mRNA_M-pyrifera_M_contig99052.22783.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99052.22783.1 vs. uniprot
Match: A0A383XRF4_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A383XRF4_9GAMM) HSP 1 Score: 290 bits (742), Expect = 7.020e-94 Identity = 138/226 (61.06%), Postives = 170/226 (75.22%), Query Frame = 1 Query: 7 VLWRARVEISAARKEHSLRLQALEQTLAAATVRRDTEQGVVDGSWSGTRKFRIARKQIEAQDICSFYLVSHDGKALAPFSPGQFLTFSLRLPARPQPLIRCYSLSDSPFERDHYRVSIKRLGPPPQQPDLPPGLSSNHFHQNLNEGDIVDVKAPGGSFFLDLDQRRPVVLIAGGVGVTPVFSMLKAACAADYGQEIWFFYGVRQGGEHAFREEMEQCEAQHSNVKL 684 VL RAR + + AR+ H RLQ L+ LA A VR + VD WSGTRKFRI RK E+ + SFYL+ HDGKAL PF PGQFLTF L+LP R +PL+RCYSLSDSP E HYR+S+KRL PPP+ PD PPGLSSN H+ ++EG+I+DVKAP G FFLDL++RRPVVLI GGVG+TPVFSMLKAACAA Y QEIWFF G R G + ++++++ EA H N+++ Sbjct: 28 VLLRARSDAAMARRYHDQRLQQLDLELATAAVRHRSAVRAVDAGWSGTRKFRIERKVPESDSVTSFYLIPHDGKALPPFKPGQFLTFQLKLPDRAKPLVRCYSLSDSPSETGHYRISVKRLDPPPKAPDAPPGLSSNFLHREVSEGEILDVKAPAGDFFLDLEERRPVVLIGGGVGITPVFSMLKAACAAGYDQEIWFFSGARFGADQIYQDDLKALEAAHDNLRV 253
BLAST of mRNA_M-pyrifera_M_contig99052.22783.1 vs. uniprot
Match: A0A2E3NNQ0_9GAMM (Uncharacterized protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A2E3NNQ0_9GAMM) HSP 1 Score: 284 bits (727), Expect = 1.370e-91 Identity = 135/227 (59.47%), Postives = 168/227 (74.01%), Query Frame = 1 Query: 4 AVLWRARVEISAARKEHSLRLQALEQTLAAATVRRDTEQGVVDGSWSGTRKFRIARKQIEAQDICSFYLVSHDGKALAPFSPGQFLTFSLRLPARPQPLIRCYSLSDSPFERDHYRVSIKRLGPPPQQPDLPPGLSSNHFHQNLNEGDIVDVKAPGGSFFLDLDQRRPVVLIAGGVGVTPVFSMLKAACAADYGQEIWFFYGVRQGGEHAFREEMEQCEAQHSNVKL 684 + L +AR + + AR H RL+ L+Q LA A +R +G WSG+RKFR+ARK E+ + SFYLV HDGKAL F PGQFLTF L+LP R +PL+RCYSLSDSP E DHYR+S+KRL PPP+ P+ PPGLSSN H + EG+I+DVKAP G FFLDL++RRPVVLI GGVG+TPVFSMLKAACAA Y QEIWFF G R G E +++++ EA+H NV++ Sbjct: 27 SALLQARRDAARARTVHDQRLRLLDQQLAGAAAKRQLAVRDAEGGWSGSRKFRVARKVPESDTVTSFYLVPHDGKALPAFKPGQFLTFQLKLPDRAKPLVRCYSLSDSPSEPDHYRISVKRLDPPPKNPEAPPGLSSNFLHLQVQEGEILDVKAPAGDFFLDLEERRPVVLIGGGVGITPVFSMLKAACAAGYDQEIWFFSGARFGAEQIYKDDLRALEAEHENVRV 253
BLAST of mRNA_M-pyrifera_M_contig99052.22783.1 vs. uniprot
Match: A0A2S6RW07_9PROT (Flavohemoprotein n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A2S6RW07_9PROT) HSP 1 Score: 251 bits (640), Expect = 1.960e-78 Identity = 121/215 (56.28%), Postives = 149/215 (69.30%), Query Frame = 1 Query: 40 ARKEHSLRLQALEQTLAAATVRRDTEQGVVDGSWSGTRKFRIARKQIEAQDICSFYLVSHDGKALAPFSPGQFLTFSLRLPARPQPLIRCYSLSDSPFERDHYRVSIKRLGPPPQQPDLPPGLSSNHFHQNLNEGDIVDVKAPGGSFFLDLDQRRPVVLIAGGVGVTPVFSMLKAACAADYGQEIWFFYGVRQGGEHAFREEMEQCEAQHSNVKL 684 AR + L LQ L++ + A T+ E+ +WSG RKFRI RK E I SFYLV HDGK + F PGQ+LTFSLRLP R +PL+RCYSLSD +R+HYRVSIKR PP + P+ PPG+SS+ FH LNEGDIVDVKAP G+F+LD+ + PVVLI GG+G+TP+ SML C +D +E W FYGVR G EH RE + Q EA+H NV L Sbjct: 39 ARSQQELSLQLLKRRVEAETLHGQMERDKGSSTWSGLRKFRINRKVPEGGGISSFYLVPHDGKEIPQFDPGQYLTFSLRLPDREKPLVRCYSLSDGSLQREHYRVSIKRADPPRKAPEAPPGVSSSFFHNALNEGDIVDVKAPSGNFYLDISKHTPVVLIGGGIGLTPMLSMLNTLCESDSQRETWLFYGVRNGEEHIMREHLAQLEAEHENVHL 253
