. uniprot
Match: A0A024UQ82_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQ82_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 7.150e-14 Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 58 HFVDVRGKVNIGAHGKKIPMRKGSAVVWSSSLPHCNYPNDSDQFRFCQYVRMFPAAVLPESPNLHRARAAAVCAAQ--PEDFSPSPLGKKLFGL 333 +F++V ++ KIPM+ GS ++W+S LPH N+PND FR QYV+M P A P + ++ A+ P DF+P+PLG KLFGL Sbjct: 244 NFIEVPEDDDMRREITKIPMKAGSLLIWNSQLPHGNFPNDGFNFRMVQYVKMIPTADTEFRPAMQLSK---FDRAEWFPSDFTPTPLGNKLFGL 334
BLAST of mRNA_M-pyrifera_M_contig99159.22810.1 vs. uniprot
Match: A0A2D4C748_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C748_PYTIN) HSP 1 Score: 74.3 bits (181), Expect = 2.790e-13 Identity = 38/94 (40.43%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 58 HFVDVRGKVNIGAHGKKIPMRKGSAVVWSSSLPHCNYPNDSDQFRFCQYVRMFPAAVLPESPNLHRARAAAVCAAQPEDFSPSPLGKKLFGLPD 339 +F++V + K+IPM+ GS ++W+S LPH N+PN FR QY++M PA E + + A P D+SPS LG+KLFGL D Sbjct: 248 NFIEVPDDDPMRQEIKRIPMKAGSLLIWNSQLPHGNFPNTGFDFRMVQYIKMIPADDPREFRPAMQLQKFESSAWFPSDYSPSSLGRKLFGLDD 341
BLAST of mRNA_M-pyrifera_M_contig99159.22810.1 vs. uniprot
Match: UPI001CFF0B11 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFF0B11) HSP 1 Score: 73.9 bits (180), Expect = 4.970e-13 Identity = 41/116 (35.34%), Postives = 65/116 (56.03%), Query Frame = 1 Query: 1 GFHRVLQQW----TTVTEMYTCSHFVDVRGKVNIGAHGKKIPMRKGSAVVWSSSLPHCNYPNDSDQFRFCQYVRMFPAAVLPESPNLHRARAAAVCA-AQPEDFSPSPLGKKLFGL 333 GFH +++ T + C+ F+ V N+ + +K+P + GS +VW++ LPH NYPN SD+FR CQY++M P S + + RA + A+ F+PS GK++FG Sbjct: 309 GFHNHAKEYAEKLTAIRPGPKCT-FLSVFKGDNLLSQTQKVPAKAGSLIVWNTLLPHANYPNHSDRFRICQYIKMIPKK---GSESFQKLRATKIEEHARAYSFAPSETGKQVFGF 420
BLAST of mRNA_M-pyrifera_M_contig99159.22810.1 vs. uniprot
Match: A0A6A5BG88_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BG88_NAEFO) HSP 1 Score: 72.0 bits (175), Expect = 2.390e-12 Identity = 40/116 (34.48%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 1 GFHRVLQQW----TTVTEMYTCSHFVDVRGKVNIGAHGKKIPMRKGSAVVWSSSLPHCNYPNDSDQFRFCQYVRMFPAAVLPESPNLHRARAAAVCA-AQPEDFSPSPLGKKLFGL 333 GFH Q++ +++ C+ RG N+ +K+P + GS +VW++ LPH NYPN S++FR CQY++M P S + + RA+ + A+ F PS GK++FG Sbjct: 310 GFHNHAQEYVEKLSSIRPGPKCTFLSVFRGD-NLLTQTQKVPAKAGSLIVWNTLLPHANYPNHSERFRICQYIKMIPRK---GSESFQKLRASKIQEHARHFSFVPSETGKQVFGF 421
BLAST of mRNA_M-pyrifera_M_contig99159.22810.1 vs. uniprot
Match: D2VY01_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VY01_NAEGR) HSP 1 Score: 69.7 bits (169), Expect = 1.430e-11 Identity = 35/119 (29.41%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 4 FHRVLQQWTTVTEMYTCSHFVDV------RGKVNIGAHGKKIPMRKGSAVVWSSSLPHCNYPNDSDQFRFCQYVRMFPA---AVLPESPNLHRARAAAVCAAQPEDFSPSPLGKKLFGL 333 F+++ ++WT +T + +VD R + + +IP++ G ++W +PH + PN+SD++R CQ+++MFP+ + +L R A + +P+PLG KLFGL Sbjct: 262 FNKIFKEWTQLTRNTLANKYVDSSFVVLSRQEKELFNKAVRIPLKAGDMLIWDICMPHGSAPNESDRYRLCQFLKMFPSYKPTTKQGNSSLEIRRKIIRKALERYRMNPTPLGNKLFGL 380
BLAST of mRNA_M-pyrifera_M_contig99159.22810.1 vs. uniprot
Match: A0A7S3ZDQ0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZDQ0_9EUKA) HSP 1 Score: 65.9 bits (159), Expect = 5.950e-11 Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 1 Query: 94 AHGKKIPMRKGSAVVWSSSLPHCNYPNDSDQFRFCQYVRMFPAAVLPESPNLHRARAAAVCAAQPEDFSPSPLGKKLFGL 333 AH + P+R+GS ++W S +PHC +PN S + R QY++M P P LH A P DF+P+ LGKK++G Sbjct: 100 AHVQTCPVREGSLLIWDSRIPHCTFPNKSQRGRMIQYIKMAPVDDKAIQP-LH----APYPGLLPPDFTPTELGKKIYGF 174
BLAST of mRNA_M-pyrifera_M_contig99159.22810.1 vs. uniprot
Match: K0S8J8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S8J8_THAOC) HSP 1 Score: 67.8 bits (164), Expect = 6.530e-11 Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = 1 Query: 58 HFVDVRGKVNIGAHGKKIPMRKGSAVVWSSSLPHCNYPNDSDQ-FRFCQYVRMFPAAVLPE-SPNLHRARAAAV----CAAQPEDFSPSPLGKKLFGLPD 339 +F++V + + H KK+PM +GS ++W+S LPH N+PN S++ FR QY++M P E P + AR + E F+PS LG+ LFGL D Sbjct: 248 NFIEVPREDTMRRHVKKVPMPRGSLLIWNSMLPHGNFPNSSNEHFRMVQYIKMIPRNDPREFEPAMTSARFHESDWFPTEPEAEGFAPSKLGRCLFGLDD 347 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99159.22810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99159.22810.1 >prot_M-pyrifera_M_contig99159.22810.1 ID=prot_M-pyrifera_M_contig99159.22810.1|Name=mRNA_M-pyrifera_M_contig99159.22810.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=117bp GFHRVLQQWTTVTEMYTCSHFVDVRGKVNIGAHGKKIPMRKGSAVVWSSSback to top mRNA from alignment at M-pyrifera_M_contig99159:2..352+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99159.22810.1 ID=mRNA_M-pyrifera_M_contig99159.22810.1|Name=mRNA_M-pyrifera_M_contig99159.22810.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=351bp|location=Sequence derived from alignment at M-pyrifera_M_contig99159:2..352+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99159:2..352+ >mRNA_M-pyrifera_M_contig99159.22810.1 ID=mRNA_M-pyrifera_M_contig99159.22810.1|Name=mRNA_M-pyrifera_M_contig99159.22810.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig99159:2..352+ (Macrocystis pyrifera P11B4 male)back to top |