BLAST of mRNA_M-pyrifera_M_contig99052.22783.1 vs. uniprot
Match: A0A369TA73_9PROT (Uncharacterized protein n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369TA73_9PROT) HSP 1 Score: 248 bits (632), Expect = 2.880e-77 Identity = 113/192 (58.85%), Postives = 141/192 (73.44%), Query Frame = 1 Query: 109 DTEQGVVDGSWSGTRKFRIARKQIEAQDICSFYLVSHDGKALAPFSPGQFLTFSLRLPARPQPLIRCYSLSDSPFERDHYRVSIKRLGPPPQQPDLPPGLSSNHFHQNLNEGDIVDVKAPGGSFFLDLDQRRPVVLIAGGVGVTPVFSMLKAACAADYGQEIWFFYGVRQGGEHAFREEMEQCEAQHSNVKL 684 + E+ + SW+G RKF I RK +EA DICSFYL HD K L PF PGQ+LTF LR+P +P+P++RCYSLSD P D YRV+IKRL PP +P+ PPGLSS++FHQ+L EGDIVDV+AP G F+LD +PVVLI GGVG+TP+ SML C G+E WFFYGVR GGEHAF+E ++Q + H NV + Sbjct: 57 EAERAKKELSWTGLRKFTIERKVMEANDICSFYLKPHDHKPLPPFRPGQYLTFQLRIPDQPKPVVRCYSLSDGPVNLDRYRVTIKRLPPPRDKPEAPPGLSSSYFHQSLQEGDIVDVRAPNGHFYLDESTDKPVVLIGGGVGLTPMLSMLNTICETGSGRETWFFYGVRHGGEHAFKEHLQQIDRNHPNVHV 248
BLAST of mRNA_M-pyrifera_M_contig99052.22783.1 vs. uniprot
Match: A0A2E4F4M5_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4F4M5_9PROT) HSP 1 Score: 246 bits (627), Expect = 1.760e-76 Identity = 121/228 (53.07%), Postives = 156/228 (68.42%), Query Frame = 1 Query: 1 IAVLWRARVEISAARKEHSLRLQALEQTLAAATVRRDTEQGVVDGSWSGTRKFRIARKQIEAQDICSFYLVSHDGKALAPFSPGQFLTFSLRLPARPQPLIRCYSLSDSPFERDHYRVSIKRLGPPPQQPDLPPGLSSNHFHQNLNEGDIVDVKAPGGSFFLDLDQRRPVVLIAGGVGVTPVFSMLKAACAADYGQEIWFFYGVRQGGEHAFREEMEQCEAQHSNVKL 684 +A+L+ + AR + L L+ L++ + A T++R+ E+ SWSG RKFRI RK E I SFYLV HDGK + F PGQ+LTFSLR+P R +PL+RCYSLSDSP ++ YRVSIKR PP Q PD P GLSS FH +LN+GDIVDVKAP G+FFLD+ + PVVLI GG+G+TP+ SML A C + +E W FYGVR G EH E + + EA++ +V L Sbjct: 26 LALLFSTWRSVVYARDQQELALKLLQRRVEAETLQREIEREKGTSSWSGLRKFRIDRKVAEGGGIASFYLVPHDGKEIPQFEPGQYLTFSLRVPEREKPLVRCYSLSDSPLQKSSYRVSIKRADPPRQNPDAPAGLSSTFFHNSLNQGDIVDVKAPSGNFFLDMSKHTPVVLIGGGIGLTPMLSMLNALCDSGSQRETWLFYGVRNGEEHIVSEHLARMEAENEHVHL 253
BLAST of mRNA_M-pyrifera_M_contig99052.22783.1 vs. uniprot
Match: UPI00187B8775 (2Fe-2S iron-sulfur cluster-binding protein n=1 Tax=Sneathiella sp. P13V-1 TaxID=2697366 RepID=UPI00187B8775) HSP 1 Score: 243 bits (620), Expect = 1.680e-75 Identity = 113/210 (53.81%), Postives = 147/210 (70.00%), Query Frame = 1 Query: 58 LRLQALEQTLAAATVRRDTEQGVVDGSWSGTRKFRIARKQIEAQDICSFYLVSHDGKALAPFSPGQFLTFSLRLPARPQPLIRCYSLSDSPFERDHYRVSIKRLGPPPQQPDLPPGLSSNHFHQNLNEGDIVDVKAPGGSFFLDLDQRRPVVLIAGGVGVTPVFSMLKAACAADYGQEIWFFYGVRQGGEHAFREEMEQCEAQHSNVKLR 687 L L+ +E+ + A+ + + V +W+G RKFR+ +K E DICSFYLV H G+ L PF PGQ+LTF L++ + +PL RCYSLSD D+YRVSIKR+ PPP QP+LPPG SSN+FH + EGDI+DVKAP G+F+LD+ + PVVLI GGVG+TPV SML A C + +E+WFFYGVR G EH +E +EQ +H NV LR Sbjct: 45 LALREMEEKVELASAAAASSRSQVSLTWNGVRKFRVEKKIQEGGDICSFYLVPHSGRGLPPFKPGQYLTFQLKMDGQDKPLTRCYSLSDCSANPDYYRVSIKRVPPPPNQPELPPGKSSNYFHDQVQEGDILDVKAPSGNFYLDMTKNTPVVLIGGGVGITPVLSMLNAICDSGSKREVWFFYGVRFGTEHVMKEHLEQIAQEHDNVHLR 254
BLAST of mRNA_M-pyrifera_M_contig99052.22783.1 vs. uniprot
Match: A0A2E6QI00_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QI00_9PROT) HSP 1 Score: 239 bits (611), Expect = 4.700e-74 Identity = 111/183 (60.66%), Postives = 141/183 (77.05%), Query Frame = 1 Query: 136 SWSGTRKFRIARKQIEAQDICSFYLVSHDGKALAPFSPGQFLTFSLRLPARPQPLIRCYSLSDSPFERDHYRVSIKRLGPPPQQPDLPPGLSSNHFHQNLNEGDIVDVKAPGGSFFLDLDQRRPVVLIAGGVGVTPVFSMLKAACAADYGQEIWFFYGVRQGGEHAFREEMEQCEAQHSNVKL 684 SW+G RKF+IARK +E ICSFYL HD + L PFSPGQFLTF L +P +P+P+IRCYSLSDSP D+YRVSIKR+ PP +PD+PPGLSSN FH++LNEGDI+DVKAPGGSF+LD+ ++ PVVLI GGVG+TPV SM+ A + +E +FFYGVR G E +E +E+ A++ N+ L Sbjct: 74 SWNGYRKFQIARKVMEGGGICSFYLAPHDSRPLPPFSPGQFLTFQLHIPGQPKPVIRCYSLSDSPNHPDYYRVSIKRVPPPRDKPDVPPGLSSNFFHESLNEGDILDVKAPGGSFYLDMTKQTPVVLIGGGVGLTPVLSMVNAIVESGSKREAYFFYGVRNGEEAVMKEHLERLAAENENIHL 256
BLAST of mRNA_M-pyrifera_M_contig99052.22783.1 vs. uniprot
Match: A0A2E8VHN1_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8VHN1_9GAMM) HSP 1 Score: 231 bits (589), Expect = 6.280e-71 Identity = 114/225 (50.67%), Postives = 149/225 (66.22%), Query Frame = 1 Query: 10 LWRARVEISAARKEHSLRLQALEQTLAAATVRRDTEQGVVDGSWSGTRKFRIARKQIEAQDICSFYLVSHDGKALAPFSPGQFLTFSLRLPARPQPLIRCYSLSDSPFERDHYRVSIKRLGPPPQQPDLPPGLSSNHFHQNLNEGDIVDVKAPGGSFFLDLDQRRPVVLIAGGVGVTPVFSMLKAACAADYGQEIWFFYGVRQGGEHAFREEMEQCEAQHSNVKL 684 L + ++ S R+ + L+L L + L A + R+ EQ V+D WSG RKF+IA+K E I SFY V HDGK L PF PGQ+LTFSL++ +P++RCYSLSDS +RD+YR S+KR+ P G +S HFH NL EGDIVDVKAP GSF+LD+ + PVVLI GGVG+TPV SMLK+ A +E+WF YGVR EH +E+ Q +A + NV+L Sbjct: 24 LMKGWLQFSGQREANDLKLAILNERLQFAAMTRNAEQKVLDHGWSGLRKFKIAKKIPEGGSISSFYFVPHDGKPLPPFQPGQYLTFSLKVEGHQRPVVRCYSLSDSALQRDYYRASVKRVSPS--------GAASGHFHDNLEEGDIVDVKAPSGSFYLDMSEHSPVVLIGGGVGITPVLSMLKSIVDAGSKREVWFLYGVRNRQEHIMFDELRQIDADNENVRL 240
BLAST of mRNA_M-pyrifera_M_contig99052.22783.1 vs. uniprot
Match: A0A2E9E153_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9E153_9PROT) HSP 1 Score: 231 bits (590), Expect = 6.470e-71 Identity = 114/213 (53.52%), Postives = 142/213 (66.67%), Query Frame = 1 Query: 40 ARKEHSLRLQALEQTLAAATVRRDTEQGVVDGSWSGTRKFRIARKQIEAQDICSFYLVSHDGKALAPFSPGQFLTFSLRLPARPQPLIRCYSLSDSPFERDHYRVSIKRLGPPPQQPDLPPGLSSNHFHQNLNEGDIVDVKAPGGSFFLDLDQRRPVVLIAGGVGVTPVFSMLKAACAADYGQEIWFFYGVRQGGEHAFREEMEQCEAQHSNV 678 AR + L LQAL + A + Q +WSG RKFR+ R EA+DI SFYLV HDGK F PGQ+LTFSL+ +PLIRCYSLSDSPF+ DHYR+SIKRL PPP ++ PGLSSN FH+ + E DIVDVKAP G+F LDL + +PVVLI GG+GVTP+ SML+ C D G+ W FYG+R E+ R+ ++ AQ+ NV Sbjct: 40 ARAQQKLNLQALRTRVLAEVKQEQLTQEAAATTWSGFRKFRVRRISDEARDIKSFYLVPHDGKPFPRFQPGQYLTFSLKRREIEKPLIRCYSLSDSPFQNDHYRISIKRLDPPPDTANIEPGLSSNFFHREVAEDDIVDVKAPSGNFTLDLSRNKPVVLIGGGIGVTPMLSMLEGICETDSGRXCWLFYGIRXSDEYIMRDRIKGLAAQNKNV 252
BLAST of mRNA_M-pyrifera_M_contig99052.22783.1 vs. uniprot
Match: A0A3D5DCU4_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DCU4_9GAMM) HSP 1 Score: 231 bits (588), Expect = 1.010e-70 Identity = 108/227 (47.58%), Postives = 150/227 (66.08%), Query Frame = 1 Query: 4 AVLWRARVEISAARKEHSLRLQALEQTLAAATVRRDTEQGVVDGSWSGTRKFRIARKQIEAQDICSFYLVSHDGKALAPFSPGQFLTFSLRLPARPQPLIRCYSLSDSPFERDHYRVSIKRLGPPPQQPDLPPGLSSNHFHQNLNEGDIVDVKAPGGSFFLDLDQRRPVVLIAGGVGVTPVFSMLKAACAADYGQEIWFFYGVRQGGEHAFREEMEQCEAQHSNVKL 684 A++ + ++AA+++ L L L+ + T+R ++ + WSG RKF +A++ E +ICSFYL HDG+ + F GQ+LTF L++P + +P+ RCYSLSDS DHYRVSIKR G PP PD PPG++S+HFHQ +NEGDIVDVKAP G+F LDL + P+VLI GGVGVTP+ SML + +E+WFFYGVR G E + + AQ+ N++L Sbjct: 23 AIIKEMMISLAAAKQQTELELAVLKLKVEEHTLRLQGKREKLAAGWSGIRKFTVAKRVDEGGEICSFYLKPHDGRPIPSFDSGQYLTFELKVPGKGKPVTRCYSLSDSALNDDHYRVSIKRAGAPPTNPDAPPGVASDHFHQRINEGDIVDVKAPAGNFCLDLSKTNPIVLIGGGVGVTPMLSMLNTLVDSGSRREVWFFYGVRHGNEQIMKAHLSGLAAQYDNLRL 249 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99052.22783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99052.22783.1 >prot_M-pyrifera_M_contig99052.22783.1 ID=prot_M-pyrifera_M_contig99052.22783.1|Name=mRNA_M-pyrifera_M_contig99052.22783.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp IAVLWRARVEISAARKEHSLRLQALEQTLAAATVRRDTEQGVVDGSWSGTback to top mRNA from alignment at M-pyrifera_M_contig99052:6..692- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99052.22783.1 ID=mRNA_M-pyrifera_M_contig99052.22783.1|Name=mRNA_M-pyrifera_M_contig99052.22783.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=687bp|location=Sequence derived from alignment at M-pyrifera_M_contig99052:6..692- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99052:6..692- >mRNA_M-pyrifera_M_contig99052.22783.1 ID=mRNA_M-pyrifera_M_contig99052.22783.1|Name=mRNA_M-pyrifera_M_contig99052.22783.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1374bp|location=Sequence derived from alignment at M-pyrifera_M_contig99052:6..692- (Macrocystis pyrifera P11B4 male)back to top |